Experiment set6S45 for Bosea sp. OAE506

Compare to:

R2A with 3-octanone 5.31033333333333 mM

200 most important genes:

  gene name fitness t score description  
ABIE41_RS00410 -5.6 -16.7 complex I NDUFA9 subunit family protein compare
ABIE41_RS06120 -5.4 -3.7 YggT family protein compare
ABIE41_RS08370 -5.1 -3.0 metal ABC transporter permease compare
ABIE41_RS08365 -5.0 -3.4 metal ABC transporter permease compare
ABIE41_RS23125 -4.6 -3.1 DUF4170 domain-containing protein compare
ABIE41_RS04800 -4.5 -16.0 Bax inhibitor-1/YccA family protein compare
ABIE41_RS04215 -4.5 -5.4 2-polyprenylphenol 6-hydroxylase compare
ABIE41_RS04845 -4.3 -5.3 septation protein A compare
ABIE41_RS17745 -4.2 -4.1 endolytic transglycosylase MltG compare
ABIE41_RS02845 -4.1 -2.8 glycosyltransferase family 2 protein compare
ABIE41_RS05630 -4.1 -2.8 RNA polymerase sigma factor RpoH compare
ABIE41_RS07535 -4.1 -3.9 glucose-6-phosphate isomerase compare
ABIE41_RS08360 -4.1 -3.9 manganese/iron ABC transporter ATP-binding protein compare
ABIE41_RS04280 -3.8 -5.1 SCO family protein compare
ABIE41_RS03615 -3.8 -3.6 lysylphosphatidylglycerol synthase domain-containing protein compare
ABIE41_RS08705 -3.7 -3.4 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE41_RS01450 -3.6 -7.3 copper chaperone PCu(A)C compare
ABIE41_RS22440 -3.5 -7.6 PAS domain-containing sensor histidine kinase compare
ABIE41_RS08355 -3.5 -7.0 metal ABC transporter substrate-binding protein compare
ABIE41_RS16185 -3.5 -4.0 type II 3-dehydroquinate dehydratase compare
ABIE41_RS16125 -3.3 -9.9 RNA degradosome polyphosphate kinase compare
ABIE41_RS08755 -3.2 -4.3 TlpA disulfide reductase family protein compare
ABIE41_RS04425 -3.2 -8.6 5-aminolevulinate synthase compare
ABIE41_RS03095 -3.1 -3.7 phosphomannomutase compare
ABIE41_RS22475 -3.0 -1.4 hypothetical protein compare
ABIE41_RS04230 -2.9 -14.0 AMP nucleosidase compare
ABIE41_RS15740 -2.8 -7.1 triose-phosphate isomerase compare
ABIE41_RS00165 -2.8 -5.2 tRNA pseudouridine(38-40) synthase TruA compare
ABIE41_RS11480 -2.8 -2.2 outer membrane protein compare
ABIE41_RS10395 -2.7 -3.6 ABC transporter permease compare
ABIE41_RS17045 -2.6 -2.5 phosphoribosylglycinamide formyltransferase compare
ABIE41_RS23965 -2.6 -5.4 microcin C ABC transporter permease YejB compare
ABIE41_RS16205 -2.6 -6.4 DUF2155 domain-containing protein compare
ABIE41_RS02880 -2.4 -7.9 glycosyltransferase compare
ABIE41_RS02870 -2.4 -9.1 rhamnan synthesis F family protein compare
ABIE41_RS16150 -2.4 -3.4 penicillin-binding protein 1A compare
ABIE41_RS19890 -2.4 -9.2 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE41_RS05860 -2.4 -8.2 hypothetical protein compare
ABIE41_RS23985 -2.3 -8.9 ABC transporter ATP-binding protein compare
ABIE41_RS17575 -2.3 -7.4 RIP metalloprotease RseP compare
ABIE41_RS04995 -2.3 -2.0 DsbE family thiol:disulfide interchange protein compare
ABIE41_RS22950 -2.3 -9.2 cytochrome c oxidase subunit I compare
ABIE41_RS07880 -2.2 -2.4 primosomal protein N' compare
ABIE41_RS22525 -2.2 -7.3 4'-phosphopantetheinyl transferase superfamily protein compare
ABIE41_RS16810 -2.1 -6.8 type II toxin-antitoxin system RatA family toxin compare
ABIE41_RS22480 -2.1 -5.4 superoxide dismutase compare
ABIE41_RS19130 -2.1 -2.7 single-stranded-DNA-specific exonuclease RecJ compare
ABIE41_RS19810 -2.1 -5.7 winged helix DNA-binding protein compare
ABIE41_RS23970 -2.1 -6.2 ABC transporter permease compare
ABIE41_RS13930 -2.1 -4.3 zinc-finger domain-containing protein compare
ABIE41_RS22775 -2.1 -3.8 tetratricopeptide repeat protein compare
ABIE41_RS05305 -2.0 -3.8 M48 family metalloprotease compare
ABIE41_RS08610 -2.0 -5.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE41_RS22955 -2.0 -2.4 heme o synthase compare
ABIE41_RS04910 -1.9 -3.0 DUF1223 domain-containing protein compare
ABIE41_RS09345 -1.9 -7.3 ABC transporter transmembrane domain-containing protein compare
ABIE41_RS12480 -1.9 -7.8 methionine synthase compare
ABIE41_RS10525 -1.9 -5.0 NAD-dependent epimerase compare
ABIE41_RS17040 -1.9 -6.7 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE41_RS10185 -1.9 -14.1 Pls/PosA family non-ribosomal peptide synthetase compare
ABIE41_RS21860 -1.9 -5.2 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE41_RS11115 -1.8 -4.9 metallophosphoesterase compare
ABIE41_RS11005 -1.8 -4.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
ABIE41_RS21625 -1.8 -7.5 methylmalonyl-CoA mutase compare
ABIE41_RS09695 -1.8 -3.5 folate-binding protein YgfZ compare
ABIE41_RS02715 -1.8 -3.3 nucleotidyltransferase family protein compare
ABIE41_RS16085 -1.8 -3.6 CatB-related O-acetyltransferase compare
ABIE41_RS12865 -1.8 -9.8 DegQ family serine endoprotease compare
ABIE41_RS19940 -1.8 -3.1 orotate phosphoribosyltransferase compare
ABIE41_RS17810 -1.7 -8.3 amidophosphoribosyltransferase compare
ABIE41_RS04935 -1.7 -4.2 SDR family oxidoreductase compare
ABIE41_RS01605 -1.7 -2.6 TetR/AcrR family transcriptional regulator compare
ABIE41_RS07230 -1.7 -6.6 cyclic nucleotide-binding domain-containing protein compare
ABIE41_RS04950 -1.6 -2.2 3-hydroxyacyl-ACP dehydratase FabZ family protein compare
ABIE41_RS03310 -1.6 -3.4 penicillin-binding protein activator compare
ABIE41_RS19275 -1.6 -4.8 COX15/CtaA family protein compare
ABIE41_RS18155 -1.6 -1.8 50S ribosomal protein L33 compare
ABIE41_RS16050 -1.5 -4.2 glycosyltransferase family 39 protein compare
ABIE41_RS04195 -1.5 -3.9 enoyl-CoA hydratase compare
ABIE41_RS22125 -1.5 -3.2 ATP phosphoribosyltransferase regulatory subunit compare
ABIE41_RS13220 -1.5 -1.7 TetR/AcrR family transcriptional regulator compare
ABIE41_RS22970 -1.5 -5.1 cytochrome c oxidase subunit 3 compare
ABIE41_RS22945 -1.4 -6.5 cytochrome c oxidase subunit II compare
ABIE41_RS16040 -1.4 -3.7 lipid-A-disaccharide synthase N-terminal domain-containing protein compare
ABIE41_RS10390 -1.4 -3.4 ABC transporter permease compare
ABIE41_RS13020 -1.4 -3.4 TRAP transporter small permease subunit compare
ABIE41_RS12850 -1.4 -7.8 FtsH protease activity modulator HflK compare
ABIE41_RS04780 -1.4 -7.8 NAD-glutamate dehydrogenase compare
ABIE41_RS00110 -1.4 -7.1 fumarate hydratase compare
ABIE41_RS13025 -1.4 -7.1 TRAP transporter large permease subunit compare
ABIE41_RS10015 -1.3 -3.7 transcriptional regulator PpsR compare
ABIE41_RS11200 -1.3 -4.2 cytochrome c1 compare
ABIE41_RS04920 -1.3 -3.8 zinc-binding dehydrogenase compare
ABIE41_RS04940 -1.3 -3.6 beta-ketoacyl-ACP synthase compare
ABIE41_RS08160 -1.3 -5.4 hypothetical protein compare
ABIE41_RS06285 -1.3 -5.8 pyruvate kinase compare
ABIE41_RS23330 -1.3 -2.6 SEL1-like repeat protein compare
ABIE41_RS02770 -1.3 -8.1 phosphomethylpyrimidine synthase ThiC compare
ABIE41_RS13965 -1.3 -1.2 hypothetical protein compare
ABIE41_RS03260 -1.3 -5.7 translation elongation factor 4 compare
ABIE41_RS12475 -1.2 -4.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE41_RS11195 -1.2 -6.6 cytochrome b/b6 compare
ABIE41_RS17025 -1.2 -3.4 hypothetical protein compare
ABIE41_RS16805 -1.2 -1.3 CinA family protein compare
ABIE41_RS10225 -1.2 -2.7 DnaJ C-terminal domain-containing protein compare
ABIE41_RS15065 -1.2 -1.4 DUF1127 domain-containing protein compare
ABIE41_RS10285 -1.2 -1.4 ChrR family anti-sigma-E factor compare
ABIE41_RS18650 -1.1 -4.1 TetR/AcrR family transcriptional regulator compare
ABIE41_RS09245 -1.1 -4.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE41_RS03850 -1.1 -3.9 TetR family transcriptional regulator compare
ABIE41_RS06180 -1.1 -8.6 peptide chain release factor 3 compare
ABIE41_RS24065 -1.1 -3.0 quinone-dependent dihydroorotate dehydrogenase compare
ABIE41_RS23280 -1.1 -4.6 TIGR01459 family HAD-type hydrolase compare
ABIE41_RS22250 -1.1 -1.4 FAD-binding oxidoreductase compare
ABIE41_RS19835 -1.1 -5.4 threonine ammonia-lyase compare
ABIE41_RS14110 -1.1 -4.8 hypothetical protein compare
ABIE41_RS11190 -1.1 -3.3 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE41_RS03720 -1.1 -1.7 Flp family type IVb pilin compare
ABIE41_RS15185 -1.1 -3.5 IMP dehydrogenase compare
ABIE41_RS00050 -1.1 -3.7 orotidine-5'-phosphate decarboxylase compare
ABIE41_RS15835 -1.1 -3.5 extracellular solute-binding protein compare
ABIE41_RS05385 -1.1 -1.1 hypothetical protein compare
ABIE41_RS07590 -1.1 -1.9 cold-shock protein compare
ABIE41_RS12405 -1.1 -2.9 MarR family transcriptional regulator compare
ABIE41_RS10235 -1.1 -1.7 pyridoxamine 5'-phosphate oxidase compare
ABIE41_RS16045 -1.1 -1.5 glycosyltransferase family 2 protein compare
ABIE41_RS22980 -1.1 -5.2 SURF1 family cytochrome oxidase biogenesis protein compare
ABIE41_RS10165 -1.1 -7.9 aspartate aminotransferase family protein compare
ABIE41_RS05840 -1.1 -5.9 glucan biosynthesis protein D compare
ABIE41_RS08470 -1.1 -3.5 iron response transcriptional regulator IrrA compare
ABIE41_RS19185 -1.0 -7.8 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE41_RS05000 -1.0 -5.3 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE41_RS12870 -1.0 -1.8 DHCW motif cupin fold protein compare
ABIE41_RS02725 -1.0 -4.9 double-strand break repair helicase AddA compare
ABIE41_RS11670 -1.0 -1.2 50S ribosomal protein L19 compare
ABIE41_RS10385 -1.0 -1.9 ABC transporter substrate-binding protein compare
ABIE41_RS04305 -1.0 -1.2 tRNA-Gly compare
ABIE41_RS10400 -1.0 -1.5 ABC transporter ATP-binding protein compare
ABIE41_RS03890 -1.0 -6.2 sodium:proton antiporter compare
ABIE41_RS03015 -1.0 -4.2 class I SAM-dependent methyltransferase compare
ABIE41_RS08415 -1.0 -1.1 NfeD family protein compare
ABIE41_RS17795 -1.0 -3.5 alanine racemase compare
ABIE41_RS00075 -1.0 -5.8 lysine-2,3-aminomutase-like protein compare
ABIE41_RS19270 -1.0 -5.2 O-acetylhomoserine aminocarboxypropyltransferase compare
ABIE41_RS16780 -1.0 -2.6 PAS domain-containing sensor histidine kinase compare
ABIE41_RS03070 -1.0 -3.4 class I SAM-dependent methyltransferase compare
ABIE41_RS15660 -1.0 -1.8 DUF2497 domain-containing protein compare
ABIE41_RS23160 -1.0 -3.2 phosphoribosylamine--glycine ligase compare
ABIE41_RS11735 -1.0 -1.4 hypothetical protein compare
ABIE41_RS22965 -0.9 -4.4 cytochrome c oxidase assembly protein compare
ABIE41_RS05635 -0.9 -3.5 RluA family pseudouridine synthase compare
ABIE41_RS11015 -0.9 -2.8 DUF1134 domain-containing protein compare
ABIE41_RS11505 -0.9 -1.2 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE41_RS17855 -0.9 -2.3 RidA family protein compare
ABIE41_RS05980 -0.9 -1.5 uracil-DNA glycosylase compare
ABIE41_RS05815 -0.9 -0.9 GTP-binding protein compare
ABIE41_RS11140 -0.9 -1.6 DUF58 domain-containing protein compare
ABIE41_RS03035 -0.9 -6.1 class I SAM-dependent methyltransferase compare
ABIE41_RS19375 -0.9 -3.0 N-acetylmuramidase domain-containing protein compare
ABIE41_RS12855 -0.9 -2.9 protease modulator HflC compare
ABIE41_RS04515 -0.9 -3.4 apolipoprotein N-acyltransferase compare
ABIE41_RS13660 -0.9 -2.1 flavin reductase family protein compare
ABIE41_RS05020 -0.9 -1.9 DUF1476 domain-containing protein compare
ABIE41_RS13905 -0.9 -3.7 hemolysin family protein compare
ABIE41_RS15670 -0.9 -1.9 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE41_RS04520 -0.8 -4.7 helix-turn-helix transcriptional regulator compare
ABIE41_RS04720 -0.8 -6.4 YggS family pyridoxal phosphate-dependent enzyme compare
ABIE41_RS22465 -0.8 -3.3 MucR family transcriptional regulator compare
ABIE41_RS07210 -0.8 -6.7 ABC transporter permease compare
ABIE41_RS24040 -0.8 -6.2 EAL domain-containing protein compare
ABIE41_RS14290 -0.8 -2.0 PP2C family serine/threonine-protein phosphatase compare
ABIE41_RS07215 -0.8 -6.8 ABC transporter permease compare
ABIE41_RS04490 -0.8 -3.2 lysophospholipid acyltransferase family protein compare
ABIE41_RS08305 -0.8 -2.3 homospermidine synthase compare
ABIE41_RS16140 -0.8 -1.0 AI-2E family transporter compare
ABIE41_RS04610 -0.8 -1.6 helix-turn-helix domain-containing protein compare
ABIE41_RS08905 -0.8 -3.3 phosphate signaling complex protein PhoU compare
ABIE41_RS18235 -0.8 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE41_RS21115 -0.8 -3.3 DUF971 domain-containing protein compare
ABIE41_RS09615 -0.8 -2.6 low affinity iron permease family protein compare
ABIE41_RS08995 -0.8 -1.7 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABIE41_RS04945 -0.8 -2.2 beta-ketoacyl-ACP synthase compare
ABIE41_RS16065 -0.8 -0.9 ETC complex I subunit compare
ABIE41_RS03875 -0.8 -2.4 ActR/PrrA/RegA family redox response regulator transcription factor compare
ABIE41_RS23450 -0.8 -3.6 peptide ABC transporter permease compare
ABIE41_RS06145 -0.8 -3.5 sigma-54 dependent transcriptional regulator compare
ABIE41_RS07220 -0.8 -6.9 dipeptide ABC transporter ATP-binding protein compare
ABIE41_RS08565 -0.8 -2.5 glutamate synthase large subunit compare
ABIE41_RS14430 -0.8 -1.6 hypothetical protein compare
ABIE41_RS08395 -0.8 -1.8 response regulator compare
ABIE41_RS00865 -0.7 -2.2 hypothetical protein compare
ABIE41_RS14070 -0.7 -2.2 phosphatase PAP2 family protein compare
ABIE41_RS14045 -0.7 -1.3 phosphoribosyl-AMP cyclohydrolase compare
ABIE41_RS03240 -0.7 -4.0 FAD-dependent oxidoreductase compare
ABIE41_RS03710 -0.7 -1.8 prepilin peptidase compare
ABIE41_RS04565 -0.7 -2.1 tRNA pseudouridine(55) synthase TruB compare
ABIE41_RS17435 -0.7 -1.9 gephyrin-like molybdotransferase Glp compare
ABIE41_RS13740 -0.7 -2.0 XdhC family protein compare
ABIE41_RS13710 -0.7 -2.2 xanthine dehydrogenase family protein subunit M compare
ABIE41_RS02355 -0.7 -0.9 Lrp/AsnC family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Bosea sp. OAE506 in stress experiments

For stress 3-octanone across organisms