Experiment set6IT092 for Pseudomonas simiae WCS417

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
PS417_18595 -6.6 -4.6 3-isopropylmalate dehydratase compare
PS417_01855 -6.6 -4.2 phosphoribosyl-AMP cyclohydrolase compare
PS417_23805 -6.4 -4.4 acetolactate synthase 3 regulatory subunit compare
PS417_18560 -6.4 -10.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_18585 -5.8 -5.6 3-isopropylmalate dehydrogenase compare
PS417_23800 -5.7 -10.2 ketol-acid reductoisomerase compare
PS417_27040 -5.5 -3.5 3-phosphoglycerate dehydrogenase compare
PS417_25720 -5.5 -9.8 anthranilate synthase component II compare
PS417_01565 -5.4 -6.9 imidazole glycerol phosphate synthase compare
PS417_20125 -5.3 -4.9 phosphoribosylglycinamide formyltransferase compare
PS417_16465 -5.1 -10.3 sirohydrochlorin ferrochelatase compare
PS417_12290 -5.1 -9.6 sulfite reductase compare
PS417_26745 -5.0 -5.8 methionine biosynthesis protein MetW compare
PS417_02005 -5.0 -11.1 glutamate synthase compare
PS417_04415 -5.0 -8.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_18600 -4.9 -5.1 isopropylmalate isomerase compare
PS417_25725 -4.8 -17.2 anthranilate synthase component I compare
PS417_04420 -4.8 -11.4 histidinol dehydrogenase compare
PS417_22690 -4.7 -4.5 phosphogluconate dehydratase compare
PS417_26740 -4.7 -11.3 homoserine acetyltransferase compare
PS417_01575 -4.6 -7.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_00185 -4.6 -4.4 tryptophan synthase subunit beta compare
PS417_23810 -4.6 -14.0 acetolactate synthase 3 catalytic subunit compare
PS417_28220 -4.4 -4.2 LysR family transcriptional regulator compare
PS417_12855 -4.4 -5.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_02510 -4.4 -7.2 ATP phosphoribosyltransferase regulatory subunit compare
PS417_27835 -4.3 -5.7 endoribonuclease compare
PS417_02000 -4.2 -11.9 glutamate synthase compare
PS417_27795 -4.1 -1.7 orotate phosphoribosyltransferase compare
PS417_24745 -4.0 -3.9 gamma-glutamyl phosphate reductase compare
PS417_06375 -4.0 -1.6 deoxycytidine triphosphate deaminase compare
PS417_05595 -3.9 -10.4 ornithine carbamoyltransferase compare
PS417_08125 -3.9 -1.6 prephenate dehydratase compare
PS417_25715 -3.9 -6.4 anthranilate phosphoribosyltransferase compare
PS417_18530 -3.7 -4.5 O-succinylhomoserine sulfhydrylase compare
PS417_01850 -3.7 -8.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23545 -3.6 -3.2 gamma-glutamyl kinase compare
PS417_26995 -3.6 -11.3 phosphoserine phosphatase compare
PS417_23110 -3.6 -7.2 2-isopropylmalate synthase compare
PS417_27195 -3.4 -1.9 N-acetylglutamate synthase compare
PS417_23995 -3.1 -1.8 preprotein translocase subunit SecG compare
PS417_25710 -3.1 -1.8 indole-3-glycerol-phosphate synthase compare
PS417_01580 -3.1 -1.5 imidazole glycerol phosphate synthase compare
PS417_01570 -3.1 -1.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_01605 -3.0 -2.9 phosphoglycerate mutase compare
PS417_18690 -2.9 -5.5 aromatic amino acid aminotransferase compare
PS417_26890 -2.8 -4.4 dihydroxy-acid dehydratase compare
PS417_23770 -2.8 -3.2 exodeoxyribonuclease V subunit alpha compare
PS417_26730 -2.8 -1.6 pyrroline-5-carboxylate reductase compare
PS417_20985 -2.7 -3.6 porin compare
PS417_01560 -2.3 -3.8 imidazoleglycerol-phosphate dehydratase compare
PS417_02415 -2.3 -5.5 phosphoserine phosphatase compare
PS417_22620 -2.2 -5.2 pyruvate kinase compare
PS417_20160 -2.2 -3.2 cysteine synthase compare
PS417_26695 -2.2 -1.8 uracil phosphoribosyltransferase compare
PS417_00180 -2.1 -2.2 tryptophan synthase subunit alpha compare
PS417_21125 -2.1 -7.8 phosphoadenosine phosphosulfate reductase compare
PS417_07170 -2.0 -5.2 hypothetical protein compare
PS417_08155 -1.9 -2.4 integration host factor subunit beta compare
PS417_21655 -1.8 -1.8 aspartate kinase compare
PS417_18590 -1.7 -2.2 SAM-dependent methyltransferase compare
PS417_22990 -1.7 -2.0 iron dicitrate transport regulator FecR compare
PS417_21705 -1.7 -4.6 arginine N-succinyltransferase compare
PS417_23915 -1.7 -6.1 pantoate--beta-alanine ligase compare
PS417_05160 -1.7 -1.6 DNA polymerase III subunit chi compare
PS417_24155 -1.6 -2.3 ATP-binding protein compare
PS417_23900 -1.6 -8.9 poly(A) polymerase compare
PS417_16490 -1.5 -2.5 cell division protein FtsK compare
PS417_13510 -1.5 -1.4 polyketide cyclase compare
PS417_13075 -1.5 -2.0 hypothetical protein compare
PS417_03260 -1.5 -2.1 5S ribosomal RNA compare
PS417_21980 -1.3 -6.3 permease DsdX compare
PS417_02555 -1.3 -8.9 exoribonuclease R compare
PS417_05455 -1.3 -5.4 XRE family transcriptional regulator compare
PS417_21700 -1.3 -4.1 arginine N-succinyltransferase compare
PS417_01735 -1.2 -3.6 ABC transporter permease compare
PS417_06645 -1.2 -7.0 RNA polymerase-associated protein RapA compare
PS417_03560 -1.2 -1.5 GTP-binding protein compare
PS417_24500 -1.2 -3.8 DEAD/DEAH box helicase compare
PS417_21430 -1.2 -2.5 3-oxoacyl-ACP synthase compare
PS417_06680 -1.1 -6.0 nuclease PIN compare
PS417_01030 -1.1 -1.6 glutamine ABC transporter substrate-binding protein compare
PS417_06675 -1.1 -2.6 ATP-dependent helicase compare
PS417_19285 -1.1 -2.1 ankyrin compare
PS417_16735 -1.1 -4.0 aldehyde dehydrogenase compare
PS417_27800 -1.1 -4.5 exodeoxyribonuclease III compare
PS417_13445 -1.1 -2.1 D-aminopeptidase compare
PS417_20635 -1.1 -1.1 ABC transporter ATP-binding protein compare
PS417_26985 -1.1 -3.1 phosphoenolpyruvate-protein phosphotransferase compare
PS417_26240 -1.1 -1.6 N-methylproline demethylase compare
PS417_27870 -1.1 -2.8 ATP-dependent DNA helicase RecG compare
PS417_09470 -1.1 -1.3 hypothetical protein compare
PS417_01715 -1.0 -1.3 hypothetical protein compare
PS417_24370 -1.0 -0.8 (2Fe-2S)-binding protein compare
PS417_05815 -1.0 -3.0 recombinase RecA compare
PS417_07165 -1.0 -2.4 dihydrodipicolinate synthase compare
PS417_21625 -1.0 -0.9 DNA-binding protein compare
PS417_06735 -0.9 -1.7 3-oxoadipate enol-lactonase compare
PS417_04365 -0.9 -0.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_21690 -0.9 -3.3 N-succinylarginine dihydrolase compare
PS417_26120 -0.9 -1.8 hypothetical protein compare
PS417_12555 -0.9 -4.6 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) compare
PS417_23505 -0.9 -1.9 cell division protein DedD compare
PS417_07455 -0.9 -1.4 glutamine amidotransferase compare
PS417_15975 -0.9 -1.3 glutamate carboxypeptidase compare
PS417_23380 -0.9 -2.0 cytochrome o ubiquinol oxidase subunit III compare
PS417_14755 -0.9 -1.8 UV damage repair endonuclease UvdE compare
PS417_28230 -0.9 -1.7 transcriptional regulator compare
PS417_23475 -0.9 -1.2 hypothetical protein compare
PS417_28080 -0.9 -6.3 phosphate ABC transporter permease compare
PS417_05570 -0.9 -2.8 DeoR faimly transcriptional regulator compare
PS417_02950 -0.9 -2.3 tRNA-dihydrouridine synthase B compare
PS417_27435 -0.9 -3.6 polyphosphate kinase compare
PS417_23775 -0.9 -1.5 exodeoxyribonuclease V subunit beta compare
PS417_12160 -0.9 -2.4 Fis family transcriptional regulator compare
PS417_28070 -0.8 -3.7 phosphate ABC transporter ATP-binding protein compare
PS417_19605 -0.8 -1.3 hypothetical protein compare
PS417_08740 -0.8 -1.5 ribose-phosphate pyrophosphokinase compare
PS417_18360 -0.8 -1.7 hypothetical protein compare
PS417_08225 -0.8 -2.6 acetolactate synthase compare
PS417_26850 -0.8 -0.7 twin-arginine translocation pathway signal protein compare
PS417_13490 -0.8 -1.5 hypothetical protein compare
PS417_22695 -0.8 -3.8 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_10715 -0.8 -1.8 Cro/Cl family transcriptional regulator compare
PS417_22445 -0.8 -2.5 ATP-dependent DNA helicase RuvB compare
PS417_22685 -0.8 -4.6 Glucokinase (EC 2.7.1.2) (from data) compare
PS417_00975 -0.8 -1.3 hypothetical protein compare
PS417_16560 -0.8 -1.6 GNAT family acetyltransferase compare
PS417_04585 -0.8 -1.1 hypothetical protein compare
PS417_07140 -0.8 -2.4 peptidase M48 compare
PS417_04410 -0.8 -1.4 hypothetical protein compare
PS417_15660 -0.7 -2.1 hemerythrin compare
PS417_09150 -0.7 -1.6 energy transducer TonB compare
PS417_27010 -0.7 -4.0 threonine dehydratase compare
PS417_08135 -0.7 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_08580 -0.7 -2.9 histidine kinase compare
PS417_26295 -0.7 -2.0 gamma-butyrobetaine dioxygenase compare
PS417_15510 -0.7 -1.0 hypothetical protein compare
PS417_10320 -0.7 -1.9 hypothetical protein compare
PS417_27300 -0.7 -0.8 cell division protein ZapA compare
PS417_15225 -0.7 -2.2 alpha/beta hydrolase compare
PS417_20665 -0.7 -4.1 hypothetical protein compare
PS417_13055 -0.7 -1.0 aminotransferase compare
PS417_16350 -0.7 -2.3 competence protein ComEC compare
PS417_22615 -0.7 -2.5 hypothetical protein compare
PS417_06945 -0.7 -0.9 membrane protein compare
PS417_27705 -0.7 -1.3 amino acid dehydrogenase compare
PS417_07885 -0.7 -3.7 hypothetical protein compare
PS417_14255 -0.7 -2.4 phosphate import ATP-binding protein PstB compare
PS417_27665 -0.7 -2.5 diguanylate cyclase compare
PS417_21065 -0.7 -1.9 3-methylitaconate isomerase compare
PS417_06600 -0.7 -0.6 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_02815 -0.7 -3.2 urea ABC transporter ATP-binding protein compare
PS417_23620 -0.7 -3.1 epimerase compare
PS417_04535 -0.7 -2.7 lysine transporter LysE compare
PS417_14140 -0.7 -1.6 membrane protein compare
PS417_05235 -0.7 -1.4 peptidase inhibitor I42 compare
PS417_10425 -0.7 -1.3 hypothetical protein compare
PS417_09865 -0.7 -1.5 hypothetical protein compare
PS417_04270 -0.7 -3.5 ribonuclease G compare
PS417_09010 -0.7 -1.3 phosphohistidine phosphatase compare
PS417_17035 -0.7 -1.0 Cro/Cl family transcriptional regulator compare
PS417_12390 -0.7 -1.4 hypothetical protein compare
PS417_22340 -0.6 -2.2 carbamate kinase compare
PS417_25635 -0.6 -2.4 biotin--protein ligase compare
PS417_15875 -0.6 -1.0 LuxR family transcriptional regulator compare
PS417_08435 -0.6 -0.9 pilus assembly protein PilZ compare
PS417_24125 -0.6 -2.1 hypothetical protein compare
PS417_02150 -0.6 -3.8 potassium/proton antiporter compare
PS417_18300 -0.6 -1.7 transcriptional regulator compare
PS417_07890 -0.6 -2.1 hypothetical protein compare
PS417_01710 -0.6 -2.2 histidine utilization repressor compare
PS417_14940 -0.6 -1.2 LysR family transcriptional regulator compare
PS417_21380 -0.6 -2.1 GntR family transcriptional regulator compare
PS417_28050 -0.6 -2.7 hypothetical protein compare
PS417_03380 -0.6 -0.9 hypothetical protein compare
PS417_07270 -0.6 -2.0 LysR family transcriptional regulator compare
PS417_27290 -0.6 -1.2 hypothetical protein compare
PS417_08990 -0.6 -2.1 ABC transporter substrate-binding protein compare
PS417_01630 -0.6 -1.1 hypothetical protein compare
PS417_01950 -0.6 -2.2 malate dehydrogenase compare
PS417_06685 -0.6 -0.7 beta-ketoadipyl CoA thiolase compare
PS417_27605 -0.6 -2.1 hypothetical protein compare
PS417_06400 -0.6 -1.8 succinylglutamate desuccinylase compare
PS417_26755 -0.6 -0.7 nucleoside-triphosphate diphosphatase compare
PS417_21510 -0.6 -0.9 histidine kinase compare
PS417_24575 -0.6 -0.8 hypothetical protein compare
PS417_11015 -0.6 -1.5 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) compare
PS417_20340 -0.6 -1.0 hypothetical protein compare
PS417_05035 -0.6 -2.6 hypothetical protein compare
PS417_16750 -0.6 -1.6 ABC transporter ATP-binding protein compare
PS417_15480 -0.6 -1.4 ABC transporter substrate-binding protein compare
PS417_13170 -0.6 -2.8 multidrug DMT transporter permease compare
PS417_10985 -0.6 -0.7 NADH:flavin oxidoreductase compare
PS417_10810 -0.6 -1.3 hypothetical protein compare
PS417_25985 -0.6 -1.1 dethiobiotin synthetase compare
PS417_07990 -0.6 -1.9 endoribonuclease L-PSP compare
PS417_10095 -0.6 -0.8 hypothetical protein compare
PS417_22140 -0.6 -3.4 glucose/xylose ABC transporter, permease component 2 (from data) compare
PS417_08150 -0.6 -1.9 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Glucose in Pseudomonas simiae WCS417

For carbon source D-Glucose across organisms