Experiment set6S32 for Escherichia coli ECOR27

Compare to:

CPL00144L

200 most important genes:

  gene name fitness t score description  
NOLOHH_15730 -4.9 -8.2 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07545 waaO -4.6 -3.1 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_06715 wecA -4.4 -19.5 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -3.9 -7.4 O-antigen ligase RfaL compare
NOLOHH_06675 wzxE -3.8 -5.8 lipid III flippase WzxE compare
NOLOHH_12545 recA -3.8 -4.2 recombinase RecA compare
NOLOHH_24815 trbG -3.8 -1.7 conjugal transfer protein TrbG compare
NOLOHH_06665 wzyE -3.5 -7.3 ECA oligosaccharide polymerase compare
NOLOHH_16845 zwf -3.2 -2.0 glucose-6-phosphate dehydrogenase compare
NOLOHH_23485 seqA -3.2 -3.7 replication initiation negative regulator SeqA compare
NOLOHH_23145 galE -3.1 -4.2 UDP-glucose 4-epimerase GalE compare
NOLOHH_07575 rfaF -3.0 -2.9 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_20460 galU -3.0 -2.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_05815 metL -3.0 -11.7 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_23310 odhB -2.9 -2.0 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_07535 rfaG -2.9 -5.1 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_11230 tkt -2.8 -2.7 transketolase compare
NOLOHH_24675 finO -2.8 -8.1 Fertility inhibition protein compare
NOLOHH_07560 rfaB -2.7 -5.5 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_06530 corA -2.7 -3.6 magnesium/cobalt transporter CorA compare
NOLOHH_14595 arnT -2.6 -2.5 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
NOLOHH_17810 pykF -2.5 -3.3 pyruvate kinase PykF compare
NOLOHH_18885 ydeP -2.5 -2.9 acid resistance putative oxidoreductase YdeP compare
NOLOHH_18955 ddpX -2.5 -3.0 D-alanyl-D-alanine dipeptidase compare
NOLOHH_11365 rpiA -2.5 -1.7 ribose-5-phosphate isomerase RpiA compare
NOLOHH_05830 metJ -2.4 -2.7 met regulon transcriptional regulator MetJ compare
NOLOHH_13055 rseA -2.4 -2.7 anti-sigma-E factor RseA compare
NOLOHH_02285 hcp1,tssD1 -2.3 -1.7 type VI secretion system protein, Hcp family compare
NOLOHH_23480 pgm -2.2 -3.3 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_24530 -2.2 -2.6 HTH-21 domain-containing protein compare
NOLOHH_07125 -2.2 -3.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_20440 ychT -2.1 -1.9 Protein YchT compare
NOLOHH_14475 nuoE -2.1 -2.5 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_02845 aceE -2.1 -1.4 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_11495 xerD -2.1 -2.2 site-specific tyrosine recombinase XerD compare
NOLOHH_06550 xerC -2.1 -2.5 tyrosine recombinase XerC compare
NOLOHH_06755 ppiC -2.0 -1.8 peptidylprolyl isomerase PpiC compare
NOLOHH_02825 acnB -2.0 -2.6 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_07555 rfaJ -2.0 -1.7 glucosyltransferase compare
NOLOHH_11705 -2.0 -3.6 PrgH/EprH family type III secretion apparatus protein compare
NOLOHH_13300 iscA -1.9 -1.9 iron-sulfur cluster assembly protein IscA compare
NOLOHH_19570 sitB -1.9 -1.8 iron/manganese ABC transporter ATP-binding protein SitB compare
NOLOHH_23045 -1.9 -4.5 hypothetical protein compare
NOLOHH_18855 fimA -1.9 -1.2 type 1 fimbrial major subunit FimA compare
NOLOHH_18080 ydgK -1.9 -1.4 Inner membrane protein YdgK compare
NOLOHH_23245 tolA -1.8 -4.6 cell envelope integrity protein TolA compare
NOLOHH_09835 obgE -1.8 -1.6 GTPase ObgE compare
NOLOHH_22905 ninH -1.8 -4.7 Protein ninH compare
NOLOHH_14340 ubiX -1.8 -2.6 flavin prenyltransferase UbiX compare
NOLOHH_20905 hflD -1.8 -2.0 high frequency lysogenization protein HflD compare
NOLOHH_04165 treC -1.8 -4.6 alpha,alpha-phosphotrehalase compare
NOLOHH_06395 rfaH -1.7 -5.2 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_23510 fur -1.6 -2.1 ferric iron uptake transcriptional regulator compare
NOLOHH_20465 rssB -1.6 -3.0 two-component system response regulator RssB compare
NOLOHH_19475 paaD -1.6 -2.4 phenylacetate degradation protein PaaD compare
NOLOHH_13415 guaA -1.6 -2.0 glutamine-hydrolyzing GMP synthase compare
NOLOHH_09695 arcB -1.6 -4.2 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_16595 cheY -1.5 -2.1 chemotaxis regulatory protein CheY compare
NOLOHH_06540 uvrD -1.5 -9.6 DNA helicase II compare
NOLOHH_09875 secG -1.5 -1.8 preprotein translocase subunit SecG compare
NOLOHH_11425 ubiI -1.5 -2.2 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_16080 -1.5 -1.3 hypothetical protein compare
NOLOHH_04525 miaA -1.5 -1.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_03190 apaH -1.5 -5.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_10555 glgS -1.5 -1.5 cell surface composition regulator GlgS compare
NOLOHH_05225 dgkA -1.5 -3.1 diacylglycerol kinase compare
NOLOHH_23030 -1.5 -2.3 siphovirus Gp157 family protein compare
NOLOHH_00705 gam -1.5 -2.3 Host-nuclease inhibitor protein gam compare
NOLOHH_17075 nudL -1.5 -2.1 CoA pyrophosphatase compare
NOLOHH_24755 -1.5 -0.9 toxin ArtA compare
NOLOHH_00565 -1.4 -1.8 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_04005 Leu_trna -1.4 -1.3 tRNA-Leu(caa) compare
NOLOHH_14515 nuoM -1.4 -4.4 NADH-quinone oxidoreductase subunit M compare
NOLOHH_00445 -1.4 -2.7 peptidyl-arginine deiminase compare
NOLOHH_22830 -1.4 -6.2 packaged DNA stabilization protein p27 compare
NOLOHH_22840 -1.4 -8.7 head protein compare
NOLOHH_13115 shoB -1.4 -1.2 Small toxic protein ShoB compare
NOLOHH_16440 uvrY -1.4 -2.2 UvrY/SirA/GacA family response regulator transcription factor compare
NOLOHH_17055 -1.4 -1.5 Cytoplasmic protein compare
NOLOHH_05490 hupA -1.4 -1.0 DNA-binding protein HU-alpha compare
NOLOHH_13035 srmB -1.4 -5.9 ATP-dependent RNA helicase SrmB compare
NOLOHH_13070 rseC -1.4 -3.1 SoxR-reducing system protein RseC compare
NOLOHH_06920 mnmG -1.4 -3.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_22835 -1.4 -4.1 hypothetical protein compare
NOLOHH_23035 -1.4 -2.9 DUF5405 domain-containing protein compare
NOLOHH_08775 -1.4 -4.2 NfuA family Fe-S biogenesis protein compare
NOLOHH_01270 clpP -1.3 -2.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_22050 serC -1.3 -6.0 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_19350 mokB -1.3 -1.2 IS3 family transposase compare
NOLOHH_22860 -1.3 -3.1 terminase small subunit compare
NOLOHH_15015 fruB -1.3 -4.4 fused PTS fructose transporter subunit IIA/HPr protein compare
NOLOHH_14490 nuoH -1.3 -3.8 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_05885 hslU -1.3 -2.4 HslU--HslV peptidase ATPase subunit compare
NOLOHH_13075 lepA -1.3 -3.1 translation elongation factor 4 compare
NOLOHH_23240 tolB -1.3 -4.4 Tol-Pal system protein TolB compare
NOLOHH_18305 ynfA -1.3 -1.0 YnfA family protein compare
NOLOHH_22845 -1.2 -3.7 phage capsid protein compare
NOLOHH_22935 ninB -1.2 -5.2 Protein ninB compare
NOLOHH_16505 ftnB -1.2 -1.1 non-heme ferritin-like protein compare
NOLOHH_09610 zapG -1.2 -4.3 Z-ring associated protein ZapG compare
NOLOHH_19785 -1.2 -2.1 DUF977 domain-containing protein compare
NOLOHH_03020 rsmH -1.2 -1.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
NOLOHH_18805 lsrB -1.2 -2.8 autoinducer 2 ABC transporter substrate-binding protein LsrB compare
NOLOHH_03170 surA -1.2 -3.5 peptidylprolyl isomerase SurA compare
NOLOHH_13865 crr -1.2 -1.0 PTS glucose transporter subunit IIA compare
NOLOHH_10650 ygiZ -1.2 -2.9 Inner membrane protein YgiZ compare
NOLOHH_09400 Thr_trna -1.2 -1.5 tRNA-Thr(ggt) compare
NOLOHH_20635 dauA -1.2 -2.4 C4-dicarboxylic acid transporter DauA compare
NOLOHH_12705 ygaP -1.2 -1.4 thiosulfate sulfurtransferase YgaP compare
NOLOHH_17620 btuC -1.2 -2.1 vitamin B12 ABC transporter permease BtuC compare
NOLOHH_11360 yqfE -1.2 -1.5 Putative protein YqfE compare
NOLOHH_02315 rnhA -1.1 -2.9 ribonuclease HI compare
NOLOHH_17675 ydiT -1.1 -1.1 Ferredoxin-like protein YdiT compare
NOLOHH_20865 bluF -1.1 -1.2 blue light-responsive regulator BluF compare
NOLOHH_23025 -1.1 -5.2 DNA recombinase compare
NOLOHH_07540 rfaP -1.1 -4.0 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_17565 yniD -1.1 -1.0 Uncharacterized protein YniD compare
NOLOHH_15925 pduU -1.1 -2.9 propanediol utilization microcompartment protein PduU compare
NOLOHH_22920 -1.1 -1.6 protein ninF compare
NOLOHH_23995 fes -1.1 -2.9 enterobactin/ferric enterobactin esterase compare
NOLOHH_21130 yceD -1.1 -1.9 23S rRNA accumulation protein YceD compare
NOLOHH_01255 lon_P403L -1.1 -5.7 Lon protease compare
NOLOHH_13185 glyA -1.1 -3.0 serine hydroxymethyltransferase compare
NOLOHH_17530 ybcI -1.1 -1.8 metal-dependent hydrolase compare
NOLOHH_00515 -1.1 -3.3 Phage minor tail protein G compare
NOLOHH_22825 -1.1 -5.8 Packaged DNA stabilization protein gp10 compare
NOLOHH_22820 -1.1 -4.3 Phage-tail-NK domain-containing protein compare
NOLOHH_06590 cyaA -1.1 -5.4 class I adenylate cyclase compare
NOLOHH_22940 -1.1 -3.7 NinA compare
NOLOHH_23350 fimA -1.1 -1.1 type 1 fimbrial protein compare
NOLOHH_22850 -1.1 -6.1 portal protein compare
NOLOHH_18245 mlc -1.1 -1.2 DNA-binding transcriptional repressor Mlc compare
NOLOHH_04065 holC -1.1 -3.8 DNA polymerase III subunit chi compare
NOLOHH_22815 -1.0 -5.7 DUF2824 domain-containing protein compare
NOLOHH_22880 -1.0 -5.7 phage holin, lambda family compare
NOLOHH_06520 -1.0 -0.8 DUF3289 domain-containing protein compare
NOLOHH_22855 -1.0 -4.4 PBSX family phage terminase large subunit compare
NOLOHH_16425 yecC -1.0 -0.9 L-cystine ABC transporter ATP-binding protein YecC compare
NOLOHH_05965 pfkA -1.0 -3.7 6-phosphofructokinase compare
NOLOHH_20185 rnb -1.0 -1.6 exoribonuclease II compare
NOLOHH_22930 -1.0 -4.0 phage N-6-adenine-methyltransferase compare
NOLOHH_00520 -1.0 -2.8 Tail tube protein compare
NOLOHH_16025 pocR -1.0 -1.4 regulatory protein PocR compare
NOLOHH_10285 yqiM -1.0 -2.3 Protein YqiM compare
NOLOHH_14495 nuoI -1.0 -1.6 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_11770 yqeL -1.0 -1.3 Uncharacterized protein YqeL compare
NOLOHH_02290 yafU -1.0 -1.9 Putative inner membrane protein YafU compare
NOLOHH_17010 yobH -1.0 -1.8 Uncharacterized protein YobH compare
NOLOHH_11110 rdgB -1.0 -3.1 XTP/dITP diphosphatase compare
NOLOHH_08905 aroB -1.0 -3.8 3-dehydroquinate synthase compare
NOLOHH_22800 -1.0 -5.5 DNA transfer protein compare
NOLOHH_11785 -1.0 -1.1 hypothetical protein compare
NOLOHH_22810 -1.0 -5.9 DNA transfer protein compare
NOLOHH_21840 ycbX -0.9 -2.4 6-N-hydroxylaminopurine resistance protein YcbX compare
NOLOHH_18115 hdhA -0.9 -1.3 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_14485 nuoG -0.9 -3.7 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_08145 bcsZ -0.9 -4.8 cellulose synthase complex periplasmic endoglucanase BcsZ compare
NOLOHH_11670 escR -0.9 -0.8 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
NOLOHH_23040 -0.9 -3.2 hypothetical protein compare
NOLOHH_06110 -0.9 -1.3 hypothetical protein compare
NOLOHH_10120 agaR -0.9 -3.8 aga operon transcriptional regulator AgaR compare
NOLOHH_23235 pal -0.9 -2.4 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_05695 sthA -0.9 -3.9 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_18930 gadC -0.9 -1.8 acid resistance gamma-aminobutyrate antiporter GadC compare
NOLOHH_16160 mtfA -0.9 -1.2 DgsA anti-repressor MtfA compare
NOLOHH_01595 iprA -0.9 -2.0 hydrogen peroxide resistance inhibitor IprA compare
NOLOHH_14470 nuoC -0.9 -2.9 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_22805 -0.9 -6.3 DNA transfer protein compare
NOLOHH_17480 chbC -0.9 -1.3 PTS N,N'-diacetylchitobiose transporter subunit IIC compare
NOLOHH_00360 -0.9 -5.2 relaxase/mobilization nuclease compare
NOLOHH_21365 csgB -0.9 -1.7 curlin minor subunit CsgB compare
NOLOHH_09730 ptsN -0.9 -1.7 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_22600 ybiI -0.9 -1.1 C4-type zinc finger protein YbiI compare
NOLOHH_11740 pbl -0.9 -1.8 Putative peptidoglycan-binding-like protein compare
NOLOHH_11480 sdhE -0.9 -0.6 FAD assembly factor SdhE compare
NOLOHH_18130 uidB -0.9 -1.5 glucuronide transporter compare
NOLOHH_00915 allA -0.9 -1.6 ureidoglycolate lyase compare
NOLOHH_12610 luxS -0.9 -3.1 S-ribosylhomocysteine lyase compare
NOLOHH_24255 yubO -0.9 -1.4 Uncharacterized protein YubO compare
NOLOHH_02510 skp -0.8 -1.1 molecular chaperone Skp compare
NOLOHH_02185 ydcD -0.8 -0.8 Uncharacterized protein YdcD compare
NOLOHH_18110 malI -0.8 -1.4 mal regulon transcriptional regulator MalI compare
NOLOHH_11000 gspI -0.8 -1.2 general secretion pathway protein I compare
NOLOHH_11515 lysS -0.8 -1.5 lysine--tRNA ligase compare
NOLOHH_22790 -0.8 -3.9 phage head-binding domain-containing protein compare
NOLOHH_19330 ydcJ -0.8 -1.3 Uncharacterized protein YdcJ compare
NOLOHH_23975 fepC -0.8 -2.5 ferrienterobactin ABC transporter ATPase compare
NOLOHH_18315 rspB -0.8 -1.3 Zn-dependent oxidoreductase compare
NOLOHH_08375 pitA -0.8 -3.0 inorganic phosphate transporter PitA compare
NOLOHH_21085 yceG -0.8 -2.7 cell division protein YceG compare
NOLOHH_17835 -0.8 -1.0 Ferredoxin compare
NOLOHH_00490 -0.8 -3.2 Tail tip assembly protein K compare
NOLOHH_10580 ubiK -0.8 -1.7 ubiquinone biosynthesis accessory factor UbiK compare
NOLOHH_21675 cbdX -0.8 -1.1 cytochrome bd-II oxidase subunit CbdX compare
NOLOHH_14455 -0.8 -0.9 hypothetical protein compare
NOLOHH_22570 glnQ -0.8 -1.0 glutamine ABC transporter ATP-binding protein GlnQ compare
NOLOHH_24535 -0.8 -1.8 Integrase catalytic domain-containing protein compare
NOLOHH_23105 pgl -0.8 -3.4 6-phosphogluconolactonase compare
NOLOHH_05495 yjaG -0.8 -2.6 Uncharacterized protein YjaG compare
NOLOHH_20950 potD -0.8 -2.4 spermidine/putrescine ABC transporter substrate-binding protein PotD compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms