Experiment set6S113 for Escherichia coli BL21

Compare to:

Bas27

200 most detrimental genes:

  gene name fitness t score description  
ECD_02694 +1.0 1.6 putative LuxR family transcriptional regulator compare
ECD_04048 +1.0 3.2 DUF2170 family protein compare
ECD_03541 +0.9 3.1 hypothetical protein compare
ECD_01773 +0.9 1.6 putative YeaWX dioxygenase beta subunit, reductase component compare
ECD_03425 +0.9 2.6 putative hydrogenase, 4Fe-4S ferredoxin-type component compare
ECD_00811 +0.9 3.2 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis compare
ECD_02351 +0.9 2.7 RmlC-like cupin domain protein compare
ECD_01561 +0.8 2.1 H(+)/Cl(-) exchange transporter compare
ECD_01928 +0.8 1.9 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase compare
ECD_02130 +0.8 2.5 nitrate reductase, small, cytochrome C550 subunit, periplasmic compare
ECD_01577 +0.8 2.0 response regulator of RstAB two-component system compare
ECD_01379 +0.7 2.2 putative DNA-binding transcriptional regulator compare
ECD_01651 +0.7 2.1 SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein compare
ECD_02348 +0.7 1.7 ethanolamine utilization protein, putative carboxysome structural protein compare
ECD_04018 +0.7 1.5 entericidin A membrane lipoprotein, antidote entericidin B compare
ECD_04062 +0.7 2.3 L-ascorbate-specific enzyme IIA component of PTS compare
ECD_01014 +0.7 2.1 ureidoacrylate amidohydrolase compare
ECD_01255 +0.7 2.6 phosphatidylglycerophosphatase B compare
ECD_02333 +0.7 2.1 inner membrane protein compare
ECD_02177 +0.7 1.7 nucleoside triphosphatase compare
ECD_02346 +0.6 1.4 aldehyde oxidoreductase, ethanolamine utilization protein compare
ECD_02476 +0.6 2.9 thioredoxin 2 compare
ECD_01042 +0.6 1.7 O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit compare
ECD_00338 +0.6 2.5 UPF0345 family protein compare
ECD_00374 +0.6 1.2 phage Phi6 host factor, ATP/GTP binding protein compare
ECD_04185 +0.6 1.6 periplasmic chaperone compare
ECD_02584 +0.6 2.0 serine/threonine-specific protein phosphatase 2 compare
ECD_02774 +0.6 1.6 Zn-dependent metalloprotease-related protein compare
ECD_00480 +0.6 1.7 FimA-like protein compare
ECD_02036 +0.6 1.2 hypothetical protein compare
ECD_01435 +0.6 1.4 putative DNA-binding transcriptional regulator compare
ECD_02031 +0.6 2.1 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase compare
ECD_02278 +0.6 1.6 multidrug resistance efflux pump membrane fusion protein compare
ECD_01067 +0.6 1.5 anti-sigma factor for FliA (sigma 28) compare
ECD_03207 +0.6 1.3 OsmC family protein compare
ECD_04392 +0.6 2.4 uncharacterized protein compare
ECD_01573 +0.6 2.9 DUF1471 family periplasmic protein compare
ECD_03623 +0.6 1.6 ATP synthase, membrane-bound accessory factor compare
ECD_01248 +0.6 1.4 inner membrane protein, S49 peptidase family protein compare
ECD_04261 +0.6 3.1 hypothetical protein compare
ECD_00569 +0.6 2.3 Spo0J family protein, ParB-like nuclease domain compare
ECD_00791 +0.5 1.2 putative pyruvate formate lyase activating enzyme compare
ECD_02024 +0.5 2.5 D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit compare
ECD_00376 +0.5 2.6 hypothetical protein compare
ECD_00506 +0.5 1.9 DLP12 prophage; putative phage lysis protein compare
ECD_01167 +0.5 1.0 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A compare
ECD_00509 +0.5 1.8 DLP12 prophage; putative lipoprotein compare
ECD_01452 +0.5 1.6 putative periplasmic M16 family zinc metalloendopeptidase compare
ECD_01589 +0.5 1.2 transcriptional repressor of Mal regulon compare
ECD_04049 +0.5 1.1 PspA/IM30 family protein compare
ECD_02052 +0.5 2.2 lipoprotein, DUF1307 family compare
ECD_02397 +0.5 1.7 outer membrane integrity lipoprotein compare
ECD_02126 +0.5 2.5 heme export ABC transporter permease; CcmE-interacting protein compare
ECD_00850 +0.5 1.8 putative regulator of late gene expression compare
ECD_01118 +0.5 1.9 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_04303 +0.5 0.9 KGG family protein compare
ECD_03999 +0.5 1.1 antitoxin of GhoTS toxin-antitoxin pair; endonuclease for ghoT mRNA compare
ECD_00136 +0.5 1.5 putative fimbrial-like adhesin protein compare
ECD_02384 +0.5 1.4 putative formate transporter compare
ECD_01253 +0.5 1.3 aconitate hydratase 1; aconitase A compare
ECD_01897 +0.5 1.0 ssuEADCB/tauABCD operon transcriptional activator compare
ECD_01828 +0.5 1.4 zinc ABC transporter periplasmic binding protein compare
ECD_01801 +0.5 3.8 carboxy-terminal protease for penicillin-binding protein 3 compare
ECD_01599 +0.5 1.2 SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex compare
ECD_01727 +0.5 1.1 CDP-alcohol phosphatidyltransferase family inner membrane protein compare
ECD_01700 +0.5 0.8 cell division modulator compare
ECD_02242 +0.5 1.5 DedA family inner membrane protein compare
ECD_01572 +0.5 1.8 pyridine nucleotide transhydrogenase, alpha subunit compare
ECD_01866 +0.5 1.4 trehalose-6-phosphate phosphatase, biosynthetic compare
ECD_03021 +0.5 0.9 UPF0306 family protein compare
ECD_02058 +0.5 1.1 putative ABC transporter permease compare
ECD_03456 +0.5 1.8 mannitol operon repressor compare
ECD_03338 +0.5 1.9 DUF4049 family protein compare
ECD_01863 +0.5 1.0 flagellar class II regulon transcriptional activator, with FlhC compare
ECD_04050 +0.5 1.8 DUF2491 family protein compare
ECD_03353 +0.5 1.5 hypothetical protein compare
ECD_02256 +0.5 1.3 putative DNA endonuclease compare
ECD_01896 +0.4 0.8 putative multdrug exporter, MATE family compare
ECD_00904 +0.4 0.7 LysR family putative transcriptional regulator compare
ECD_01657 +0.4 1.5 UPF0118 family inner membrane protein compare
ECD_02732 +0.4 1.0 UPF0267 family protein compare
ECD_00040 +0.4 1.9 carnitinyl-CoA dehydratase compare
ECD_00655 +0.4 1.7 potassium translocating ATPase, subunit A compare
ECD_02124 +0.4 1.6 periplasmic heme chaperone compare
ECD_00813 +0.4 0.8 transcriptional regulator of csgD and ybiJI; autoregulator compare
ECD_00585 +0.4 0.8 citrate lyase, acyl carrier (gamma) subunit compare
ECD_00757 +0.4 1.8 endo/exonuclease/phosphatase family protein compare
ECD_04240 +0.4 1.7 DUF3815 family inner membrane protein compare
ECD_03350 +0.4 0.8 arsenical resistance operon transcriptional repressor; autorepressor compare
ECD_00082 +0.4 0.8 RsmH methytransferase inhibitor compare
ECD_01168 +0.4 0.6 lytic murein endotransglycosylase E compare
ECD_00944 +0.4 2.4 putative outer membrane fimbrial subunit export usher protein compare
ECD_01694 +0.4 1.4 fructosamine kinase family protein compare
ECD_00859 +0.4 1.1 putrescine ABC transporter periplasmic binding protein compare
ECD_04231 +0.4 2.1 Homoprotocatechuate degradative operon repressor compare
ECD_03096 +0.4 1.6 malate dehydrogenase, NAD(P)-binding compare
ECD_01795 +0.4 1.8 putative inner membrane protein compare
ECD_03867 +0.4 1.8 thiamine biosynthesis ThiGH complex subunit compare
ECD_02853 +0.4 1.9 hypothetical protein compare
ECD_02416 +0.4 0.9 Fe(2+) donor and activity modulator for cysteine desulfurase compare
ECD_00857 +0.4 1.3 ribosomal protein S6 modification protein compare
ECD_01365 +0.4 0.9 putative esterase compare
ECD_01479 +0.4 0.8 putative membrane-bound diguanylate cyclase compare
ECD_00752 +0.4 1.1 molybdopterin synthase, large subunit compare
ECD_01861 +0.4 1.1 proton conductor component of flagella motor compare
ECD_01409 +0.4 1.4 ATP-binding protein, periplasmic, function unknown compare
ECD_01137 +0.4 0.8 repressor of blue light-responsive genes compare
ECD_04203 +0.4 1.8 putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase compare
ECD_01396 +0.4 1.1 putative DNA-binding transcriptional regulator and putative aminotransferase compare
ECD_01760 +0.4 1.6 putative MFS transporter, inner membrane protein compare
ECD_01301 +0.4 0.7 lipid hydroperoxide peroxidase compare
ECD_00310 +0.4 1.7 alcohol dehydrogenase class III; glutathione-dependent formaldehyde dehydrogenase compare
ECD_04194 +0.4 1.3 uncharacterized protein compare
ECD_00864 +0.4 1.5 23S rRNA m(5)U747 methyltransferase, SAM-dependent compare
ECD_01889 +0.4 1.4 cytochrome b561-like protein compare
ECD_00795 +0.4 1.8 Isoaspartyl peptidase compare
ECD_00484 +0.4 1.4 FimA-like protein compare
ECD_01021 +0.4 1.8 deferrrochelatase, periplasmic compare
ECD_00329 +0.4 0.8 anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein compare
ECD_03956 +0.4 2.2 D-allose kinase compare
ECD_00870 +0.4 1.0 lipoprotein compare
ECD_01247 +0.4 1.1 putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase compare
ECD_04198 +0.4 1.8 SpmB family inner membrane protein compare
ECD_00951 +0.4 1.8 6-N-hydroxylaminopurine detoxification oxidoreductase compare
ECD_02900 +0.4 2.0 NADPH quinone reductase compare
ECD_01926 +0.4 1.5 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase compare
ECD_03359 +0.4 1.5 acid-resistance membrane protein compare
ECD_03944 +0.4 1.5 formate-dependent nitrite reductase, 4Fe4S subunit compare
ECD_02525 +0.4 0.8 DNA binding protein, nucleoid-associated compare
ECD_01772 +0.4 1.6 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster compare
ECD_01366 +0.4 1.5 putative phosphatase inner membrane protein compare
ECD_00978 +0.4 0.9 hydrogenase 1 maturation protease compare
ECD_01022 +0.4 1.3 ATP-binding protein; putative PhoH family P-loop ATPase compare
ECD_01691 +0.4 0.7 acid-inducible putative outer membrane protein compare
ECD_03479 +0.4 1.5 Lipid A-core, surface polymer ligase compare
ECD_00810 +0.4 1.7 uncharacterized protein compare
ECD_02192 +0.4 1.5 isochorismate synthase 2 compare
ECD_01815 +0.4 1.7 exodeoxyribonuclease 10; DNA exonuclease X compare
ECD_02995 +0.4 1.2 toxin of the SohB(PrlF)-YhaV toxin-antitoxin system compare
ECD_04078 +0.4 1.9 OapA family protein compare
ECD_02825 +0.3 0.9 Pyrophosphorylase compare
ECD_02191 +0.3 1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase compare
ECD_01048 +0.3 1.0 multicopy suppressor of secY and secA compare
ECD_01865 +0.3 1.4 trehalose-6-phosphate synthase compare
ECD_02280 +0.3 0.8 hybrid sensory histidine kinase in two-component regulatory system with EvgA compare
ECD_01349 +0.3 1.3 pyruvate-flavodoxin oxidoreductase compare
ECD_01601 +0.3 0.7 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex compare
ECD_04122 +0.3 1.9 GNAT family putative N-acetyltransferase compare
ECD_02398 +0.3 0.9 nalidixic acid resistance protein, putative periplasmic protein compare
ECD_01225 +0.3 0.7 putative DGPF domain-containing enzyme compare
ECD_01427 +0.3 0.8 nitrate/nitrite transporter compare
ECD_04142 +0.3 1.3 GFO/IDH/MOCA family putative oxidoreductase NAD(P)-dependent compare
ECD_04342 +0.3 1.7 hypothetical protein compare
ECD_00995 +0.3 1.7 putative 4Fe-4S membrane protein compare
ECD_00405 +0.3 1.4 outer membrane lipoprotein compare
ECD_00971 +0.3 2.0 23S rRNA m(5)C1962 methyltransferase, SAM-dependent compare
ECD_00950 +0.3 0.8 FtsZ stabilizer compare
ECD_02332 +0.3 1.5 RpoE-regulated lipoprotein compare
ECD_03920 +0.3 1.1 uncharacterized protein compare
ECD_01218 +0.3 1.3 oligopeptide ABC transporter permease compare
ECD_02056 +0.3 1.2 transcriptional activator of csgD and csgBA compare
ECD_03017 +0.3 0.6 outer membrane lipoprotein compare
ECD_00334 +0.3 1.6 UPF0178 family protein compare
ECD_02833 +0.3 1.2 putative type II secretion protein GspI compare
ECD_00843 +0.3 0.8 phage baseplate assembly protein compare
ECD_02064 +0.3 1.3 D-alanyl-D-alanine endopeptidase compare
ECD_04141 +0.3 1.4 putative MFS transporter, membrane protein compare
ECD_00623 +0.3 1.7 glutamate/aspartate periplasmic binding protein compare
ECD_01305 +0.3 0.6 S9-like protein non-peptidase family protein compare
ECD_02034 +0.3 0.9 hypothetical protein compare
ECD_02238 +0.3 0.8 colicin V production protein compare
ECD_01843 +0.3 1.7 trimethylamine N-oxide reductase system III, catalytic subunit compare
ECD_01960 +0.3 0.9 putative acyl transferase compare
ECD_00231 +0.3 1.3 peptide chain release factor 2 compare
ECD_01668 +0.3 1.0 putative oxidoreductase compare
ECD_00567 +0.3 1.9 putative oxidoreductase compare
ECD_00283 +0.3 1.2 amino acid exporter for proline, lysine, glutamate, homoserine compare
ECD_02909 +0.3 1.1 DUF1190 family protein compare
ECD_03004 +0.3 1.5 tagatose 6-phosphate aldolase 1, kbaY subunit compare
ECD_00830 +0.3 1.4 hypothetical protein compare
ECD_00118 +0.3 1.4 UPF0231 family protein compare
ECD_00454 +0.3 1.6 allD operon transcriptional activator compare
ECD_00137 +0.3 1.4 putative fimbrial-like adhesin protein compare
ECD_02035 +0.3 1.1 hypothetical protein compare
ECD_03654 +0.3 1.4 hypothetical protein compare
ECD_00558 +0.3 1.5 enterobactin exporter, iron-regulated compare
ECD_03412 +0.3 1.1 uncharacterized protein compare
ECD_01784 +0.3 1.2 L-serine dehydratase 1 compare
ECD_03758 +0.3 1.8 putative sugar phosphate isomerase compare
ECD_01814 +0.3 0.6 C-N hydrolase family protein compare
ECD_00245 +0.3 1.4 PaoABC aldehyde oxidoreductase, 2Fe-2S subunit compare
ECD_00269 +0.3 1.3 choline-inducible betIBA-betT divergent operon transcriptional repressor compare
ECD_01907 +0.3 1.3 hypothetical protein compare
ECD_01763 +0.3 0.6 diguanylate cyclase compare
ECD_00495 +0.3 1.4 inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein compare
ECD_02018 +0.3 1.7 galactitol-specific enzyme IIC component of PTS compare
ECD_01829 +0.3 1.5 zinc ABC transporter ATPase compare
ECD_01375 +0.3 0.8 putative periplasmic protein compare
ECD_01894 +0.3 1.1 AMP nucleosidase compare
ECD_00274 +0.3 1.0 ankyrin repeat protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms