Experiment set6S363 for Variovorax sp. OAS795

Compare to:

no phage control

200 most important genes:

  gene name fitness t score description  
ABID97_RS02060 -4.3 -11.0 TonB-dependent siderophore receptor compare
ABID97_RS05260 -3.3 -1.5 aminodeoxychorismate/anthranilate synthase component II compare
ABID97_RS20425 -3.3 -3.2 DUF2818 family protein compare
ABID97_RS08425 -2.8 -3.9 tryptophan synthase subunit alpha compare
ABID97_RS13325 -2.7 -1.2 antibiotic biosynthesis monooxygenase compare
ABID97_RS08570 -2.6 -7.9 ferrous iron transporter B compare
ABID97_RS23325 -2.6 -6.3 cytochrome c biogenesis protein ResB compare
ABID97_RS23665 -2.6 -1.7 DNA-directed RNA polymerase subunit omega compare
ABID97_RS25085 -2.5 -1.7 2-hydroxychromene-2-carboxylate isomerase compare
ABID97_RS23320 -2.3 -7.6 c-type cytochrome biogenesis protein CcsB compare
ABID97_RS12575 -2.2 -1.4 ATP-grasp domain-containing protein compare
ABID97_RS16435 -2.1 -3.8 SsrA-binding protein SmpB compare
ABID97_RS23030 -2.0 -6.4 polysaccharide biosynthesis tyrosine autokinase compare
ABID97_RS20130 -2.0 -5.1 outer membrane protein assembly factor BamC compare
ABID97_RS22625 -1.9 -5.0 HAMP domain-containing sensor histidine kinase compare
ABID97_RS23040 -1.9 -5.5 polysaccharide biosynthesis/export family protein compare
ABID97_RS23025 -1.9 -3.5 sugar transferase compare
ABID97_RS09175 -1.8 -1.1 hypothetical protein compare
ABID97_RS09130 -1.7 -1.3 tRNA-Ala compare
ABID97_RS07285 -1.7 -2.4 DUF502 domain-containing protein compare
ABID97_RS14100 -1.7 -5.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
ABID97_RS29030 -1.7 -1.6 3-isopropylmalate dehydratase small subunit compare
ABID97_RS06345 -1.6 -2.9 3-deoxy-7-phosphoheptulonate synthase compare
ABID97_RS16780 -1.6 -1.9 polysaccharide deacetylase family protein compare
ABID97_RS14665 -1.5 -1.4 UvrD-helicase domain-containing protein compare
ABID97_RS04760 -1.4 -1.5 SPOR domain-containing protein compare
ABID97_RS20095 -1.4 -1.6 DNA topoisomerase IV subunit B compare
ABID97_RS25340 -1.4 -5.6 apolipoprotein N-acyltransferase compare
ABID97_RS27795 -1.4 -1.0 TetR/AcrR family transcriptional regulator compare
ABID97_RS13600 -1.4 -1.2 hypothetical protein compare
ABID97_RS14260 -1.4 -3.1 FtsH protease activity modulator HflK compare
ABID97_RS18625 -1.4 -0.8 alpha/beta hydrolase compare
ABID97_RS14095 -1.4 -7.1 PAS domain S-box protein compare
ABID97_RS23645 -1.3 -1.0 PP2C family serine/threonine-protein phosphatase compare
ABID97_RS05275 -1.3 -0.9 anthranilate phosphoribosyltransferase compare
ABID97_RS22620 -1.3 -3.0 response regulator transcription factor compare
ABID97_RS13990 -1.3 -3.3 amino acid aminotransferase compare
ABID97_RS14265 -1.3 -3.7 protease modulator HflC compare
ABID97_RS06160 -1.3 -3.9 GTP-binding protein compare
ABID97_RS08530 -1.3 -2.5 hypothetical protein compare
ABID97_RS10920 -1.3 -1.4 molybdenum cofactor biosynthesis protein MoaE compare
ABID97_RS07500 -1.2 -0.8 iron-sulfur cluster carrier protein ApbC compare
ABID97_RS05250 -1.2 -4.1 anthranilate synthase component I compare
ABID97_RS10880 -1.2 -1.9 Mth938-like domain-containing protein compare
ABID97_RS17360 -1.2 -1.3 alpha/beta hydrolase compare
ABID97_RS07775 -1.2 -1.6 phosphoribosylglycinamide formyltransferase compare
ABID97_RS18865 -1.2 -1.8 ABC transporter ATP-binding protein compare
ABID97_RS18375 -1.2 -1.2 hypothetical protein compare
ABID97_RS14255 -1.2 -3.9 GTPase HflX compare
ABID97_RS19395 -1.2 -2.7 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABID97_RS25015 -1.2 -2.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABID97_RS22860 -1.1 -1.3 MurR/RpiR family transcriptional regulator compare
ABID97_RS05445 -1.1 -1.1 ORF6N domain-containing protein compare
ABID97_RS22305 -1.1 -2.1 AzlD domain-containing protein compare
ABID97_RS09275 -1.1 -3.3 polyprenyl synthetase family protein compare
ABID97_RS04480 -1.1 -0.7 magnesium/cobalt transporter CorA compare
ABID97_RS06520 -1.1 -0.7 SAM-dependent methyltransferase compare
ABID97_RS22940 -1.1 -2.0 single-stranded-DNA-specific exonuclease RecJ compare
ABID97_RS23225 -1.1 -8.4 glutamate synthase-related protein compare
ABID97_RS17030 -1.1 -1.5 GNAT family N-acetyltransferase compare
ABID97_RS23220 -1.0 -1.6 glutamate synthase subunit beta compare
ABID97_RS13390 -1.0 -1.5 NAD-dependent succinate-semialdehyde dehydrogenase compare
ABID97_RS16470 -1.0 -0.9 translational GTPase TypA compare
ABID97_RS08775 -1.0 -0.9 ribosome small subunit-dependent GTPase A compare
ABID97_RS28945 -1.0 -1.1 tripartite tricarboxylate transporter TctB family protein compare
ABID97_RS17635 -1.0 -1.9 presqualene diphosphate synthase HpnD compare
ABID97_RS23000 -1.0 -7.9 YjbH domain-containing protein compare
ABID97_RS27085 -1.0 -1.0 DNA alkylation repair protein compare
ABID97_RS10675 -1.0 -2.5 SurA N-terminal domain-containing protein compare
ABID97_RS27365 -1.0 -0.6 nitrogen assimilation transcriptional regulator NAC compare
ABID97_RS02530 -1.0 -3.7 peptidylprolyl isomerase compare
ABID97_RS12280 -1.0 -1.7 c-type cytochrome compare
ABID97_RS22975 -1.0 -4.2 cytochrome c1 compare
ABID97_RS06390 -1.0 -1.1 carbohydrate kinase family protein compare
ABID97_RS25405 -1.0 -4.3 16S ribosomal RNA compare
ABID97_RS02600 -1.0 -3.8 homoserine O-acetyltransferase compare
ABID97_RS05365 -1.0 -1.4 DUF4390 domain-containing protein compare
ABID97_RS26930 -1.0 -2.2 SLAC1 anion channel family protein compare
ABID97_RS10085 -1.0 -1.7 M20 family metallopeptidase compare
ABID97_RS19495 -1.0 -1.6 glucan biosynthesis protein D compare
ABID97_RS25390 -1.0 -4.7 23S ribosomal RNA compare
ABID97_RS19065 -0.9 -3.3 GntR family transcriptional regulator compare
ABID97_RS04005 -0.9 -2.0 ATP-binding cassette domain-containing protein compare
ABID97_RS05110 -0.9 -1.7 DUF4150 domain-containing protein compare
ABID97_RS05610 -0.9 -1.5 LysE family translocator compare
ABID97_RS13435 -0.9 -1.3 fumarylacetoacetate hydrolase family protein compare
ABID97_RS24745 -0.9 -1.1 glutathione S-transferase compare
ABID97_RS09405 -0.9 -1.0 xanthine dehydrogenase family protein subunit M compare
ABID97_RS23390 -0.9 -5.1 RNA pyrophosphohydrolase compare
ABID97_RS09180 -0.9 -2.6 DNA polymerase I compare
ABID97_RS14105 -0.9 -0.8 dihydrolipoyllysine-residue acetyltransferase compare
ABID97_RS23915 -0.9 -1.9 heme o synthase compare
ABID97_RS25910 -0.9 -2.3 FAD-binding oxidoreductase compare
ABID97_RS08340 -0.9 -4.6 MucB/RseB C-terminal domain-containing protein compare
ABID97_RS24045 -0.9 -2.7 type II toxin-antitoxin system prevent-host-death family antitoxin compare
ABID97_RS15190 -0.9 -1.2 phage baseplate assembly protein V compare
ABID97_RS06140 -0.9 -1.6 DUF484 family protein compare
ABID97_RS01975 -0.9 -5.2 MltA domain-containing protein compare
ABID97_RS01575 -0.9 -3.9 ATP-dependent DNA helicase RecG compare
ABID97_RS03420 -0.9 -2.1 histidine ammonia-lyase compare
ABID97_RS18690 -0.9 -1.3 hypothetical protein compare
ABID97_RS24190 -0.9 -1.8 3-oxoadipyl-CoA thiolase compare
ABID97_RS17685 -0.9 -1.8 ABC transporter ATP-binding protein compare
ABID97_RS05370 -0.9 -1.7 ATP-binding protein compare
ABID97_RS23015 -0.9 -1.3 glycosyltransferase family 4 protein compare
ABID97_RS22360 -0.9 -1.7 nucleoside deaminase compare
ABID97_RS08365 -0.8 -2.2 ribonuclease III compare
ABID97_RS22990 -0.8 -1.0 hypothetical protein compare
ABID97_RS08710 -0.8 -3.3 polynucleotide adenylyltransferase PcnB compare
ABID97_RS11880 -0.8 -1.8 NAD-dependent epimerase/dehydratase family protein compare
ABID97_RS04030 -0.8 -2.0 FAD-binding oxidoreductase compare
ABID97_RS20265 -0.8 -1.5 site-specific tyrosine recombinase XerD compare
ABID97_RS27675 -0.8 -2.7 pyruvate kinase compare
ABID97_RS15390 -0.8 -1.5 P1 family peptidase compare
ABID97_RS29350 -0.8 -1.2 nuclear transport factor 2 family protein compare
ABID97_RS08440 -0.8 -3.4 tRNA pseudouridine(38-40) synthase TruA compare
ABID97_RS16085 -0.8 -1.0 L,D-transpeptidase compare
ABID97_RS08860 -0.8 -2.2 SDR family NAD(P)-dependent oxidoreductase compare
ABID97_RS16920 -0.8 -4.3 NADP-dependent isocitrate dehydrogenase compare
ABID97_RS18205 -0.8 -2.9 XRE family transcriptional regulator compare
ABID97_RS26470 -0.8 -0.9 c-type cytochrome compare
ABID97_RS07855 -0.8 -2.1 ABC transporter ATP-binding protein compare
ABID97_RS16340 -0.8 -2.6 ankyrin repeat domain-containing protein compare
ABID97_RS23790 -0.8 -2.6 ATP-binding cassette domain-containing protein compare
ABID97_RS25755 -0.8 -2.1 glyoxylate/hydroxypyruvate reductase A compare
ABID97_RS10520 -0.8 -2.7 quaternary ammonium compound efflux SMR transporter SugE compare
ABID97_RS03110 -0.8 -3.7 helix-turn-helix transcriptional regulator compare
ABID97_RS18280 -0.8 -1.9 hypothetical protein compare
ABID97_RS12335 -0.8 -1.0 SDR family NAD(P)-dependent oxidoreductase compare
ABID97_RS02545 -0.7 -3.2 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABID97_RS12830 -0.7 -1.9 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS29385 -0.7 -1.0 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS20515 -0.7 -1.0 NAD(P)H-quinone oxidoreductase compare
ABID97_RS12510 -0.7 -1.9 response regulator transcription factor compare
ABID97_RS09635 -0.7 -0.6 DEAD/DEAH box helicase family protein compare
ABID97_RS11425 -0.7 -1.2 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS19550 -0.7 -0.7 phosphatase PAP2 family protein compare
ABID97_RS24055 -0.7 -1.0 TetR/AcrR family transcriptional regulator compare
ABID97_RS24730 -0.7 -1.2 Fis family transcriptional regulator compare
ABID97_RS06945 -0.7 -1.8 ATPase, T2SS/T4P/T4SS family compare
ABID97_RS15620 -0.7 -3.1 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABID97_RS08670 -0.7 -1.3 YciI family protein compare
ABID97_RS27720 -0.7 -0.9 fumarate reductase/succinate dehydrogenase flavoprotein subunit compare
ABID97_RS13010 -0.7 -0.9 DotU family type IV/VI secretion system protein compare
ABID97_RS26465 -0.7 -1.0 cytochrome c oxidase subunit II compare
ABID97_RS02455 -0.7 -2.3 nucleotidyltransferase family protein compare
ABID97_RS19375 -0.7 -2.1 bifunctional 2-methylcitrate dehydratase/aconitate hydratase compare
ABID97_RS24750 -0.7 -2.9 redox-regulated ATPase YchF compare
ABID97_RS19025 -0.7 -0.5 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS16450 -0.7 -3.7 anti-sigma factor compare
ABID97_RS11960 -0.7 -0.6 hypothetical protein compare
ABID97_RS01725 -0.7 -0.9 META domain-containing protein compare
ABID97_RS24920 -0.7 -0.7 Holliday junction branch migration protein RuvA compare
ABID97_RS01855 -0.7 -0.5 preprotein translocase subunit YajC compare
ABID97_RS23050 -0.7 -1.6 large conductance mechanosensitive channel protein MscL compare
ABID97_RS05700 -0.7 -3.8 GDP-mannose 4,6-dehydratase compare
ABID97_RS16985 -0.7 -1.0 transcriptional repressor LexA compare
ABID97_RS07000 -0.7 -3.4 threonine ammonia-lyase, biosynthetic compare
ABID97_RS15285 -0.7 -0.6 hypothetical protein compare
ABID97_RS08765 -0.7 -1.9 CobD/CbiB family protein compare
ABID97_RS27515 -0.7 -1.6 aconitase family protein compare
ABID97_RS13940 -0.7 -2.1 methylmalonyl Co-A mutase-associated GTPase MeaB compare
ABID97_RS05995 -0.7 -1.2 acyl-CoA dehydrogenase family protein compare
ABID97_RS11640 -0.7 -4.0 TetR family transcriptional regulator compare
ABID97_RS27835 -0.7 -2.0 acetyl-CoA C-acyltransferase compare
ABID97_RS01310 -0.7 -2.5 VOC family protein compare
ABID97_RS28675 -0.7 -0.8 hypothetical protein compare
ABID97_RS05480 -0.7 -4.3 EAL domain-containing protein compare
ABID97_RS13245 -0.7 -0.6 XRE family transcriptional regulator compare
ABID97_RS11380 -0.7 -2.0 acetyl-CoA C-acyltransferase compare
ABID97_RS13710 -0.7 -1.0 pyocin activator PrtN family protein compare
ABID97_RS08685 -0.7 -2.5 DJ-1/PfpI family protein compare
ABID97_RS08855 -0.7 -2.7 thiolase family protein compare
ABID97_RS12460 -0.7 -0.6 acetoacetyl-CoA reductase compare
ABID97_RS10305 -0.6 -0.9 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS07840 -0.6 -3.3 branched-chain amino acid ABC transporter permease compare
ABID97_RS06395 -0.6 -3.7 histone H1-like DNA-binding protein compare
ABID97_RS08755 -0.6 -1.2 50S ribosomal protein L19 compare
ABID97_RS22995 -0.6 -4.6 YjbF family lipoprotein compare
ABID97_RS02510 -0.6 -5.5 NADP-dependent malic enzyme compare
ABID97_RS04610 -0.6 -3.7 potassium transporter Kup compare
ABID97_RS13775 -0.6 -1.1 hypothetical protein compare
ABID97_RS27650 -0.6 -2.9 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS02525 -0.6 -3.6 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABID97_RS01380 -0.6 -1.5 LysR substrate-binding domain-containing protein compare
ABID97_RS03655 -0.6 -1.9 glycolate oxidase subunit GlcE compare
ABID97_RS15325 -0.6 -1.0 FAD-dependent oxidoreductase compare
ABID97_RS18950 -0.6 -1.8 ABC transporter ATP-binding protein compare
ABID97_RS23055 -0.6 -4.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABID97_RS23290 -0.6 -3.2 penicillin-binding protein 1A compare
ABID97_RS25745 -0.6 -1.0 dipeptide ABC transporter ATP-binding protein compare
ABID97_RS19695 -0.6 -0.5 alpha/beta fold hydrolase compare
ABID97_RS12070 -0.6 -2.6 EAL domain-containing protein compare
ABID97_RS17450 -0.6 -2.0 helix-turn-helix domain-containing protein compare
ABID97_RS12405 -0.6 -0.8 peptidoglycan editing factor PgeF compare
ABID97_RS06060 -0.6 -0.6 hypothetical protein compare
ABID97_RS02230 -0.6 -4.3 Stp1/IreP family PP2C-type Ser/Thr phosphatase compare
ABID97_RS12885 -0.6 -1.2 transketolase compare
ABID97_RS07615 -0.6 -1.4 ATP-binding protein compare
ABID97_RS16685 -0.6 -2.0 tol-pal system protein YbgF compare


Specific Phenotypes

None in this experiment

For Variovorax sp. OAS795 in no phage control experiments