Experiment set6S167 for Escherichia coli BL21

Compare to:

Laval1374

200 most detrimental genes:

  gene name fitness t score description  
ECD_03121 +1.7 1.9 putative membrane protein compare
ECD_02042 +1.7 2.3 DUF2574 family protein compare
ECD_01375 +1.6 2.4 putative periplasmic protein compare
ECD_01032 +1.4 2.9 redox enzyme maturation protein (REMP) chaperone for YcdX compare
ECD_01586 +1.2 2.1 beta-D-glucuronidase compare
ECD_03355 +1.1 1.6 Putative LuxR family repressor for dicarboxylate transport compare
ECD_01928 +1.1 2.0 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase compare
ECD_01575 +1.1 1.3 dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme compare
ECD_04212 +1.1 2.4 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB compare
ECD_00941 +1.0 2.2 NAD(P)H-dependent FMN reductase compare
ECD_01897 +1.0 1.5 ssuEADCB/tauABCD operon transcriptional activator compare
ECD_03999 +1.0 2.0 antitoxin of GhoTS toxin-antitoxin pair; endonuclease for ghoT mRNA compare
ECD_00925 +1.0 1.8 putative S-adenosyl-L-methionine-dependent methyltransferase compare
ECD_01614 +0.9 2.3 putative membrane fusion protein (MFP) of YdhJK efflux pump compare
ECD_00255 +0.8 2.6 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein compare
ECD_02348 +0.8 1.9 ethanolamine utilization protein, putative carboxysome structural protein compare
ECD_01498 +0.8 1.4 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase compare
ECD_00329 +0.8 1.5 anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein compare
ECD_00956 +0.8 1.3 DUF330 family putative lipoprotein compare
ECD_03407 +0.8 2.3 toxic polypeptide, small compare
ECD_01006 +0.8 1.3 uncharacterized protein compare
ECD_00937 +0.8 2.2 aliphatic sulfonate ABC transporter ATPase compare
ECD_03252 +0.8 4.2 ribosome-associated heat shock protein Hsp15 compare
ECD_02034 +0.8 1.5 hypothetical protein compare
ECD_03040 +0.8 1.8 preprotein translocase membrane subunit compare
ECD_01624 +0.7 1.4 glutaredoxin-4 compare
ECD_00981 +0.7 2.7 cytochrome bd-II oxidase, subunit I compare
ECD_01912 +0.7 1.1 DNA gyrase inhibitor compare
ECD_01828 +0.7 1.5 zinc ABC transporter periplasmic binding protein compare
ECD_00811 +0.7 2.2 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis compare
ECD_01969 +0.7 1.9 inner membrane protein compare
ECD_00681 +0.7 1.0 succinate dehydrogenase, membrane subunit, binds cytochrome b556 compare
ECD_02250 +0.7 1.1 uncharacterized protein compare
ECD_01104 +0.7 0.9 putative UPF0227 family esterase compare
ECD_00830 +0.7 1.3 hypothetical protein compare
ECD_03660 +0.7 1.0 rho operon leader peptide compare
ECD_00026 +0.7 2.5 hypothetical protein compare
ECD_01668 +0.7 1.4 putative oxidoreductase compare
ECD_03530 +0.7 1.1 hypothetical protein compare
ECD_00195 +0.7 1.9 putative outer membrane protein compare
ECD_03308 +0.7 1.4 PanD autocleavage accelerator, panothenate synthesis compare
ECD_01872 +0.6 1.7 lipoprotein, function unknown compare
ECD_00803 +0.6 0.9 repressor of biofilm formation by indole transport regulation compare
ECD_00242 +0.6 1.3 moco insertion factor for PaoABC aldehyde oxidoreductase compare
ECD_02194 +0.6 1.9 GNAT family putative N-acetyltransferase compare
ECD_02920 +0.6 1.7 DUF1449 family inner membrane protein compare
ECD_02162 +0.6 1.1 ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance compare
ECD_03695 +0.6 0.9 Magnesium and cobalt transport protein corA compare
ECD_02901 +0.6 1.5 quinol monooxygenase compare
ECD_04119 +0.6 0.9 SopA-central-domain-like hexapeptide repeat protein compare
ECD_04177 +0.6 2.9 N-acetylneuraminic acid mutarotase compare
ECD_00492 +0.6 0.9 hypothetical protein compare
ECD_01773 +0.6 1.1 putative YeaWX dioxygenase beta subunit, reductase component compare
ECD_01907 +0.6 2.2 hypothetical protein compare
ECD_03798 +0.6 1.4 response regulator in two-component regulatory system with CpxA compare
ECD_00420 +0.6 1.1 adenine phosphoribosyltransferase compare
ECD_00988 +0.6 2.2 putative O-antigen capsule production periplasmic protein compare
ECD_00196 +0.6 2.2 DL-methionine transporter subunit compare
ECD_01857 +0.6 1.4 methyl-accepting chemotaxis protein II compare
ECD_01810 +0.6 1.9 DUF2511 family protein compare
ECD_00858 +0.6 1.1 negative regulator of motility; multicopy suppressor of coaA(Ts) compare
ECD_02113 +0.6 2.2 16S rRNA pseudouridine(516) synthase compare
ECD_01869 +0.6 1.4 L-arabinose ABC transporter periplasmic binding protein compare
ECD_01189 +0.6 1.3 transglutaminase-like TPR-repeat protein compare
ECD_04373 +0.6 2.0 UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system compare
ECD_01302 +0.6 1.6 L-Ala-D/L-Glu epimerase compare
ECD_00452 +0.6 2.1 putative DNA-binding transcriptional regulator compare
ECD_02915 +0.6 1.4 putative fimbrial-like adhesin protein compare
ECD_03867 +0.6 1.8 thiamine biosynthesis ThiGH complex subunit compare
ECD_03729 +0.6 1.3 TatABCE protein translocation system subunit compare
ECD_01632 +0.6 2.6 cyclopropane fatty acyl phospholipid synthase, SAM-dependent compare
ECD_03353 +0.6 1.6 hypothetical protein compare
ECD_01486 +0.6 1.1 UPF0056 family inner membrane protein compare
ECD_00260 +0.6 1.1 reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family compare
ECD_01694 +0.6 1.0 fructosamine kinase family protein compare
ECD_03962 +0.6 2.4 ribose 5-phosphate isomerase B/allose 6-phosphate isomerase compare
ECD_03645 +0.6 1.4 ilvG operon leader peptide compare
ECD_01820 +0.6 1.4 phosphoribosylglycinamide formyltransferase 2 compare
ECD_00399 +0.6 1.3 putative DNA-binding transcriptional regulator compare
ECD_04048 +0.6 1.2 DUF2170 family protein compare
ECD_01043 +0.5 1.7 stationary phase cardiolipin synthase 3 compare
ECD_01261 +0.5 1.2 global regulator of transcription; DeoR family compare
ECD_00582 +0.5 1.8 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
ECD_04346 +0.5 1.4 hypothetical protein compare
ECD_01755 +0.5 1.2 putative diguanylate cyclase compare
ECD_00032 +0.5 1.0 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) compare
ECD_01174 +0.5 1.3 dihydroxyacetone kinase, C-terminal domain compare
ECD_00326 +0.5 0.9 DUF2755 family inner membrane protein compare
ECD_01126 +0.5 1.7 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase compare
ECD_00870 +0.5 1.2 lipoprotein compare
ECD_04041 +0.5 1.4 modulator for HflB protease specific for phage lambda cII repressor compare
ECD_02474 +0.5 1.7 uracil-DNA-glycosylase compare
ECD_00930 +0.5 1.2 M15A protease-related family periplasmic protein compare
ECD_01814 +0.5 0.7 C-N hydrolase family protein compare
ECD_01063 +0.5 1.5 UPF0502 family protein compare
ECD_04132 +0.5 2.3 5-keto-D-gluconate-5-reductase compare
ECD_02073 +0.5 1.6 DUF218 superfamily vancomycin high temperature exclusion protein compare
ECD_00617 +0.5 1.8 ribonucleoside hydrolase 1 compare
ECD_00377 +0.5 1.0 putative acetyltransferase compare
ECD_02226 +0.5 1.3 glutathione S-transferase compare
ECD_01915 +0.5 0.8 putative TusA family sulfurtransferase compare
ECD_01109 +0.5 0.9 L,D-transpeptidase linking Lpp to murein compare
ECD_00385 +0.5 1.7 putative lipoprotein compare
ECD_00996 +0.5 1.8 hybrid sensory histidine kinase in two-component regulatory system with TorR compare
ECD_03357 +0.5 0.7 acid-resistance protein compare
ECD_03358 +0.5 0.7 stress response protein acid-resistance protein compare
ECD_00481 +0.5 1.1 putative periplasmic pilus chaperone compare
ECD_01066 +0.5 1.9 export chaperone for FlgK and FlgL compare
ECD_01693 +0.5 1.2 uncharacterized protein compare
ECD_01321 +0.5 1.8 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein compare
ECD_02077 +0.5 1.5 methyl-galactoside transporter subunit compare
ECD_00550 +0.5 3.9 ferrienterobactin outer membrane transporter compare
ECD_02746 +0.5 1.2 hypothetical protein compare
ECD_00274 +0.5 1.0 ankyrin repeat protein compare
ECD_01049 +0.5 1.2 putative drug efflux system protein compare
ECD_00376 +0.5 1.7 hypothetical protein compare
ECD_01481 +0.5 1.1 glutaminase 2 compare
ECD_00939 +0.5 1.2 alkanesulfonate monooxygenase, FMNH(2)-dependent compare
ECD_00441 +0.5 1.4 iron export ABC transporter ATPase; peroxide resistance protein compare
ECD_00813 +0.5 0.8 transcriptional regulator of csgD and ybiJI; autoregulator compare
ECD_00157 +0.5 1.5 vitamin B12 ABC transporter periplasmic binding protein compare
ECD_00494 +0.5 0.9 DLP12 prophage; putative recombinase compare
ECD_04251 +0.5 1.2 salt-inducible putative ABC transporter periplasmic binding protein compare
ECD_01427 +0.5 0.9 nitrate/nitrite transporter compare
ECD_00651 +0.5 1.1 response regulator in two-component regulatory system with KdpD compare
ECD_00430 +0.5 1.7 putative fosmidomycin efflux system protein compare
ECD_00848 +0.4 1.2 bacteriophage tail fiber protein compare
ECD_02874 +0.4 1.8 DUF2623 family protein compare
ECD_00417 +0.4 1.8 DUF2496 family protein compare
ECD_00231 +0.4 1.4 peptide chain release factor 2 compare
ECD_00832 +0.4 1.8 putative capsid portal protein compare
ECD_03927 +0.4 2.0 acid phosphatase/phosphotransferase, class B, non-specific compare
ECD_01281 +0.4 2.0 regulatory protein for phage-shock-protein operon compare
ECD_02284 +0.4 1.0 formyl-CoA transferase, NAD(P)-binding compare
ECD_01432 +0.4 1.8 formate dehydrogenase-N, alpha subunit, nitrate-inducible compare
ECD_01275 +0.4 1.6 gamma-glutamyl-gamma-aminobutyrate hydrolase compare
ECD_02392 +0.4 1.9 phosphoribosylglycinamide formyltransferase 1 compare
ECD_01916 +0.4 1.9 UPF0394 family inner membrane protein compare
ECD_00704 +0.4 1.0 nicotinamide riboside transporter compare
ECD_01926 +0.4 1.0 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase compare
ECD_01018 +0.4 1.4 proline:sodium symporter compare
ECD_02256 +0.4 1.1 putative DNA endonuclease compare
ECD_02056 +0.4 1.2 transcriptional activator of csgD and csgBA compare
ECD_01706 +0.4 0.9 N,N'-diacetylchitobiose-specific enzyme IIC component of PTS compare
ECD_02828 +0.4 2.3 Polysialic acid transport protein kpsM compare
ECD_02266 +0.4 2.1 beta-ketoacyl-CoA thiolase, anaerobic, subunit compare
ECD_04167 +0.4 1.9 putative phosphotransferase enzyme IIA component compare
ECD_04261 +0.4 1.7 hypothetical protein compare
ECD_00533 +0.4 1.0 copper/silver efflux system, outer membrane component compare
ECD_02107 +0.4 1.5 microcin C ABC transporter periplasmic binding protein compare
ECD_02951 +0.4 0.7 antitoxinof the HigB-HigA toxin-antitoxin system compare
ECD_01786 +0.4 0.7 putative membrane protein/conserved protein compare
ECD_00073 +0.4 1.3 3-isopropylmalate dehydratase small subunit compare
ECD_01226 +0.4 1.1 membrane spanning protein in TonB-ExbB-ExbD transport complex compare
ECD_00585 +0.4 1.1 citrate lyase, acyl carrier (gamma) subunit compare
ECD_04137 +0.4 1.7 hypothetical protein compare
ECD_02128 +0.4 1.3 heme export ABC transporter ATPase compare
ECD_02294 +0.4 1.8 aminopeptidase compare
ECD_03083 +0.4 2.0 putative N-acetylmannosamine-6-P epimerase compare
ECD_02103 +0.4 0.9 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein compare
ECD_01279 +0.4 1.4 4-aminobutyrate aminotransferase, PLP-dependent compare
ECD_02345 +0.4 1.1 ethanolamine utilization protein, HSP70/actin superfamily protein compare
ECD_02814 +0.4 1.7 hypothetical protein compare
ECD_01879 +0.4 0.5 response regulator in two-component regulatory system with BarA compare
ECD_00955 +0.4 0.6 paraquat-inducible, SoxRS-regulated MCE domain protein compare
ECD_00226 +0.4 1.5 DNA polymerase IV compare
ECD_03877 +0.4 0.9 HU, DNA-binding transcriptional regulator, alpha subunit compare
ECD_00596 +0.4 0.8 TatABCE protein translocation system subunit compare
ECD_01235 +0.4 1.0 tryptophan synthase, beta subunit compare
ECD_02897 +0.4 1.9 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC compare
ECD_00285 +0.4 2.2 propionate catabolism operon regulatory protein compare
ECD_01301 +0.4 0.8 lipid hydroperoxide peroxidase compare
ECD_01752 +0.4 1.1 protein kinase, endogenous substrate unidentified; autokinase compare
ECD_01405 +0.4 0.7 methionine N-acyltransferase; L-amino acid N-acyltransferase compare
ECD_03895 +0.4 1.9 DUF3811 family protein compare
ECD_04023 +0.4 2.0 fumarate reductase (anaerobic), membrane anchor subunit compare
ECD_03350 +0.4 0.7 arsenical resistance operon transcriptional repressor; autorepressor compare
ECD_02192 +0.4 0.8 isochorismate synthase 2 compare
ECD_02088 +0.4 1.5 endonuclease IV with intrinsic 3'-5' exonuclease activity compare
ECD_01236 +0.4 1.8 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase compare
ECD_02841 +0.4 1.3 bifunctional prepilin leader peptidase/ methylase compare
ECD_01650 +0.4 1.1 component of SufBCD Fe-S cluster assembly scaffold compare
ECD_00246 +0.4 1.1 DUF1440 family inner membrane acid resistance protein compare
ECD_04178 +0.4 1.6 N-acetylnuraminic acid outer membrane channel protein compare
ECD_03249 +0.4 1.6 adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase compare
ECD_03758 +0.4 1.5 putative sugar phosphate isomerase compare
ECD_01314 +0.4 1.3 p-aminobenzoyl-glutamate hydrolase, B subunit compare
ECD_01122 +0.4 0.8 spermidine/putrescine ABC transporter permease compare
ECD_00968 +0.4 1.1 UPF0319 family protein compare
ECD_01217 +0.3 2.0 oligopeptide ABC transporter periplasmic binding protein compare
ECD_01859 +0.3 1.1 fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein compare
ECD_02743 +0.3 1.6 5-formyltetrahydrofolate cyclo-ligase family protein compare
ECD_00804 +0.3 1.4 soluble aldose sugar dehydrogenase compare
ECD_00938 +0.3 0.8 aliphatic sulfonate ABC transporter permease compare
ECD_02122 +0.3 0.7 periplasmic thioredoxin of cytochrome c-type biogenesis compare
ECD_03383 +0.3 2.2 DUF2629 family protein compare
ECD_01223 +0.3 1.1 cardiolipin synthase 1 compare
ECD_02811 +0.3 2.0 hypothetical protein compare
ECD_00513 +0.3 0.9 hypothetical protein compare
ECD_04156 +0.3 1.5 ferric citrate ABC transporter periplasmic binding protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms