| | gene | name | fitness | t score | description | |
|---|
| b0683 | fur | -5.9 | -2.4 | ferric uptake regulator (NCBI) | compare |
| b0741 | pal | -5.8 | -4.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1850 | eda | -5.7 | -2.7 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1949 | fliQ | -5.6 | -3.0 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1882 | cheY | -5.6 | -1.3 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0737 | tolQ | -5.4 | -3.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0014 | dnaK | -5.2 | -2.8 | molecular chaperone DnaK (NCBI) | compare |
| b3390 | aroK | -5.0 | -2.9 | shikimate kinase I (NCBI) | compare |
| b0222 | lpcA | -4.7 | -5.2 | phosphoheptose isomerase (NCBI) | compare |
| b2846 | yqeH | -4.7 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b3463 | ftsE | -4.7 | -7.8 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4704 | arrS | -4.6 | -1.6 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b0688 | pgm | -4.5 | -5.3 | phosphoglucomutase (NCBI) | compare |
| b1286 | rnb | -4.5 | -5.5 | exoribonuclease II (NCBI) | compare |
| b3164 | pnp | -4.4 | -4.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3398 | yrfF | -4.4 | -4.8 | predicted inner membrane protein (NCBI) | compare |
| b1499 | ydeO | -4.3 | -2.7 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b2567 | rnc | -4.3 | -2.3 | ribonuclease III (NCBI) | compare |
| b0739 | tolA | -4.3 | -7.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3778 | rep | -4.2 | -12.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3500 | gor | -4.2 | -2.7 | glutathione reductase (NCBI) | compare |
| b0439 | lon | -4.2 | -6.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3725 | pstB | -4.2 | -2.9 | phosphate transporter subunit (NCBI) | compare |
| b1861 | ruvA | -4.1 | -2.6 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3636 | rpmG | -4.1 | -2.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b3183 | obgE | -4.1 | -2.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1942 | fliJ | -4.1 | -1.4 | flagellar biosynthesis chaperone (NCBI) | compare |
| b4375 | prfC | -4.1 | -6.8 | peptide chain release factor 3 (NCBI) | compare |
| b4239 | treC | -4.0 | -7.7 | trehalose-6-P hydrolase (NCBI) | compare |
| b3619 | rfaD | -4.0 | -7.6 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2935 | tktA | -3.9 | -3.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2288 | nuoA | -3.9 | -4.4 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1860 | ruvB | -3.9 | -2.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b0500 | ybbD | -3.9 | -2.3 | hypothetical protein (RefSeq) | compare |
| b1293 | sapB | -3.9 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0564 | appY | -3.9 | -1.3 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3026 | qseC | -3.9 | -8.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0623 | cspE | -3.8 | -1.8 | cold shock protein E (NCBI) | compare |
| b2330 | yfcB | -3.8 | -2.4 | putative adenine-specific methylase (VIMSS) | compare |
| b3052 | rfaE | -3.8 | -8.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3609 | secB | -3.8 | -5.6 | export protein SecB (NCBI) | compare |
| b0605 | ahpC | -3.8 | -6.1 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3790 | rffC | -3.8 | -6.7 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b4651 | yibW | -3.8 | -2.4 | no description | compare |
| b3386 | rpe | -3.7 | -2.6 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2699 | recA | -3.6 | -2.5 | recombinase A (NCBI) | compare |
| b1712 | ihfA | -3.6 | -3.7 | integration host factor subunit alpha (NCBI) | compare |
| b2314 | dedD | -3.5 | -3.9 | putative lipoprotein (VIMSS) | compare |
| b2576 | srmB | -3.5 | -5.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b1236 | galU | -3.5 | -7.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1950 | fliR | -3.5 | -5.8 | flagellar biosynthesis protein R (NCBI) | conserved |
| b0888 | trxB | -3.5 | -4.3 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4177 | purA | -3.4 | -5.3 | adenylosuccinate synthetase (NCBI) | compare |
| b2830 | nudH | -3.4 | -2.5 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2110 | yehC | -3.4 | -3.9 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3792 | wzxE | -3.4 | -7.6 | O-antigen translocase (NCBI) | compare |
| b0740 | tolB | -3.4 | -6.5 | translocation protein TolB precursor (NCBI) | compare |
| b4443 | gcvB | -3.3 | -1.6 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b3839 | tatC | -3.3 | -9.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2175 | spr | -3.3 | -3.9 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1167 | ymgC | -3.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b3631 | rfaG | -3.2 | -17.1 | glucosyltransferase I (NCBI) | compare |
| b3630 | rfaP | -3.2 | -14.1 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3462 | ftsX | -3.2 | -8.4 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1863 | ruvC | -3.2 | -4.0 | Holliday junction resolvase (NCBI) | compare |
| b3620 | rfaF | -3.2 | -7.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4202 | rpsR | -3.1 | -2.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b0890 | ftsK | -3.1 | -11.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0603 | ybdO | -3.1 | -3.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0080 | fruR | -3.1 | -7.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2569 | lepA | -3.1 | -6.1 | GTP-binding protein LepA (NCBI) | compare |
| b2620 | smpB | -3.0 | -2.3 | SsrA-binding protein (NCBI) | compare |
| b3977 | tyrU | -3.0 | -1.0 | tRNA-Tyr (NCBI) | compare |
| b0200 | gmhB | -3.0 | -2.9 | hypothetical protein (NCBI) | compare |
| b0082 | mraW | -3.0 | -4.3 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4481 | rffT | -3.0 | -7.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3842 | rfaH | -3.0 | -5.6 | transcriptional activator RfaH (NCBI) | compare |
| b2820 | recB | -3.0 | -4.5 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2894 | xerD | -2.9 | -1.9 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1938 | fliF | -2.9 | -6.5 | flagellar M-ring protein (NCBI) | conserved |
| b2635 | ypjK | -2.9 | -2.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4172 | hfq | -2.8 | -2.4 | RNA-binding protein Hfq (NCBI) | compare |
| b2808 | gcvA | -2.8 | -4.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0118 | acnB | -2.8 | -3.3 | aconitate hydratase (NCBI) | compare |
| b1257 | yciE | -2.8 | -3.0 | hypothetical protein (NCBI) | compare |
| b1081 | flgJ | -2.7 | -4.7 | flagellar biosynthesis protein FlgJ (NCBI) | compare |
| b4201 | priB | -2.7 | -3.1 | primosomal replication protein N (NCBI) | compare |
| b1175 | minD | -2.7 | -5.5 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3387 | dam | -2.7 | -10.1 | DNA adenine methylase (NCBI) | compare |
| b1334 | fnr | -2.7 | -2.9 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b3613 | yibP | -2.7 | -5.5 | putative membrane protein (VIMSS) | compare |
| b3871 | bipA | -2.7 | -8.0 | GTP-binding protein (NCBI) | compare |
| b4577 | sgrS | -2.7 | -1.3 | small antisense RNA (NCBI) | compare |
| b1884 | cheR | -2.7 | -4.1 | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | compare |
| b0406 | tgt | -2.7 | -5.2 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3791 | rffA | -2.7 | -5.8 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0018 | mokC | -2.7 | -0.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3261 | fis | -2.6 | -3.7 | DNA-binding protein Fis (NCBI) | compare |
| b3806 | cyaA | -2.6 | -8.4 | adenylate cyclase (NCBI) | compare |
| b3162 | deaD | -2.6 | -6.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2951 | yggS | -2.6 | -3.0 | predicted enzyme (NCBI) | compare |
| b3027 | ygiZ | -2.6 | -1.7 | conserved inner membrane protein (NCBI) | compare |
| b3811 | xerC | -2.6 | -4.4 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0949 | uup | -2.6 | -6.9 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3741 | gidA | -2.5 | -7.9 | glucose-inhibited division protein A (NCBI) | compare |
| b3621 | rfaC | -2.5 | -6.7 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1940 | fliH | -2.5 | -3.2 | flagellar biosynthesis; export of flagellar proteins? (VIMSS) | compare |
| b3504 | yhiS | -2.5 | -3.1 | hypothetical protein (RefSeq) | compare |
| b1434 | ydcN | -2.5 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1943 | fliK | -2.5 | -4.1 | flagellar hook-length control protein (NCBI) | compare |
| b0405 | queA | -2.4 | -3.8 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b1548 | nohA | -2.4 | -1.7 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b4042 | dgkA | -2.4 | -3.5 | diacylglycerol kinase (NCBI) | compare |
| b0051 | ksgA | -2.4 | -4.8 | dimethyladenosine transferase (NCBI) | compare |
| b1497 | b1497 | -2.4 | -3.8 | putative enzyme (VIMSS) | compare |
| b3442 | yhhZ | -2.4 | -2.7 | hypothetical protein (NCBI) | compare |
| b1058 | yceO | -2.4 | -1.4 | hypothetical protein (NCBI) | compare |
| b3002 | yqhA | -2.4 | -1.7 | hypothetical protein (NCBI) | compare |
| b3290 | trkA | -2.4 | -4.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1073 | flgB | -2.4 | -2.7 | flagellar basal-body rod protein B (NCBI) | compare |
| b1182 | hlyE | -2.3 | -2.2 | hemolysin E (VIMSS) | compare |
| b2058 | wcaB | -2.3 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b2847 | yqeI | -2.3 | -5.5 | predicted transcriptional regulator (NCBI) | compare |
| b0053 | surA | -2.3 | -6.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3781 | trxA | -2.3 | -2.3 | thioredoxin 1 (VIMSS) | compare |
| b3205 | yhbJ | -2.2 | -3.6 | hypothetical protein (NCBI) | compare |
| b0866 | ybjQ | -2.2 | -0.9 | hypothetical protein (NCBI) | compare |
| b4000 | hupA | -2.2 | -2.5 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3933 | ftsN | -2.2 | -6.2 | essential cell division protein (NCBI) | compare |
| b0015 | dnaJ | -2.2 | -4.9 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b4458 | oxyS | -2.2 | -0.9 | global regulatory RNA (NCBI) | compare |
| b1922 | fliA | -2.2 | -3.6 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | compare |
| b3706 | trmE | -2.2 | -4.8 | tRNA modification GTPase (NCBI) | compare |
| b2809 | b2809 | -2.2 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0843 | ybjH | -2.2 | -1.7 | hypothetical protein (NCBI) | compare |
| b4497 | yeeL | -2.1 | -4.5 | no description | compare |
| b1545 | pinQ | -2.1 | -1.0 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b4402 | yjjY | -2.1 | -1.2 | hypothetical protein (NCBI) | compare |
| b1831 | proQ | -2.1 | -2.0 | putative solute/DNA competence effector (NCBI) | compare |
| b0738 | tolR | -2.1 | -3.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3838 | tatB | -2.1 | -5.2 | sec-independent translocase (NCBI) | compare |
| b1049 | mdoH | -2.1 | -6.1 | glucosyltransferase MdoH (NCBI) | compare |
| b1830 | prc | -2.1 | -4.5 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1904 | yecR | -2.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b0550 | rusA | -2.1 | -2.3 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b2501 | ppk | -2.1 | -6.3 | polyphosphate kinase (NCBI) | compare |
| b3728 | pstS | -2.1 | -6.0 | phosphate transporter subunit (NCBI) | compare |
| b2614 | grpE | -2.0 | -1.7 | heat shock protein (NCBI) | compare |
| b1079 | flgH | -2.0 | -2.2 | flagellar L-ring protein precursor H (NCBI) | compare |
| b1946 | fliN | -2.0 | -2.1 | flagellar motor switch protein (NCBI) | compare |
| b1505 | ydeT | -2.0 | -4.3 | hypothetical protein (RefSeq) | compare |
| b2910 | zapA | -2.0 | -2.9 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b4355 | tsr | -2.0 | -6.7 | methyl-accepting chemotaxis protein I, serine sensor receptor (NCBI) | compare |
| b2947 | gshB | -2.0 | -3.9 | glutathione synthetase (NCBI) | compare |
| b3009 | yghB | -2.0 | -4.1 | conserved inner membrane protein (NCBI) | compare |
| b4203 | rplI | -2.0 | -3.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b3979 | thrT | -2.0 | -0.8 | tRNA-Thr (NCBI) | compare |
| b3035 | tolC | -2.0 | -4.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1890 | motA | -2.0 | -1.9 | flagellar motor protein MotA (NCBI) | compare |
| b1941 | fliI | -2.0 | -3.8 | flagellum-specific ATP synthase (NCBI) | conserved |
| b3786 | rffE | -2.0 | -8.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1080 | flgI | -2.0 | -3.6 | homolog of Salmonella P-ring of flagella basal body (VIMSS) | conserved |
| b1880 | flhB | -2.0 | -2.9 | flagellar biosynthesis protein B (NCBI) | conserved |
| b1945 | fliM | -2.0 | -3.2 | flagellar motor switch protein M (NCBI) | conserved |
| b2822 | recC | -2.0 | -5.5 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1865 | nudB | -1.9 | -1.5 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2282 | nuoH | -1.9 | -2.6 | NADH dehydrogenase subunit H (NCBI) | compare |
| b3389 | aroB | -1.9 | -5.8 | 3-dehydroquinate synthase (NCBI) | compare |
| b0232 | yafN | -1.9 | -1.0 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1886 | tar | -1.9 | -4.0 | methyl-accepting chemotaxis protein II (NCBI) | compare |
| b1078 | flgG | -1.9 | -3.1 | flagellar component of cell-distal portion of basal-body rod (NCBI) | compare |
| b4153 | frdB | -1.9 | -5.2 | fumarate reductase (anaerobic), Fe-S subunit (NCBI) | compare |
| b3787 | rffD | -1.9 | -7.2 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0907 | serC | -1.9 | -4.1 | phosphoserine aminotransferase (NCBI) | compare |
| b4585 | sroB | -1.9 | -0.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b3169 | nusA | -1.9 | -1.9 | transcription elongation factor NusA (NCBI) | compare |
| b3860 | dsbA | -1.9 | -7.0 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b2897 | ygfY | -1.9 | -2.8 | hypothetical protein (NCBI) | compare |
| b1363 | trkG | -1.9 | -2.9 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1925 | fliS | -1.8 | -3.0 | flagellar protein FliS (NCBI) | conserved |
| b3206 | npr | -1.8 | -3.0 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b4590 | ybfK | -1.8 | -2.8 | hypothetical protein (RefSeq) | compare |
| b1887 | cheW | -1.8 | -3.2 | purine-binding chemotaxis protein (NCBI) | compare |
| b1001 | yccE | -1.8 | -1.8 | hypothetical protein (NCBI) | compare |
| b1888 | cheA | -1.8 | -3.0 | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) | compare |
| b1095 | fabF | -1.8 | -4.3 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1252 | tonB | -1.8 | -3.0 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b4441 | glmY | -1.8 | -1.0 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1176 | minC | -1.8 | -1.9 | septum formation inhibitor (NCBI) | compare |
| b1883 | cheB | -1.8 | -1.6 | chemotaxis-specific methylesterase (NCBI) | compare |
| b1804 | rnd | -1.7 | -2.9 | ribonuclease D (NCBI) | compare |
| b2262 | menB | -1.7 | -2.9 | naphthoate synthase (NCBI) | compare |
| b2421 | cysM | -1.7 | -3.0 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b1677 | lpp | -1.7 | -1.9 | murein lipoprotein (NCBI) | compare |
| b1939 | fliG | -1.7 | -1.6 | flagellar motor switch protein G (NCBI) | compare |
| b4128 | yjdK | -1.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b1077 | flgF | -1.7 | -3.5 | flagellar component of cell-proximal portion of basal-body rod (NCBI) | compare |
| b1693 | aroD | -1.7 | -3.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3348 | slyX | -1.7 | -2.8 | hypothetical protein (NCBI) | compare |
| b0720 | gltA | -1.7 | -4.4 | citrate synthase (NCBI) | compare |