Experiment set6S3 for Escherichia coli ECOR27

Compare to:

Bas91

200 most important genes:

  gene name fitness t score description  
NOLOHH_01630 yaiS -4.3 -2.8 Uncharacterized deacetylase YaiS compare
NOLOHH_17180 yoaJ -4.2 -1.7 protein YoaJ compare
NOLOHH_16080 -4.0 -1.6 hypothetical protein compare
NOLOHH_07710 yibG -3.7 -1.5 Uncharacterized protein YibG compare
NOLOHH_08605 yrhA -3.5 -1.4 protein YrhA compare
NOLOHH_23485 seqA -3.4 -3.3 replication initiation negative regulator SeqA compare
NOLOHH_14505 nuoK -3.4 -2.3 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_18115 hdhA -3.2 -2.0 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_21130 yceD -3.1 -2.2 23S rRNA accumulation protein YceD compare
NOLOHH_21380 cgsE -3.1 -1.2 curli production assembly/transport protein CsgE compare
NOLOHH_11650 Gly_trna -3.0 -1.1 tRNA-Gly(ccc) compare
NOLOHH_05815 metL -2.9 -10.6 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_14455 -2.8 -1.5 hypothetical protein compare
NOLOHH_19205 mddA -2.7 -1.5 L-methionine sulfoximine/L-methionine sulfone acetyltransferase compare
NOLOHH_00560 -2.7 -1.5 phage portal protein compare
NOLOHH_14340 ubiX -2.7 -1.8 flavin prenyltransferase UbiX compare
NOLOHH_17400 ydjZ -2.7 -2.6 TVP38/TMEM64 family inner membrane protein YdjZ compare
NOLOHH_20485 Tyr_trna -2.7 -1.5 tRNA-Tyr(gta) compare
NOLOHH_06665 wzyE -2.6 -6.2 ECA oligosaccharide polymerase compare
NOLOHH_14460 nuoA -2.5 -3.0 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_16355 yedK -2.5 -2.4 Abasic site processing protein YedK compare
NOLOHH_11425 ubiI -2.5 -1.7 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_23045 -2.4 -2.3 hypothetical protein compare
NOLOHH_19710 -2.4 -2.2 transcriptional regulator compare
NOLOHH_11495 xerD -2.4 -2.9 site-specific tyrosine recombinase XerD compare
NOLOHH_08775 -2.3 -4.8 NfuA family Fe-S biogenesis protein compare
NOLOHH_17810 pykF -2.3 -2.7 pyruvate kinase PykF compare
NOLOHH_20940 potB -2.2 -1.9 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_05830 metJ -2.2 -1.6 met regulon transcriptional regulator MetJ compare
NOLOHH_14015 fryB -2.1 -1.4 PTS system fructose-like EIIB component 1 compare
NOLOHH_18125 uidA -2.1 -2.8 beta-glucuronidase compare
NOLOHH_09835 obgE -2.0 -1.4 GTPase ObgE compare
NOLOHH_23315 sucA -2.0 -1.3 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_17055 -2.0 -1.6 Cytoplasmic protein compare
NOLOHH_23510 fur -2.0 -1.9 ferric iron uptake transcriptional regulator compare
NOLOHH_21095 fabF -2.0 -2.3 beta-ketoacyl-ACP synthase II compare
NOLOHH_18885 ydeP -2.0 -2.3 acid resistance putative oxidoreductase YdeP compare
NOLOHH_24675 finO -2.0 -8.6 Fertility inhibition protein compare
NOLOHH_14595 arnT -2.0 -1.4 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
NOLOHH_06550 xerC -2.0 -2.3 tyrosine recombinase XerC compare
NOLOHH_17785 sufD -1.9 -1.8 Fe-S cluster assembly protein SufD compare
NOLOHH_13415 guaA -1.9 -1.8 glutamine-hydrolyzing GMP synthase compare
NOLOHH_18985 -1.9 -2.4 LysR family transcriptional regulator compare
NOLOHH_20690 ymgE -1.9 -2.1 UPF0410 protein YmgE compare
NOLOHH_20905 hflD -1.9 -1.6 high frequency lysogenization protein HflD compare
NOLOHH_01270 clpP -1.9 -2.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_19970 ycjY -1.9 -3.1 Uncharacterized protein YcjY compare
NOLOHH_00565 -1.8 -1.6 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_14470 nuoC -1.8 -4.6 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_06530 corA -1.8 -3.0 magnesium/cobalt transporter CorA compare
NOLOHH_07575 rfaF -1.8 -2.4 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_24530 -1.8 -3.2 HTH-21 domain-containing protein compare
NOLOHH_19500 tynA -1.8 -2.1 primary-amine oxidase compare
NOLOHH_11365 rpiA -1.8 -1.2 ribose-5-phosphate isomerase RpiA compare
NOLOHH_18050 rsxE -1.8 -2.0 electron transport complex subunit RsxE compare
NOLOHH_16905 holE -1.8 -2.1 DNA polymerase III subunit theta compare
NOLOHH_20015 ycjW -1.8 -1.6 Uncharacterized HTH-type transcriptional regulator YcjW compare
NOLOHH_19520 -1.8 -1.4 YnbE family lipoprotein compare
NOLOHH_09695 arcB -1.8 -4.2 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_14780 apbE -1.8 -1.2 FAD:protein FMN transferase ApbE compare
NOLOHH_14475 nuoE -1.7 -1.8 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_15615 dcd -1.7 -3.2 dCTP deaminase compare
NOLOHH_14495 nuoI -1.7 -2.0 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_19015 -1.7 -1.9 3-hydroxybutyrate dehydrogenase compare
NOLOHH_07125 -1.7 -2.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_11120 yggT -1.7 -1.1 osmotic shock tolerance protein YggT compare
NOLOHH_21490 efeU -1.7 -1.5 Ferrous iron permease EfeU compare
NOLOHH_13075 lepA -1.7 -3.4 translation elongation factor 4 compare
NOLOHH_17405 ydjY -1.6 -1.8 Uncharacterized protein YdjY compare
NOLOHH_24460 -1.6 -2.1 LngX2 compare
NOLOHH_20170 -1.6 -1.6 DUF559 domain-containing protein compare
NOLOHH_21840 ycbX -1.6 -2.9 6-N-hydroxylaminopurine resistance protein YcbX compare
NOLOHH_18315 rspB -1.6 -1.8 Zn-dependent oxidoreductase compare
NOLOHH_02285 hcp1,tssD1 -1.6 -1.3 type VI secretion system protein, Hcp family compare
NOLOHH_22910 ninG -1.6 -3.9 Protein ninG compare
NOLOHH_13035 srmB -1.5 -5.7 ATP-dependent RNA helicase SrmB compare
NOLOHH_20700 emtA -1.5 -1.1 membrane-bound lytic murein transglycosylase EmtA compare
NOLOHH_17690 ydiQ -1.5 -1.1 electron transfer flavoprotein compare
NOLOHH_19080 narU -1.5 -2.0 nitrate/nitrite transporter NarU compare
NOLOHH_22360 ybjM -1.5 -1.3 Inner membrane protein YbjM compare
NOLOHH_22820 -1.5 -5.3 Phage-tail-NK domain-containing protein compare
NOLOHH_19490 paaA -1.5 -2.5 1,2-phenylacetyl-CoA epoxidase subunit A compare
NOLOHH_06540 uvrD -1.5 -8.5 DNA helicase II compare
NOLOHH_20785 ycgL -1.4 -1.2 Protein YcgL compare
NOLOHH_22855 -1.4 -4.4 PBSX family phage terminase large subunit compare
NOLOHH_00445 -1.4 -2.5 peptidyl-arginine deiminase compare
NOLOHH_13300 iscA -1.4 -1.2 iron-sulfur cluster assembly protein IscA compare
NOLOHH_20925 roxA -1.4 -3.0 [50S ribosomal protein L16]-arginine 3-hydroxylase compare
NOLOHH_02180 yncI -1.4 -1.2 ISAs1 family transposase compare
NOLOHH_13865 crr -1.4 -0.9 PTS glucose transporter subunit IIA compare
NOLOHH_02185 ydcD -1.4 -0.9 Uncharacterized protein YdcD compare
NOLOHH_19350 mokB -1.3 -1.1 IS3 family transposase compare
NOLOHH_11515 lysS -1.3 -1.8 lysine--tRNA ligase compare
NOLOHH_22825 -1.3 -4.9 Packaged DNA stabilization protein gp10 compare
NOLOHH_05225 dgkA -1.3 -2.6 diacylglycerol kinase compare
NOLOHH_02845 aceE -1.3 -1.2 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_04165 treC -1.3 -3.8 alpha,alpha-phosphotrehalase compare
NOLOHH_03075 leuD -1.3 -2.1 3-isopropylmalate dehydratase small subunit compare
NOLOHH_21165 flgJ -1.3 -2.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
NOLOHH_22075 pflA -1.3 -1.7 pyruvate formate lyase 1-activating protein compare
NOLOHH_24620 -1.3 -1.3 ISSfl4 ORF1 compare
NOLOHH_18240 ynfL -1.3 -1.2 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_19135 -1.3 -3.2 DUF6531 domain-containing protein compare
NOLOHH_19435 paaX -1.3 -0.9 phenylacetic acid degradation operon negative regulatory protein PaaX compare
NOLOHH_04525 miaA -1.3 -0.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_05005 ytcA -1.3 -1.5 Uncharacterized protein YtcA compare
NOLOHH_00615 quuD -1.3 -0.8 antitermination protein QuuD compare
NOLOHH_03880 uxuR -1.2 -4.4 Uxu operon transcriptional regulator compare
NOLOHH_14200 sixA -1.2 -1.5 phosphohistidine phosphatase SixA compare
NOLOHH_10650 ygiZ -1.2 -1.4 Inner membrane protein YgiZ compare
NOLOHH_18025 pdxY -1.2 -1.3 pyridoxal kinase PdxY compare
NOLOHH_16195 hprR -1.2 -1.7 response regulator transcription factor HprR compare
NOLOHH_20120 puuR -1.2 -2.7 HTH-type transcriptional regulator PuuR compare
NOLOHH_21230 yceM -1.2 -3.0 Putative oxidoreductase YceM compare
NOLOHH_07540 rfaP -1.2 -3.7 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_02175 yncI -1.2 -1.4 ISAs1 family transposase compare
NOLOHH_02510 skp -1.2 -1.2 molecular chaperone Skp compare
NOLOHH_15585 pphC -1.2 -2.3 Serine/threonine-protein phosphatase 3 compare
NOLOHH_23040 -1.2 -3.8 hypothetical protein compare
NOLOHH_22050 serC -1.2 -5.4 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_11465 yqfA -1.2 -2.0 hemolysin III family protein compare
NOLOHH_00360 -1.2 -7.5 relaxase/mobilization nuclease compare
NOLOHH_22880 -1.2 -4.4 phage holin, lambda family compare
NOLOHH_21120 plsX -1.2 -2.7 phosphate acyltransferase PlsX compare
NOLOHH_19455 paaC -1.2 -0.9 3-hydroxyacyl-CoA dehydrogenase PaaC compare
NOLOHH_09845 greA -1.2 -1.0 transcription elongation factor GreA compare
NOLOHH_16395 -1.2 -2.7 flagellin FliC compare
NOLOHH_20635 dauA -1.2 -2.3 C4-dicarboxylic acid transporter DauA compare
NOLOHH_14480 nuoF -1.2 -4.3 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_05965 pfkA -1.2 -3.1 6-phosphofructokinase compare
NOLOHH_00740 dksA -1.2 -2.0 conjugal transfer protein TraR compare
NOLOHH_22840 -1.2 -6.0 head protein compare
NOLOHH_08495 yhhL -1.2 -1.1 DUF1145 domain-containing protein compare
NOLOHH_22845 -1.2 -3.2 phage capsid protein compare
NOLOHH_20050 ycjQ -1.1 -2.0 D-guloside 3-dehydrogenase compare
NOLOHH_00900 hyi -1.1 -2.4 hydroxypyruvate isomerase compare
NOLOHH_06675 wzxE -1.1 -3.1 lipid III flippase WzxE compare
NOLOHH_15140 cdd -1.1 -1.5 cytidine deaminase compare
NOLOHH_14465 nuoB -1.1 -3.7 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_22850 -1.1 -5.4 portal protein compare
NOLOHH_18070 rsxB -1.1 -1.2 electron transport complex subunit RsxB compare
NOLOHH_22935 ninB -1.1 -3.5 Protein ninB compare
NOLOHH_00385 -1.1 -3.0 hypothetical protein compare
NOLOHH_23425 ybfC -1.1 -1.1 Uncharacterized protein YbfC compare
NOLOHH_17980 ydhK -1.1 -1.6 Uncharacterized transporter YdhK compare
NOLOHH_16275 dsrB -1.1 -1.3 protein DsrB compare
NOLOHH_23260 ybgC -1.1 -2.3 tol-pal system-associated acyl-CoA thioesterase compare
NOLOHH_20255 yciX -1.1 -1.2 YmiA family putative membrane protein compare
NOLOHH_15345 rcnA -1.1 -2.6 nickel/cobalt efflux protein RcnA compare
NOLOHH_13585 -1.1 -1.4 hypothetical protein compare
NOLOHH_20970 nagK -1.1 -1.2 N-acetylglucosamine kinase compare
NOLOHH_01100 apt -1.1 -2.5 adenine phosphoribosyltransferase compare
NOLOHH_18185 ydgI -1.1 -1.7 Putative arginine/ornithine antiporter compare
NOLOHH_19340 trg -1.1 -2.2 methyl-accepting chemotaxis protein Trg compare
NOLOHH_22810 -1.1 -5.4 DNA transfer protein compare
NOLOHH_17315 pncA -1.1 -2.1 bifunctional nicotinamidase/pyrazinamidase compare
NOLOHH_24115 -1.1 -0.7 hypothetical protein compare
NOLOHH_06920 mnmG -1.1 -2.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_16595 cheY -1.1 -1.1 chemotaxis regulatory protein CheY compare
NOLOHH_22835 -1.1 -2.4 hypothetical protein compare
NOLOHH_22915 -1.0 -2.5 hypothetical protein compare
NOLOHH_22920 -1.0 -1.8 protein ninF compare
NOLOHH_01110 priC -1.0 -2.8 primosomal replication protein N'' compare
NOLOHH_06115 -1.0 -1.4 transcriptional regulator compare
NOLOHH_17125 rnd -1.0 -1.1 ribonuclease D compare
NOLOHH_21315 yceK -1.0 -1.3 YceK/YidQ family lipoprotein compare
NOLOHH_11360 yqfE -1.0 -1.1 Putative protein YqfE compare
NOLOHH_21950 gloC -1.0 -1.5 hydroxyacylglutathione hydrolase GloC compare
NOLOHH_03870 idlP -1.0 -1.5 iraD leader peptide compare
NOLOHH_14515 nuoM -1.0 -3.2 NADH-quinone oxidoreductase subunit M compare
NOLOHH_20660 dhaR -1.0 -2.9 dihydroxyacetone kinase operon transcriptional regulator DhaR compare
NOLOHH_22830 -1.0 -5.3 packaged DNA stabilization protein p27 compare
NOLOHH_03190 apaH -1.0 -3.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_17115 fadD -1.0 -1.1 long-chain-fatty-acid--CoA ligase FadD compare
NOLOHH_19865 intR -1.0 -2.2 Prophage integrase IntR compare
NOLOHH_23250 tolR -1.0 -1.8 colicin uptake protein TolR compare
NOLOHH_15960 pduM -1.0 -1.2 microcompartment protein PduM compare
NOLOHH_06590 cyaA -1.0 -5.3 class I adenylate cyclase compare
NOLOHH_15000 yeiW -1.0 -0.8 UPF0153 protein YeiW compare
NOLOHH_22815 -1.0 -3.8 DUF2824 domain-containing protein compare
NOLOHH_03360 nhaA -1.0 -1.8 Na+/H+ antiporter NhaA compare
NOLOHH_14490 nuoH -1.0 -2.4 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_15130 yeiS -1.0 -1.7 Uncharacterized protein YeiS compare
NOLOHH_03030 cra -1.0 -3.6 catabolite repressor/activator compare
NOLOHH_09530 rng -1.0 -2.5 ribonuclease G conserved
NOLOHH_18960 ddpA -1.0 -1.4 putative D,D-dipeptide-binding periplasmic protein DdpA compare
NOLOHH_14690 yfaE -1.0 -1.3 ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE compare
NOLOHH_20665 dhaK -1.0 -1.3 dihydroxyacetone kinase subunit DhaK compare
NOLOHH_04490 nsrR -1.0 -3.5 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_24185 tfa -1.0 -1.2 Tail fiber assembly protein compare
NOLOHH_01255 lon_P403L -1.0 -4.1 Lon protease compare
NOLOHH_03605 yjjG -1.0 -2.3 pyrimidine 5'-nucleotidase compare
NOLOHH_14095 yfdV -1.0 -1.5 transporter YfdV compare
NOLOHH_14510 nuoL -0.9 -3.2 NADH-quinone oxidoreductase subunit L compare
NOLOHH_14485 nuoG -0.9 -3.3 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_18555 -0.9 -1.7 Tail component of prophage CP-933X compare
NOLOHH_22870 -0.9 -2.1 lysis protein compare
NOLOHH_13720 eutN -0.9 -0.6 ethanolamine utilization microcompartment protein EutN compare
NOLOHH_20520 narK -0.9 -1.4 nitrate transporter NarK compare
NOLOHH_22790 -0.9 -2.8 phage head-binding domain-containing protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms