| | gene | name | fitness | t score | description | |
|---|
| b3183 | obgE | -5.1 | -1.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0500 | ybbD | -5.1 | -2.3 | hypothetical protein (RefSeq) | compare |
| b2330 | yfcB | -4.9 | -2.2 | putative adenine-specific methylase (VIMSS) | compare |
| b3121 | yhaC | -4.3 | -2.0 | hypothetical protein (NCBI) | compare |
| b2620 | smpB | -4.1 | -2.3 | SsrA-binding protein (NCBI) | compare |
| b3979 | thrT | -4.0 | -1.0 | tRNA-Thr (NCBI) | compare |
| b3483 | yhhH | -4.0 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4172 | hfq | -3.8 | -2.6 | RNA-binding protein Hfq (NCBI) | compare |
| b2935 | tktA | -3.7 | -6.3 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3463 | ftsE | -3.7 | -8.5 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4375 | prfC | -3.7 | -11.1 | peptide chain release factor 3 (NCBI) | compare |
| b2830 | nudH | -3.6 | -2.7 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3442 | yhhZ | -3.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b0200 | gmhB | -3.5 | -3.4 | hypothetical protein (NCBI) | compare |
| b3169 | nusA | -3.5 | -3.8 | transcription elongation factor NusA (NCBI) | compare |
| b2894 | xerD | -3.5 | -2.2 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3725 | pstB | -3.4 | -5.4 | phosphate transporter subunit (NCBI) | compare |
| b1058 | yceO | -3.4 | -1.4 | hypothetical protein (NCBI) | compare |
| b2820 | recB | -3.3 | -5.2 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0738 | tolR | -3.3 | -4.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3863 | polA | -3.2 | -2.1 | DNA polymerase I (NCBI) | compare |
| b0014 | dnaK | -3.1 | -2.2 | molecular chaperone DnaK (NCBI) | compare |
| b0303 | ykgI | -3.1 | -3.8 | orf, hypothetical protein (VIMSS) | compare |
| b3386 | rpe | -3.0 | -3.8 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3504 | yhiS | -2.9 | -3.8 | hypothetical protein (RefSeq) | compare |
| b1236 | galU | -2.8 | -6.8 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2110 | yehC | -2.8 | -2.8 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3027 | ygiZ | -2.8 | -2.8 | conserved inner membrane protein (NCBI) | compare |
| b2567 | rnc | -2.7 | -2.0 | ribonuclease III (NCBI) | compare |
| b2650 | ypjC | -2.7 | -1.0 | hypothetical protein (RefSeq) | compare |
| b3811 | xerC | -2.6 | -4.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3778 | rep | -2.6 | -11.2 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3462 | ftsX | -2.6 | -7.6 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0890 | ftsK | -2.5 | -10.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3621 | rfaC | -2.5 | -8.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3792 | wzxE | -2.4 | -7.4 | O-antigen translocase (NCBI) | compare |
| b0949 | uup | -2.4 | -8.0 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2168 | fruK | -2.4 | -1.9 | 1-phosphofructokinase (NCBI) | compare |
| b2847 | yqeI | -2.3 | -6.6 | predicted transcriptional regulator (NCBI) | compare |
| b4042 | dgkA | -2.3 | -3.5 | diacylglycerol kinase (NCBI) | compare |
| b1545 | pinQ | -2.3 | -1.1 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b3630 | rfaP | -2.3 | -13.0 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0683 | fur | -2.3 | -1.6 | ferric uptake regulator (NCBI) | compare |
| b0118 | acnB | -2.3 | -4.5 | aconitate hydratase (NCBI) | compare |
| b2699 | recA | -2.3 | -2.7 | recombinase A (NCBI) | compare |
| b0439 | lon | -2.3 | -6.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4557 | yidD | -2.3 | -3.0 | hypothetical protein (NCBI) | compare |
| b3390 | aroK | -2.3 | -2.2 | shikimate kinase I (NCBI) | compare |
| b0726 | sucA | -2.2 | -3.8 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1347 | ydaC | -2.2 | -1.8 | Rac prophage; predicted protein (NCBI) | compare |
| b4177 | purA | -2.2 | -5.4 | adenylosuccinate synthetase (NCBI) | compare |
| b4279 | yjhB | -2.2 | -3.2 | putative transport protein (VIMSS) | compare |
| b4410 | ecnA | -2.2 | -0.8 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b3842 | rfaH | -2.2 | -5.0 | transcriptional activator RfaH (NCBI) | compare |
| b0603 | ybdO | -2.1 | -3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4497 | yeeL | -2.1 | -4.4 | no description | compare |
| b1505 | ydeT | -2.1 | -4.0 | hypothetical protein (RefSeq) | compare |
| b3631 | rfaG | -2.1 | -14.2 | glucosyltransferase I (NCBI) | compare |
| b0222 | lpcA | -2.1 | -3.3 | phosphoheptose isomerase (NCBI) | compare |
| b4592 | yccB | -2.1 | -1.5 | hypothetical protein (RefSeq) | compare |
| b4704 | arrS | -2.1 | -1.3 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b1961 | dcm | -2.0 | -1.3 | DNA cytosine methylase (NCBI) | compare |
| b2939 | yqgB | -2.0 | -1.4 | predicted protein (RefSeq) | compare |
| b4402 | yjjY | -2.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b1850 | eda | -2.0 | -2.3 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3620 | rfaF | -2.0 | -5.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2576 | srmB | -2.0 | -3.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b1231 | tyrT | -2.0 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b2853 | ygeI | -1.9 | -2.6 | hypothetical protein (NCBI) | compare |
| b3916 | pfkA | -1.9 | -4.9 | 6-phosphofructokinase (NCBI) | compare |
| b3026 | qseC | -1.9 | -5.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1499 | ydeO | -1.9 | -2.4 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1831 | proQ | -1.9 | -4.1 | putative solute/DNA competence effector (NCBI) | compare |
| b4239 | treC | -1.9 | -6.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b3052 | rfaE | -1.9 | -4.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1861 | ruvA | -1.9 | -1.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3609 | secB | -1.9 | -1.7 | export protein SecB (NCBI) | compare |
| b1434 | ydcN | -1.8 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2569 | lepA | -1.8 | -4.6 | GTP-binding protein LepA (NCBI) | compare |
| b2288 | nuoA | -1.8 | -2.6 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2501 | ppk | -1.8 | -8.4 | polyphosphate kinase (NCBI) | compare |
| b0740 | tolB | -1.8 | -4.2 | translocation protein TolB precursor (NCBI) | compare |
| b2822 | recC | -1.8 | -4.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2947 | gshB | -1.8 | -4.2 | glutathione synthetase (NCBI) | compare |
| b3619 | rfaD | -1.8 | -3.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3933 | ftsN | -1.8 | -8.7 | essential cell division protein (NCBI) | compare |
| b0688 | pgm | -1.8 | -3.4 | phosphoglucomutase (NCBI) | compare |
| b0722 | sdhD | -1.8 | -3.3 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b4414 | tff | -1.8 | -2.3 | unknown RNA (NCBI) | compare |
| b4345 | mcrC | -1.7 | -2.8 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b4045 | yjbJ | -1.7 | -1.8 | predicted stress response protein (NCBI) | compare |
| b3741 | gidA | -1.7 | -6.8 | glucose-inhibited division protein A (NCBI) | compare |
| b4201 | priB | -1.7 | -2.6 | primosomal replication protein N (NCBI) | compare |
| b1551 | b1551 | -1.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1257 | yciE | -1.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b3162 | deaD | -1.7 | -4.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1292 | sapC | -1.7 | -2.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0737 | tolQ | -1.7 | -3.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0082 | mraW | -1.7 | -2.6 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0866 | ybjQ | -1.7 | -0.8 | hypothetical protein (NCBI) | compare |
| b1730 | ydjO | -1.7 | -2.0 | predicted protein (RefSeq) | compare |
| b1950 | fliR | -1.7 | -4.5 | flagellar biosynthesis protein R (NCBI) | conserved |
| b0739 | tolA | -1.6 | -3.4 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1941 | fliI | -1.6 | -5.9 | flagellum-specific ATP synthase (NCBI) | conserved |
| b3838 | tatB | -1.6 | -5.5 | sec-independent translocase (NCBI) | compare |
| b3806 | cyaA | -1.6 | -5.5 | adenylate cyclase (NCBI) | compare |
| b1860 | ruvB | -1.6 | -1.3 | Holliday junction DNA helicase B (NCBI) | compare |
| b3035 | tolC | -1.6 | -7.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1048 | mdoG | -1.6 | -5.4 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3198 | kdsC | -1.6 | -2.4 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3791 | rffA | -1.6 | -7.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3839 | tatC | -1.6 | -4.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1361 | ydaW | -1.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3871 | bipA | -1.5 | -7.7 | GTP-binding protein (NCBI) | compare |
| b2318 | truA | -1.5 | -3.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1830 | prc | -1.5 | -5.8 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0888 | trxB | -1.5 | -3.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4000 | hupA | -1.5 | -3.4 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b0741 | pal | -1.5 | -2.3 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4128 | yjdK | -1.5 | -2.5 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -1.5 | -4.1 | tRNA modification GTPase (NCBI) | compare |
| b3977 | tyrU | -1.5 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b2363 | yfdT | -1.5 | -2.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1160 | elbA | -1.5 | -1.8 | hypothetical protein (NCBI) | compare |
| b3199 | yrbK | -1.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b2897 | ygfY | -1.5 | -2.7 | hypothetical protein (NCBI) | compare |
| b1080 | flgI | -1.5 | -5.6 | homolog of Salmonella P-ring of flagella basal body (VIMSS) | conserved |
| b2642 | yfjW | -1.5 | -1.5 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1948 | fliP | -1.5 | -5.1 | flagellar biosynthesis protein P (NCBI) | compare |
| b1583 | ynfB | -1.4 | -2.7 | hypothetical protein (NCBI) | compare |
| b2216 | rcsD | -1.4 | -8.1 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) | compare |
| b1187 | fadR | -1.4 | -2.7 | fatty acid metabolism regulator (NCBI) | compare |
| b1879 | flhA | -1.4 | -5.5 | flagellar biosynthesis protein A (NCBI) | conserved |
| b3387 | dam | -1.4 | -8.2 | DNA adenine methylase (NCBI) | compare |
| b1923 | fliC | -1.4 | -5.7 | flagellin (NCBI) | compare |
| b1073 | flgB | -1.4 | -3.9 | flagellar basal-body rod protein B (NCBI) | compare |
| b4066 | yjcF | -1.4 | -3.0 | hypothetical protein (NCBI) | compare |
| b4660 | yhiL | -1.4 | -1.7 | no description | compare |
| b3761 | trpT | -1.4 | -0.8 | tRNA-Trp (NCBI) | compare |
| b1892 | flhD | -1.4 | -4.9 | DNA-binding transcriptional dual regulator with FlhC (RefSeq) | compare |
| b2281 | nuoI | -1.4 | -2.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1290 | sapF | -1.4 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1922 | fliA | -1.4 | -3.8 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | compare |
| b4481 | rffT | -1.4 | -5.9 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1167 | ymgC | -1.4 | -1.1 | hypothetical protein (NCBI) | compare |
| b1412 | azoR | -1.4 | -1.4 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1049 | mdoH | -1.4 | -7.0 | glucosyltransferase MdoH (NCBI) | compare |
| b2286 | nuoC | -1.4 | -4.7 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1497 | b1497 | -1.4 | -1.9 | putative enzyme (VIMSS) | compare |
| b1077 | flgF | -1.4 | -3.5 | flagellar component of cell-proximal portion of basal-body rod (NCBI) | compare |
| b1075 | flgD | -1.4 | -2.5 | flagellar basal body rod modification protein D (NCBI) | compare |
| b3728 | pstS | -1.3 | -4.5 | phosphate transporter subunit (NCBI) | compare |
| b3164 | pnp | -1.3 | -2.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1079 | flgH | -1.3 | -3.6 | flagellar L-ring protein precursor H (NCBI) | compare |
| b1709 | btuD | -1.3 | -1.0 | vitamin B12-transporter ATPase (NCBI) | compare |
| b3261 | fis | -1.3 | -2.4 | DNA-binding protein Fis (NCBI) | compare |
| b2297 | pta | -1.3 | -1.3 | phosphate acetyltransferase (NCBI) | compare |
| b1949 | fliQ | -1.3 | -1.2 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1946 | fliN | -1.3 | -1.7 | flagellar motor switch protein (NCBI) | compare |
| b3613 | yibP | -1.3 | -2.8 | putative membrane protein (VIMSS) | compare |
| b1176 | minC | -1.3 | -2.2 | septum formation inhibitor (NCBI) | compare |
| b4578 | insP | -1.3 | -1.7 | no description | compare |
| b1891 | flhC | -1.3 | -2.1 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b1804 | rnd | -1.3 | -2.1 | ribonuclease D (NCBI) | compare |
| b1078 | flgG | -1.3 | -5.2 | flagellar component of cell-distal portion of basal-body rod (NCBI) | compare |
| b1273 | yciN | -1.3 | -1.6 | hypothetical protein (NCBI) | compare |
| b0232 | yafN | -1.3 | -0.9 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1095 | fabF | -1.3 | -3.9 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b2614 | grpE | -1.2 | -1.2 | heat shock protein (NCBI) | compare |
| b3787 | rffD | -1.2 | -6.3 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3002 | yqhA | -1.2 | -1.3 | hypothetical protein (NCBI) | compare |
| b0310 | ykgH | -1.2 | -2.3 | predicted inner membrane protein (NCBI) | compare |
| b3940 | metL | -1.2 | -4.9 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b2051 | wcaH | -1.2 | -1.0 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2314 | dedD | -1.2 | -1.9 | putative lipoprotein (VIMSS) | compare |
| b1940 | fliH | -1.2 | -2.4 | flagellar biosynthesis; export of flagellar proteins? (VIMSS) | compare |
| b1074 | flgC | -1.2 | -1.2 | flagellar basal-body rod protein C (NCBI) | compare |
| b1072 | flgA | -1.2 | -3.4 | flagellar basal body P-ring biosynthesis protein A (NCBI) | compare |
| b0406 | tgt | -1.2 | -3.7 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b4253 | yjgL | -1.2 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b1889 | motB | -1.2 | -3.0 | flagellar motor protein MotB (NCBI) | conserved |
| b3616 | tdh | -1.2 | -4.4 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1175 | minD | -1.2 | -4.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2937 | speB | -1.2 | -4.5 | agmatinase (NCBI) | compare |
| b1880 | flhB | -1.2 | -5.0 | flagellar biosynthesis protein B (NCBI) | conserved |
| b0294 | ykgK | -1.2 | -3.9 | predicted regulator (NCBI) | compare |
| b1540 | ydfH | -1.2 | -0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1925 | fliS | -1.2 | -4.2 | flagellar protein FliS (NCBI) | conserved |
| b2808 | gcvA | -1.2 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4215 | ytfI | -1.2 | -3.2 | hypothetical protein (NCBI) | compare |
| b0798 | ybiA | -1.2 | -1.6 | hypothetical protein (NCBI) | compare |
| b2846 | yqeH | -1.2 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4552 | yrhC | -1.2 | -0.7 | no description | compare |
| b0723 | sdhA | -1.2 | -5.6 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b4441 | glmY | -1.2 | -0.9 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b3250 | mreC | -1.2 | -0.9 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1888 | cheA | -1.2 | -3.3 | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) | compare |
| b1658 | purR | -1.1 | -4.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b0018 | mokC | -1.1 | -0.6 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1945 | fliM | -1.1 | -2.4 | flagellar motor switch protein M (NCBI) | conserved |