Experiment set6S133 for Escherichia coli BL21

Compare to:

Bas06

200 most detrimental genes:

  gene name fitness t score description  
ECD_01565 +1.7 4.4 putative arabinose efflux transporter compare
ECD_04077 +1.2 6.1 putative transcriptional regulator compare
ECD_03086 +1.1 3.0 sialic acid-inducible nan operon repressor compare
ECD_01812 +1.1 3.1 CopC family protein compare
ECD_01854 +1.1 2.3 fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA compare
ECD_00704 +1.1 2.7 nicotinamide riboside transporter compare
ECD_00673 +1.0 2.5 UPF0271 family protein compare
ECD_01695 +1.0 1.7 putative inner membrane protein compare
ECD_02305 +0.9 2.5 DUF1323 family putative DNA-binding protein compare
ECD_03999 +0.9 1.9 antitoxin of GhoTS toxin-antitoxin pair; endonuclease for ghoT mRNA compare
ECD_00940 +0.9 2.1 aliphatic sulfonate ABC transporter periplasmic binding protein compare
ECD_03797 +0.9 4.9 sensory histidine kinase in two-component regulatory system with CpxR compare
ECD_03695 +0.9 1.5 Magnesium and cobalt transport protein corA compare
ECD_03001 +0.9 2.2 putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine/galactosamine PTS system enzyme IIA component) compare
ECD_02989 +0.8 5.1 glycerate kinase I compare
ECD_02172 +0.8 2.9 putative L-rhamnonate transporter compare
ECD_02118 +0.8 2.7 essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor compare
ECD_00695 +0.8 1.8 putative inner membrane protein in cydABX-ybgE operon compare
ECD_03355 +0.8 1.3 Putative LuxR family repressor for dicarboxylate transport compare
ECD_02318 +0.8 0.8 pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase compare
ECD_00811 +0.8 2.1 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis compare
ECD_00242 +0.7 2.0 moco insertion factor for PaoABC aldehyde oxidoreductase compare
ECD_00702 +0.7 2.0 periplasmic TolA-binding protein compare
ECD_00803 +0.7 1.3 repressor of biofilm formation by indole transport regulation compare
ECD_02998 +0.7 1.8 N-acetylgalactosamine-specific enzyme IIB component of PTS compare
ECD_00260 +0.7 1.1 reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family compare
ECD_02909 +0.7 2.2 DUF1190 family protein compare
ECD_02459 +0.7 1.9 gap repair protein compare
ECD_02288 +0.7 2.0 palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase compare
ECD_00432 +0.7 1.4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase compare
ECD_00257 +0.7 2.1 putative DNA-binding transcriptional regulator compare
ECD_00810 +0.7 1.7 uncharacterized protein compare
ECD_00339 +0.7 1.5 hypothetical protein compare
ECD_01657 +0.7 2.2 UPF0118 family inner membrane protein compare
ECD_02438 +0.7 1.9 putative sugar ABC transporter permease compare
ECD_01313 +0.7 2.5 p-aminobenzoyl-glutamate transporter; membrane protein compare
ECD_01107 +0.7 1.9 repressor for bhsA(ycfR) compare
ECD_00999 +0.7 1.7 trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit compare
ECD_01441 +0.7 0.8 D,D-dipeptide ABC transporter ATPase compare
ECD_03308 +0.6 1.3 PanD autocleavage accelerator, panothenate synthesis compare
ECD_02034 +0.6 1.4 hypothetical protein compare
ECD_01078 +0.6 2.7 flagellar hook-filament junction protein 1 compare
ECD_02310 +0.6 1.5 DUF3820 family protein compare
ECD_01225 +0.6 1.0 putative DGPF domain-containing enzyme compare
ECD_03207 +0.6 1.6 OsmC family protein compare
ECD_01022 +0.6 1.6 ATP-binding protein; putative PhoH family P-loop ATPase compare
ECD_01227 +0.6 2.0 acyl-CoA esterase compare
ECD_03711 +0.6 2.5 hypothetical protein compare
ECD_00018 +0.6 1.2 sodium-proton antiporter compare
ECD_01827 +0.6 2.8 murein DD-endopeptidase, space-maker hydrolase, septation protein compare
ECD_00753 +0.6 1.2 putative acetate transporter; BAX Inhibitor-1 family inner membrane protein compare
ECD_02694 +0.6 0.7 putative LuxR family transcriptional regulator compare
ECD_01852 +0.6 1.2 chemotaxis regulator, protein phosphatase for CheY compare
ECD_03950 +0.6 1.8 Sel1 family TPR-like repeat protein compare
ECD_00338 +0.6 2.0 UPF0345 family protein compare
ECD_02256 +0.6 1.8 putative DNA endonuclease compare
ECD_02177 +0.6 1.0 nucleoside triphosphatase compare
ECD_03017 +0.6 1.1 outer membrane lipoprotein compare
ECD_01396 +0.6 1.1 putative DNA-binding transcriptional regulator and putative aminotransferase compare
ECD_01300 +0.6 1.7 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase compare
ECD_04063 +0.6 1.9 3-keto-L-gulonate 6-phosphate decarboxylase compare
ECD_01215 +0.6 2.9 fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase compare
ECD_01632 +0.6 2.6 cyclopropane fatty acyl phospholipid synthase, SAM-dependent compare
ECD_00995 +0.5 1.4 putative 4Fe-4S membrane protein compare
ECD_01620 +0.5 1.4 chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme compare
ECD_03699 +0.5 2.1 4HBT thioesterase family protein compare
ECD_01472 +0.5 1.3 autoinducer 2 import system permease protein compare
ECD_02042 +0.5 1.1 DUF2574 family protein compare
ECD_00696 +0.5 2.1 acyl-CoA thioester hydrolase compare
ECD_02951 +0.5 0.8 antitoxinof the HigB-HigA toxin-antitoxin system compare
ECD_01825 +0.5 1.5 pyruvate kinase II compare
ECD_01956 +0.5 1.7 putative glycosyl transferase compare
ECD_02732 +0.5 0.8 UPF0267 family protein compare
ECD_04388 +0.5 1.5 putative membrane-bound BasS regulator compare
ECD_04015 +0.5 1.4 uncharacterized protein compare
ECD_03878 +0.5 2.3 DUF1481 family putative lipoprotein compare
ECD_01624 +0.5 0.9 glutaredoxin-4 compare
ECD_01281 +0.5 1.9 regulatory protein for phage-shock-protein operon compare
ECD_01443 +0.5 0.9 D,D-dipeptide ABC transporter permease compare
ECD_02609 +0.5 2.6 sulfite reductase, alpha subunit, flavoprotein compare
ECD_02995 +0.5 1.3 toxin of the SohB(PrlF)-YhaV toxin-antitoxin system compare
ECD_00296 +0.5 1.0 thiogalactoside acetyltransferase compare
ECD_00404 +0.5 2.2 acyl-CoA thioesterase 2 compare
ECD_01426 +0.5 1.7 nitrate reductase 2 (NRZ), alpha subunit compare
ECD_02219 +0.5 1.8 UPF0304 family protein compare
ECD_00575 +0.5 1.4 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding compare
ECD_00667 +0.5 0.6 DUF1722 family protein compare
ECD_00589 +0.5 2.3 sensory histidine kinase in two-component regulatory system with CitB compare
ECD_00471 +0.5 2.1 putative carbonate kinase compare
ECD_00742 +0.5 1.7 biotin synthase compare
ECD_01487 +0.5 1.5 phage N15 gp48-like protein compare
ECD_01034 +0.5 1.0 curli production assembly/transport outer membrane lipoprotein compare
ECD_02069 +0.5 1.3 tRNA-dihydrouridine synthase C compare
ECD_02129 +0.5 1.5 quinol dehydrogenase, electron source for NapAB compare
ECD_02397 +0.5 0.9 outer membrane integrity lipoprotein compare
ECD_01864 +0.5 1.3 universal stress protein compare
ECD_01755 +0.5 1.0 putative diguanylate cyclase compare
ECD_02308 +0.5 1.2 transcriptional regulator of yefH compare
ECD_00192 +0.5 1.5 putative lipoprotein compare
ECD_01427 +0.5 0.8 nitrate/nitrite transporter compare
ECD_00021 +0.5 1.2 putative usher protein compare
ECD_03581 +0.5 2.3 DUF937 family protein compare
ECD_02792 +0.5 0.9 oxidative damage protective factor for iron-sulfur proteins compare
ECD_00974 +0.5 1.9 Modulator of FtsH protease, inner membrane protein compare
ECD_04241 +0.5 2.8 DUF1212 family inner membrane protein compare
ECD_02563 +0.5 2.2 formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit compare
ECD_04384 +0.5 1.6 small predicted membrane protein compare
ECD_04150 +0.5 2.2 IS600 ORF1-like protein compare
ECD_02234 +0.5 1.8 histidine ABC transporter periplasmic binding protein compare
ECD_00843 +0.5 1.0 phage baseplate assembly protein compare
ECD_03697 +0.5 1.5 PRK11371 family inner membrane protein compare
ECD_04061 +0.5 1.6 L-ascorbate-specific enzyme IIB component of PTS compare
ECD_01627 +0.5 1.6 putative MFS transporter, inner membrane protein compare
ECD_02167 +0.5 1.8 anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit compare
ECD_03591 +0.5 1.2 tryptophanase leader peptide compare
ECD_00601 +0.5 2.3 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) compare
ECD_01828 +0.5 1.3 zinc ABC transporter periplasmic binding protein compare
ECD_02195 +0.5 1.5 RNase BN, tRNA processing enzyme compare
ECD_00533 +0.5 0.9 copper/silver efflux system, outer membrane component compare
ECD_01040 +0.5 1.2 curli assembly protein compare
ECD_02313 +0.4 1.8 sulfate transporter, sulfite inhibited compare
ECD_00048 +0.4 1.4 putative 4Fe-4S ferredoxin-type protein compare
ECD_00955 +0.4 1.0 paraquat-inducible, SoxRS-regulated MCE domain protein compare
ECD_00938 +0.4 0.9 aliphatic sulfonate ABC transporter permease compare
ECD_04226 +0.4 2.5 2-oxo-hept-3-ene-1,7-dioate hydratase compare
ECD_02026 +0.4 2.3 nucleoside transporter, low affinity compare
ECD_03927 +0.4 2.0 acid phosphatase/phosphotransferase, class B, non-specific compare
ECD_01610 +0.4 2.0 anhydro-N-acetylmuramic acid kinase compare
ECD_02073 +0.4 1.7 DUF218 superfamily vancomycin high temperature exclusion protein compare
ECD_01275 +0.4 1.7 gamma-glutamyl-gamma-aminobutyrate hydrolase compare
ECD_02963 +0.4 2.1 hexuronate regulon transcriptional repressor; autorepressor compare
ECD_03898 +0.4 1.0 extracellular polysaccharide production threonine-rich protein compare
ECD_01133 +0.4 2.0 23S rRNA pseudouridine(2457) synthase compare
ECD_03977 +0.4 1.9 phosphonate ABC transporter ATPase compare
ECD_04235 +0.4 1.5 L-galactonate oxidoreductase; L-gulonate oxidoreductase compare
ECD_01918 +0.4 1.4 LysR family putative transcriptional regulator compare
ECD_04245 +0.4 2.1 uncharacterized protein compare
ECD_00367 +0.4 1.5 2-carboxybenzaldehyde reductase compare
ECD_00454 +0.4 1.9 allD operon transcriptional activator compare
ECD_02285 +0.4 0.8 uncharacterized protein compare
ECD_04203 +0.4 1.5 putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase compare
ECD_01033 +0.4 1.1 DUF1097 family inner membrane protein compare
ECD_04185 +0.4 0.7 periplasmic chaperone compare
ECD_01200 +0.4 1.2 sensory histidine kinase in two-component regulatory system with NarL compare
ECD_02186 +0.4 2.0 inactive two-component system connector protein compare
ECD_03522 +0.4 1.9 Single-strand binding protein (SSB) (Helix-destabilizing protein) compare
ECD_00867 +0.4 1.0 arginine ABC transporter permease compare
ECD_03558 +0.4 1.7 putative Cys-type oxidative YidJ-maturating enzyme compare
ECD_02174 +0.4 1.2 putative DNA-binding transcriptional regulator for the rhm operon compare
ECD_02348 +0.4 0.9 ethanolamine utilization protein, putative carboxysome structural protein compare
ECD_01557 +0.4 1.4 S- and N-oxide reductase, A subunit, periplasmic compare
ECD_00616 +0.4 1.2 Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor compare
ECD_04055 +0.4 1.5 DUF1471 family periplasmic protein compare
ECD_00868 +0.4 1.2 arginine transporter subunit compare
ECD_01619 +0.4 1.1 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated compare
ECD_02100 +0.4 1.0 UPF0153 cysteine cluster protein compare
ECD_01692 +0.4 1.1 6-phosphofructokinase II compare
ECD_00977 +0.4 1.2 hydrogenase 1, b-type cytochrome subunit compare
ECD_01623 +0.4 1.2 putative ATP-dependent helicase compare
ECD_01077 +0.4 2.0 flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase compare
ECD_00930 +0.4 0.6 M15A protease-related family periplasmic protein compare
ECD_01793 +0.4 1.5 stress protein, member of the CspA-family compare
ECD_01404 +0.4 0.7 DUF606 family inner membrane protein compare
ECD_02061 +0.4 0.9 putative ABC transporter periplasmic binding protein compare
ECD_01606 +0.4 1.0 pyridoxamine kinase compare
ECD_01246 +0.4 1.4 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ECD_00487 +0.4 0.5 Excisionase compare
ECD_01727 +0.4 0.8 CDP-alcohol phosphatidyltransferase family inner membrane protein compare
ECD_03979 +0.4 1.8 zinc-ribbon family protein compare
ECD_00318 +0.4 2.0 taurine dioxygenase, 2-oxoglutarate-dependent compare
ECD_00741 +0.4 1.7 7,8-diaminopelargonic acid synthase, PLP-dependent compare
ECD_01301 +0.4 0.8 lipid hydroperoxide peroxidase compare
ECD_00967 +0.4 1.2 methylglyoxal synthase compare
ECD_04123 +0.4 0.7 DUF898 family inner membrane protein compare
ECD_02075 +0.4 1.1 dihydropyrimidine dehydrogenase, NADH-dependent, subunit N compare
ECD_02980 +0.4 2.1 putative reactive intermediate deaminase compare
ECD_01590 +0.4 1.5 maltose and glucose-specific PTS enzyme IIB component and IIC component compare
ECD_02099 +0.4 1.5 lactose/glucose efflux system compare
ECD_04103 +0.4 2.0 putative antibiotic peptide MccB17 maturation peptidase compare
ECD_02592 +0.4 3.1 activator of AmiC murein hydrolase activity, lipoprotein compare
ECD_00499 +0.4 0.9 DLP12 prophage; uncharacterized protein compare
ECD_02332 +0.4 1.6 RpoE-regulated lipoprotein compare
ECD_03303 +0.4 2.4 branched-chain amino acid ABC transporter ATPase compare
ECD_02618 +0.4 1.2 putative SDR family oxidoreductase compare
ECD_03760 +0.4 1.2 outer membrane porin L; putative sulfolipid porin compare
ECD_03774 +0.4 0.5 CopG family putative transcriptional regulator compare
ECD_00244 +0.4 1.2 PaoABC aldehyde oxidoreductase, FAD-containing subunit compare
ECD_04237 +0.4 2.1 putative DUF2501 family periplasmic protein compare
ECD_03143 +0.4 1.0 zntA gene transcriptional activator compare
ECD_01651 +0.4 0.7 SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein compare
ECD_02024 +0.4 1.2 D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit compare
ECD_01724 +0.4 1.4 putative ABC transporter permease compare
ECD_04182 +0.4 1.7 tyrosine recombinase/inversion of on/off regulator of fimA compare
ECD_03139 +0.4 1.7 16S rRNA m(5)C967 methyltransferase, SAM-dependent compare
ECD_01118 +0.4 1.0 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_00531 +0.4 1.4 copper-sensing histidine kinase in two-component regulatory system with CusR compare
ECD_04339 +0.4 1.2 stress-induced small enterobacterial protein compare
ECD_04137 +0.4 1.4 hypothetical protein compare
ECD_00607 +0.4 1.5 putative alpha-ribazole-5'-P phosphatase compare
ECD_01400 +0.4 0.9 putative ABC transporter permease compare


Specific Phenotypes

For 1 genes in this experiment

For phage MOI 10 in Escherichia coli BL21

For phage MOI 10 across organisms