Experiment set6S14 for Escherichia coli ECOR27

Compare to:

Bas83

200 most important genes:

  gene name fitness t score description  
NOLOHH_04525 miaA -4.1 -2.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_24495 -3.9 -1.8 lngG compare
NOLOHH_17705 ydiO -3.5 -3.3 acyl-CoA dehydrogenase compare
NOLOHH_11495 xerD -3.1 -3.7 site-specific tyrosine recombinase XerD compare
NOLOHH_06530 corA -3.1 -3.0 magnesium/cobalt transporter CorA compare
NOLOHH_20460 galU -3.0 -2.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_05815 metL -3.0 -12.0 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_18620 ydfJ -2.9 -2.0 Putative transporter YdfJ compare
NOLOHH_06675 wzxE -2.6 -6.1 lipid III flippase WzxE compare
NOLOHH_07575 rfaF -2.6 -3.0 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_06550 xerC -2.6 -3.8 tyrosine recombinase XerC compare
NOLOHH_13865 crr -2.5 -1.6 PTS glucose transporter subunit IIA compare
NOLOHH_16665 cmoB -2.5 -2.9 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
NOLOHH_11515 lysS -2.4 -2.7 lysine--tRNA ligase compare
NOLOHH_24675 finO -2.3 -7.8 Fertility inhibition protein compare
NOLOHH_18070 rsxB -2.2 -1.7 electron transport complex subunit RsxB compare
NOLOHH_23310 odhB -2.2 -2.0 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_24475 -2.1 -1.4 pilus assembly protein compare
NOLOHH_17675 ydiT -2.1 -2.2 Ferredoxin-like protein YdiT compare
NOLOHH_22435 dgcI -2.1 -2.7 putative diguanylate cyclase DgcI compare
NOLOHH_06665 wzyE -2.1 -5.1 ECA oligosaccharide polymerase compare
NOLOHH_18305 ynfA -2.0 -1.8 YnfA family protein compare
NOLOHH_06920 mnmG -2.0 -4.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_21130 yceD -1.9 -2.6 23S rRNA accumulation protein YceD compare
NOLOHH_03190 apaH -1.9 -5.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_15615 dcd -1.9 -3.2 dCTP deaminase compare
NOLOHH_02285 hcp1,tssD1 -1.9 -2.0 type VI secretion system protein, Hcp family compare
NOLOHH_13415 guaA -1.9 -2.1 glutamine-hydrolyzing GMP synthase compare
NOLOHH_20465 rssB -1.8 -3.1 two-component system response regulator RssB compare
NOLOHH_16985 yebQ -1.8 -3.0 Uncharacterized transporter YebQ compare
NOLOHH_01270 clpP -1.8 -2.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_11770 yqeL -1.7 -1.9 Uncharacterized protein YqeL compare
NOLOHH_06540 uvrD -1.7 -11.1 DNA helicase II compare
NOLOHH_05490 hupA -1.7 -2.2 DNA-binding protein HU-alpha compare
NOLOHH_02845 aceE -1.7 -1.9 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_22820 -1.6 -5.1 Phage-tail-NK domain-containing protein compare
NOLOHH_19420 ydbD -1.6 -2.3 Uncharacterized protein YdbD compare
NOLOHH_03340 -1.6 -1.6 fimbrial family protein compare
NOLOHH_09835 obgE -1.6 -1.6 GTPase ObgE compare
NOLOHH_20815 -1.6 -2.4 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_23315 sucA -1.6 -1.4 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_14935 rsuA -1.6 -1.9 16S rRNA pseudouridine(516) synthase RsuA compare
NOLOHH_23035 -1.6 -3.8 DUF5405 domain-containing protein compare
NOLOHH_23065 -1.6 -2.1 hypothetical protein compare
NOLOHH_13075 lepA -1.6 -3.6 translation elongation factor 4 compare
NOLOHH_14200 sixA -1.5 -2.4 phosphohistidine phosphatase SixA compare
NOLOHH_00545 -1.5 -3.1 Major capsid protein compare
NOLOHH_17755 menI -1.5 -1.9 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
NOLOHH_20745 dsbB -1.5 -2.8 disulfide bond formation protein DsbB compare
NOLOHH_22835 -1.5 -3.4 hypothetical protein compare
NOLOHH_03170 surA -1.4 -4.0 peptidylprolyl isomerase SurA compare
NOLOHH_08775 -1.4 -4.1 NfuA family Fe-S biogenesis protein compare
NOLOHH_24240 -1.4 -1.5 transglycosylase SLT domain-containing protein compare
NOLOHH_14475 nuoE -1.4 -2.1 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_05965 pfkA -1.4 -4.9 6-phosphofructokinase compare
NOLOHH_22050 serC -1.4 -7.0 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_22850 -1.4 -8.1 portal protein compare
NOLOHH_20750 umuC -1.4 -2.4 DNA polymerase V catalytic protein compare
NOLOHH_22935 ninB -1.4 -5.8 Protein ninB compare
NOLOHH_17425 astA -1.4 -2.6 arginine N-succinyltransferase compare
NOLOHH_22840 -1.4 -9.3 head protein compare
NOLOHH_22920 -1.4 -1.9 protein ninF compare
NOLOHH_14455 -1.3 -1.5 hypothetical protein compare
NOLOHH_22815 -1.3 -5.9 DUF2824 domain-containing protein compare
NOLOHH_20940 potB -1.3 -1.9 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_00240 -1.3 -1.7 Entry exclusion protein compare
NOLOHH_11110 rdgB -1.3 -3.7 XTP/dITP diphosphatase compare
NOLOHH_15485 yegS -1.3 -2.8 lipid kinase YegS compare
NOLOHH_22855 -1.3 -5.1 PBSX family phage terminase large subunit compare
NOLOHH_24300 -1.3 -1.9 Uncharacterized protein YubJ compare
NOLOHH_13035 srmB -1.3 -6.3 ATP-dependent RNA helicase SrmB compare
NOLOHH_08720 glpD -1.3 -5.2 glycerol-3-phosphate dehydrogenase compare
NOLOHH_14300 usg -1.3 -3.4 aspartate-semialdehyde dehydrogenase compare
NOLOHH_04165 treC -1.3 -4.1 alpha,alpha-phosphotrehalase compare
NOLOHH_09875 secG -1.3 -1.7 preprotein translocase subunit SecG compare
NOLOHH_18050 rsxE -1.3 -1.7 electron transport complex subunit RsxE compare
NOLOHH_14340 ubiX -1.3 -2.0 flavin prenyltransferase UbiX compare
NOLOHH_23245 tolA -1.3 -3.2 cell envelope integrity protein TolA compare
NOLOHH_16195 hprR -1.3 -2.4 response regulator transcription factor HprR compare
NOLOHH_11790 yqeH -1.3 -2.1 Uncharacterized protein YqeH compare
NOLOHH_22945 ren -1.3 -4.1 Protein ren compare
NOLOHH_23510 fur -1.2 -1.8 ferric iron uptake transcriptional regulator compare
NOLOHH_12805 rnfH -1.2 -2.2 RnfH family protein compare
NOLOHH_09695 arcB -1.2 -4.2 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_22930 -1.2 -4.6 phage N-6-adenine-methyltransferase compare
NOLOHH_14495 nuoI -1.2 -2.5 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_17405 ydjY -1.2 -2.6 Uncharacterized protein YdjY compare
NOLOHH_16905 holE -1.2 -1.9 DNA polymerase III subunit theta compare
NOLOHH_11230 tkt -1.2 -1.5 transketolase compare
NOLOHH_12545 recA -1.2 -2.5 recombinase RecA compare
NOLOHH_23050 -1.2 -3.7 Ead/Ea22-like protein compare
NOLOHH_22825 -1.2 -5.9 Packaged DNA stabilization protein gp10 compare
NOLOHH_00615 quuD -1.2 -1.0 antitermination protein QuuD compare
NOLOHH_22830 -1.1 -5.7 packaged DNA stabilization protein p27 compare
NOLOHH_17365 nudG -1.1 -1.3 CTP pyrophosphohydrolase compare
NOLOHH_14465 nuoB -1.1 -4.2 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_23480 pgm -1.1 -2.3 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_23300 sucD -1.1 -4.1 succinate--CoA ligase subunit alpha compare
NOLOHH_20675 dhaM -1.1 -1.9 dihydroxyacetone kinase phosphoryl donor subunit DhaM compare
NOLOHH_01255 lon_P403L -1.1 -5.1 Lon protease compare
NOLOHH_18245 mlc -1.1 -1.2 DNA-binding transcriptional repressor Mlc compare
NOLOHH_22905 ninH -1.1 -1.9 Protein ninH compare
NOLOHH_20110 puuB -1.1 -2.1 gamma-glutamylputrescine oxidase compare
NOLOHH_14505 nuoK -1.1 -2.0 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_20830 -1.1 -1.5 Autotransporter domain-containing protein compare
NOLOHH_11775 yqeJ -1.1 -1.1 Uncharacterized protein YqeJ compare
NOLOHH_10650 ygiZ -1.1 -2.8 Inner membrane protein YgiZ compare
NOLOHH_18155 fumC -1.1 -1.3 class II fumarate hydratase compare
NOLOHH_07535 rfaG -1.1 -3.8 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_23995 fes -1.1 -2.6 enterobactin/ferric enterobactin esterase compare
NOLOHH_00720 -1.1 -2.0 cruciferin compare
NOLOHH_11365 rpiA -1.1 -1.5 ribose-5-phosphate isomerase RpiA compare
NOLOHH_21380 cgsE -1.1 -0.8 curli production assembly/transport protein CsgE compare
NOLOHH_22940 -1.1 -3.8 NinA compare
NOLOHH_17110 yeaY -1.1 -1.4 Slp family lipoprotein YeaY compare
NOLOHH_18315 rspB -1.1 -1.6 Zn-dependent oxidoreductase compare
NOLOHH_23020 -1.0 -2.0 hypothetical protein compare
NOLOHH_17130 yeaX -1.0 -2.4 carnitine monooxygenase subunit YeaX compare
NOLOHH_13070 rseC -1.0 -2.7 SoxR-reducing system protein RseC compare
NOLOHH_24460 -1.0 -1.4 LngX2 compare
NOLOHH_22330 potF -1.0 -3.1 spermidine/putrescine ABC transporter substrate-binding protein PotF compare
NOLOHH_07540 rfaP -1.0 -3.8 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_04005 Leu_trna -1.0 -0.9 tRNA-Leu(caa) compare
NOLOHH_22845 -1.0 -3.0 phage capsid protein compare
NOLOHH_07985 tag -1.0 -2.2 DNA-3-methyladenine glycosylase I compare
NOLOHH_14470 nuoC -1.0 -3.6 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_00360 -1.0 -6.4 relaxase/mobilization nuclease compare
NOLOHH_00525 -1.0 -1.2 Tail tube terminator protein compare
NOLOHH_07125 -1.0 -2.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_05230 plsB -1.0 -1.6 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_23235 pal -1.0 -1.9 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_21450 pgaB -1.0 -1.5 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
NOLOHH_16330 fliI -1.0 -2.4 flagellum-specific ATP synthase FliI compare
NOLOHH_22790 -1.0 -3.6 phage head-binding domain-containing protein compare
NOLOHH_18420 quuQ -1.0 -2.1 Prophage antitermination Q-like protein QuuQ compare
NOLOHH_08865 nudE -1.0 -3.0 ADP compounds hydrolase NudE compare
NOLOHH_15455 gatZ -1.0 -1.8 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_22810 -1.0 -6.2 DNA transfer protein compare
NOLOHH_14460 nuoA -1.0 -2.1 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_22870 -1.0 -3.2 lysis protein compare
NOLOHH_10560 yqiI -1.0 -2.8 Uncharacterized protein YqiI compare
NOLOHH_14160 Arg_trna -1.0 -2.1 tRNA-Arg(cct) compare
NOLOHH_09610 zapG -1.0 -4.0 Z-ring associated protein ZapG compare
NOLOHH_24185 tfa -1.0 -2.0 Tail fiber assembly protein compare
NOLOHH_17775 sufB -1.0 -2.3 Fe-S cluster assembly protein SufB compare
NOLOHH_06410 tatB -1.0 -4.4 Sec-independent protein translocase protein TatB compare
NOLOHH_22880 -1.0 -4.3 phage holin, lambda family compare
NOLOHH_09645 nanR -1.0 -3.8 transcriptional regulator NanR compare
NOLOHH_23055 -0.9 -2.0 DUF550 domain-containing protein compare
NOLOHH_19625 -0.9 -1.2 phage tail protein compare
NOLOHH_19845 recT -0.9 -1.3 recombination protein RecT compare
NOLOHH_21050 -0.9 -0.7 DUF1425 domain-containing protein compare
NOLOHH_09955 deaD -0.9 -2.0 ATP-dependent RNA helicase DeaD compare
NOLOHH_23000 ea10 -0.9 -2.1 Protein ea10 compare
NOLOHH_13320 iscX -0.9 -0.9 Fe-S cluster assembly protein IscX compare
NOLOHH_24530 -0.9 -2.3 HTH-21 domain-containing protein compare
NOLOHH_23030 -0.9 -1.5 siphovirus Gp157 family protein compare
NOLOHH_05225 dgkA -0.9 -2.0 diacylglycerol kinase compare
NOLOHH_16275 dsrB -0.9 -1.3 protein DsrB compare
NOLOHH_16290 fliQ -0.9 -0.7 flagellar biosynthesis protein FliQ compare
NOLOHH_15555 -0.9 -2.0 Type I toxin-antitoxin system Ibs family toxin compare
NOLOHH_17845 ydhT -0.9 -1.7 protein YdhT compare
NOLOHH_23350 fimA -0.9 -1.1 type 1 fimbrial protein compare
NOLOHH_13715 eutM -0.9 -2.4 ethanolamine utilization microcompartment protein EutM compare
NOLOHH_19080 narU -0.9 -1.6 nitrate/nitrite transporter NarU compare
NOLOHH_14500 nuoJ -0.9 -2.5 NADH-quinone oxidoreductase subunit J compare
NOLOHH_22890 Asn_trna -0.9 -2.1 tRNA-Asn(gtt) compare
NOLOHH_20280 sohB -0.9 -1.9 protease SohB compare
NOLOHH_13480 arsC -0.9 -1.7 arsenate reductase (glutaredoxin) compare
NOLOHH_24470 -0.9 -1.2 prepilin-type cleavage/methylation domain-containing protein compare
NOLOHH_19045 yddM -0.9 -1.2 HigA family addiction module antitoxin compare
NOLOHH_16640 cutC -0.9 -2.7 copper homeostasis protein CutC compare
NOLOHH_19480 paaC -0.9 -1.9 phenylacetate-CoA oxygenase subunit PaaC compare
NOLOHH_00445 -0.9 -1.9 peptidyl-arginine deiminase compare
NOLOHH_20735 fadR -0.9 -1.0 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_20080 pspD -0.9 -1.0 phage shock protein PspD compare
NOLOHH_20400 oppF -0.9 -1.9 murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF compare
NOLOHH_15225 mlrA -0.9 -2.0 HTH-type transcriptional regulator MlrA compare
NOLOHH_23040 -0.9 -3.3 hypothetical protein compare
NOLOHH_06590 cyaA -0.9 -4.3 class I adenylate cyclase compare
NOLOHH_15130 yeiS -0.9 -2.5 Uncharacterized protein YeiS compare
NOLOHH_17170 insQ -0.9 -0.8 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_17810 pykF -0.9 -1.9 pyruvate kinase PykF compare
NOLOHH_21480 efeB -0.8 -1.5 iron uptake transporter deferrochelatase/peroxidase subunit compare
NOLOHH_10655 qseC -0.8 -4.2 two-component system sensor histidine kinase QseC compare
NOLOHH_22910 ninG -0.8 -2.4 Protein ninG compare
NOLOHH_07610 envC -0.8 -5.5 murein hydrolase activator EnvC compare
NOLOHH_05335 pgi -0.8 -5.6 glucose-6-phosphate isomerase compare
NOLOHH_20665 dhaK -0.8 -1.6 dihydroxyacetone kinase subunit DhaK compare
NOLOHH_24500 -0.8 -1.5 pilus assembly protein compare
NOLOHH_03030 cra -0.8 -3.6 catabolite repressor/activator compare
NOLOHH_11705 -0.8 -2.2 PrgH/EprH family type III secretion apparatus protein compare
NOLOHH_22800 -0.8 -5.4 DNA transfer protein compare
NOLOHH_19295 ydcL -0.8 -1.7 Uncharacterized lipoprotein YdcL compare
NOLOHH_18765 glsB -0.8 -1.2 glutaminase B compare
NOLOHH_00485 -0.8 -3.8 Phage-related protein, tail assembly protein I compare
NOLOHH_23025 -0.8 -3.7 DNA recombinase compare
NOLOHH_13060 rseB -0.8 -3.5 sigma-E factor regulatory protein RseB compare
NOLOHH_00575 -0.8 -1.4 DNA-packaging protein compare
NOLOHH_01960 ykgR -0.8 -0.8 Uncharacterized membrane protein YkgR compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms