Experiment set6IT054 for Escherichia coli BW25113
LB with D-Cycloserine 0.1 mg/ml
Group: stressMedia: LB + D-Cycloserine (0.1 mg/ml)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 2/2/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1134 C7,C8
Specific Phenotypes
For 8 genes in this experiment
For stress D-Cycloserine in Escherichia coli BW25113
For stress D-Cycloserine across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Alanine biosynthesis | 1 |
| DNA repair, bacterial | 1 |
| Oxidative stress | 1 |
| Pyruvate Alanine Serine Interconversions | 1 |
| Transport of Manganese | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Alanine and aspartate metabolism
- D-Alanine metabolism
- Glutamate metabolism
- Methionine metabolism
- Valine, leucine and isoleucine biosynthesis
- Lysine biosynthesis
- Lysine degradation
- Arginine and proline metabolism
- Aminophosphonate metabolism
- Nucleotide sugars metabolism
- Peptidoglycan biosynthesis
- Carbon fixation in photosynthetic organisms
- Porphyrin and chlorophyll metabolism
- Caprolactam degradation
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: