Experiment set6IT047 for Agrobacterium fabrum C58

Compare to:

Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days

200 most detrimental genes:

  gene name fitness t score description  
Atu8035 +1.6 1.7 hypothetical protein compare
Atu4897 +1.6 2.8 hypothetical protein compare
Atu3001 +1.6 3.4 hypothetical protein compare
Atu2368 +1.3 2.6 hypothetical protein compare
Atu1573 +1.1 2.0 hypothetical protein compare
Atu8018 +1.1 1.3 hypothetical protein compare
Atu3009 +1.0 1.2 exopolysaccharide production protein compare
Atu3733 +1.0 2.9 hypothetical protein compare
Atu1581 +1.0 1.4 hypothetical protein compare
Atu2204 +1.0 2.5 hypothetical protein compare
Atu0524 +1.0 5.3 transcriptional regulator, LuxR family compare
Atu0907 +1.0 2.3 Phosphinothricin acetyltransferase compare
Atu2787 +0.9 1.2 hypothetical protein compare
Atu4894 +0.9 4.8 transposase compare
Atu2349 +0.9 2.1 hypothetical protein compare
Atu3604 +0.9 1.0 hypoxanthine phosphoribosyltransferase compare
Atu1241 +0.9 2.6 hypothetical protein compare
Atu1160 +0.9 1.7 hypothetical protein compare
Atu8162 +0.9 0.8 hypothetical protein compare
Atu1685 +0.9 1.1 hypothetical protein compare
Atu2017 +0.9 1.4 hypothetical protein compare
Atu4892 +0.8 5.8 hypothetical protein compare
Atu3014 +0.8 1.9 hypothetical protein compare
Atu3006 +0.8 4.0 hypothetical protein compare
Atu4896 +0.8 1.7 acetyltransferase compare
Atu4405 +0.8 1.6 periplasmic nitrate reductase NapE compare
Atu0861 +0.8 2.2 hypothetical protein compare
Atu2406 +0.8 2.2 hypothetical protein compare
Atu1667 +0.8 1.6 hypothetical protein compare
Atu1847 +0.8 2.1 hypothetical protein compare
Atu0471 +0.8 2.4 hypothetical protein compare
Atu0236 +0.8 1.9 hypothetical protein compare
Atu1501 +0.7 1.6 hypothetical protein compare
Atu2270 +0.7 1.7 ATP-dependent Clp protease, proteolytic subunit compare
Atu1291 +0.7 2.2 hypothetical protein compare
Atu4139 +0.7 1.3 hypothetical protein compare
Atu1777 +0.7 2.9 hypothetical protein compare
Atu8176 +0.7 1.7 hypothetical protein compare
Atu1994 +0.7 2.4 acyl-CoA hydrolase compare
Atu3627 +0.7 2.5 hypothetical protein compare
Atu1182 +0.7 1.5 hypothetical protein compare
Atu8025 +0.7 1.0 hypothetical protein compare
Atu5448 +0.7 1.8 hypothetical protein compare
Atu1660 +0.7 1.3 hypothetical protein compare
Atu1694 +0.7 1.7 hypothetical protein compare
Atu1737 +0.7 1.3 hypothetical protein compare
Atu0544 +0.7 0.9 hypothetical protein compare
Atu2442 +0.7 1.8 hypothetical protein compare
Atu3012 +0.6 1.3 hypothetical protein compare
Atu2789 +0.6 1.9 hypothetical protein compare
Atu8087 +0.6 0.9 putative peptidoglycan binding protein compare
Atu8179 +0.6 2.2 hypothetical protein compare
Atu3794 +0.6 3.1 FadR family transcriptional regulator compare
Atu1896 +0.6 2.5 hypothetical protein compare
Atu1952 +0.6 0.8 hypothetical protein compare
Atu4893 +0.6 2.5 hypothetical protein compare
Atu3901 +0.6 2.7 nitrite reductase small subunit compare
Atu4067 +0.6 2.0 hypothetical protein compare
Atu0640 +0.6 1.3 hypothetical protein compare
Atu1727 +0.6 1.3 hypothetical protein compare
Atu3327 +0.6 2.6 succinoglycan exopolysaccharide synthesis protein compare
Atu3562 +0.6 1.5 hypothetical protein compare
Atu6168 +0.6 3.8 component of type IV secretion system, pilin subunit compare
Atu1871 +0.6 2.1 glutathione S-transferase compare
Atu1734 +0.6 1.5 hypothetical protein compare
Atu4690 +0.6 2.4 amino acid ABC transporter ATPase/permease compare
Atu3390 +0.6 4.3 ABC transporter substrate-binding protein compare
Atu0986 +0.6 0.7 hypothetical protein compare
Atu0892 +0.6 2.5 hypothetical protein compare
Atu4852 +0.6 2.4 hypothetical protein compare
Atu4884 +0.6 1.4 hypothetical protein compare
Atu3610 +0.6 2.4 transporter compare
Atu8161 +0.6 0.8 hypothetical protein compare
Atu6033 +0.5 2.5 conjugal transfer protein compare
Atu8012 +0.5 0.8 hypothetical protein compare
Atu1801 +0.5 1.1 hypothetical protein compare
Atu3650 +0.5 2.2 hypothetical protein compare
Atu1336 +0.5 1.9 hypothetical protein compare
Atu2313 +0.5 1.9 hypothetical protein compare
Atu5512 +0.5 2.0 hypothetical protein compare
Atu3491 +0.5 1.4 hypothetical protein compare
Atu1494 +0.5 3.0 metal dependent hydrolase compare
Atu3772 +0.5 2.0 hypothetical protein compare
Atu8150 +0.5 2.1 hypothetical protein compare
Atu0926 +0.5 1.7 hypothetical protein compare
Atu3256 +0.5 2.3 zinc-binding dehydrogenase compare
Atu2188 +0.5 2.8 oxidoreductase compare
Atu1692 +0.5 2.7 hypothetical protein compare
Atu4882 +0.5 1.0 hypothetical protein compare
Atu0761 +0.5 1.9 hypothetical protein compare
Atu1499 +0.5 2.3 penicillin binding protein compare
Atu0437 +0.5 2.4 hypothetical protein compare
Atu0785 +0.5 1.9 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu3018 +0.5 1.6 hypothetical protein compare
Atu4757 +0.5 2.1 Xaa-Pro dipeptidase compare
Atu4837 +0.5 1.3 hypothetical protein compare
Atu0115 +0.5 0.6 hypothetical protein compare
Atu4221 +0.5 1.8 hypothetical protein compare
Atu2633 +0.5 1.0 RhtB family transporter compare
Atu0152 +0.5 1.3 hypothetical protein compare
Atu3044 +0.5 2.3 asparaginase compare
Atu1249 +0.5 2.6 hypothetical protein compare
Atu4486 +0.5 1.7 nitroreductase compare
Atu1883 +0.5 2.6 hypothetical protein compare
Atu1254 +0.5 0.6 transcriptional regulator, ArsR family compare
Atu3387 +0.5 1.2 sigma factor compare
Atu6153 +0.5 1.8 conserved hypothetical protein compare
Atu5449 +0.5 2.8 heat-shock protein compare
Atu3389 +0.5 3.7 iron ABC transporter permease compare
Atu2137 +0.5 1.4 hypothetical protein compare
Atu2208 +0.5 1.1 secretion chaperone compare
Atu0063 +0.5 1.8 ABC transporter, substrate binding protein (sugar) compare
Atu0225 +0.5 0.5 hypothetical protein compare
Atu2462 +0.5 0.7 hypothetical protein compare
Atu1170 +0.5 1.2 RhtB family transporter compare
Atu1233 +0.5 2.0 hypothetical protein compare
Atu0924 +0.5 1.0 hypothetical protein compare
Atu6165 +0.5 0.7 hypothetical protein compare
Atu4274 +0.5 1.5 hypothetical protein compare
Atu0463 +0.5 2.2 hypothetical protein compare
Atu0124 +0.5 1.8 hypothetical protein compare
Atu3070 +0.4 1.9 allantoate amidohydrolase compare
Atu0134 +0.4 1.8 hypothetical protein compare
Atu1656 +0.4 2.1 tolB protein compare
Atu0097 +0.4 1.8 hypothetical protein compare
Atu1868 +0.4 1.6 tRNA/rRNA methyltransferase compare
Atu3011 +0.4 0.9 ArsR family transcriptional regulator compare
Atu3315 +0.4 1.7 UDP-glucose 4-epimerase compare
Atu4441 +0.4 2.0 amidase compare
Atu8029 +0.4 0.8 hypothetical protein compare
Atu3919 +0.4 1.6 hypothetical protein compare
Atu4881 +0.4 2.3 hypothetical protein compare
Atu2335 +0.4 0.8 hypothetical protein compare
Atu2421 +0.4 2.1 chitooligosaccharide deacetylase compare
Atu1846 +0.4 0.6 hypothetical protein compare
Atu0262 +0.4 1.4 acetyltransferase compare
Atu6065 +0.4 2.3 conserved hypothetical protein compare
Atu4507 +0.4 2.3 dehydrogenase compare
Atu4888 +0.4 1.7 hypothetical protein compare
Atu4145 +0.4 2.5 hypothetical protein compare
Atu3429 +0.4 0.6 hypothetical protein compare
Atu8126 +0.4 1.6 putative phage tail protein I compare
Atu3647 +0.4 1.3 hypothetical protein compare
Atu2605 +0.4 1.3 hypothetical protein compare
Atu8202 +0.4 1.3 hypothetical protein compare
Atu1326 +0.4 1.2 acetyltransferase compare
Atu3335 +0.4 1.9 3-methyladenine DNA glycosylase compare
Atu8139 +0.4 2.0 hypothetical protein compare
Atu4622 +0.4 3.0 dipeptide ABC transporter permease compare
Atu1154 +0.4 1.2 hypothetical protein compare
Atu2075 +0.4 1.0 chemotaxis protein compare
Atu8144 +0.4 1.0 hypothetical protein compare
Atu3605 +0.4 2.3 hypothetical protein compare
Atu1511 +0.4 1.2 hypothetical protein compare
Atu4190 +0.4 2.4 calcium-binding protein, regucalcin compare
Atu1754 +0.4 1.1 hypothetical protein compare
Atu4093 +0.4 1.1 hypothetical protein compare
Atu3016 +0.4 1.8 phosphoglyceromutase compare
Atu1098 +0.4 1.2 hypothetical protein compare
Atu2480 +0.4 2.1 transcriptional regulator, LysR family compare
Atu2681 +0.4 2.0 hypothetical protein compare
Atu3010 +0.4 2.6 hypothetical protein compare
Atu0117 +0.4 1.7 hypothetical protein compare
Atu6178 +0.4 3.0 two component response regulator compare
Atu8152 +0.4 1.6 hypothetical protein compare
Atu2201 +0.4 1.1 hydrolase compare
Atu5159 +0.4 1.3 hypothetical protein compare
Atu6164 +0.4 2.8 trans-zeatin secretion protein compare
Atu4515 +0.4 1.5 branched chain amino acid ABC transporter ATPase compare
Atu3344 +0.4 1.7 radical activating protein compare
Atu3180 +0.4 1.7 ABC transporter permease compare
Atu1628 +0.4 1.1 hypothetical protein compare
Atu0755 +0.4 1.3 hypothetical protein compare
Atu2067 +0.4 0.4 hypothetical protein compare
Atu3428 +0.4 1.5 hypothetical protein compare
Atu4454 +0.4 1.9 RpiR family transcriptional regulator compare
Atu0805 +0.4 1.1 hypothetical protein compare
Atu3515 +0.4 1.1 hypothetical protein compare
Atu0220 +0.4 1.0 components of type IV pilus compare
Atu0583 +0.4 1.0 hypothetical protein compare
Atu6166 +0.4 3.4 two component sensor kinase compare
Atu1835 +0.4 1.2 hypothetical protein compare
Atu8181 +0.4 0.8 hypothetical protein compare
Atu0956 +0.4 1.0 phage prohead protease compare
Atu3063 +0.4 1.3 ABC transporter permease compare
Atu0965 +0.4 1.3 hypothetical protein compare
Atu2407 +0.4 1.6 urease gamma subunit compare
Atu0230 +0.4 0.8 hypothetical protein compare
Atu0156 +0.4 1.5 hypothetical protein compare
Atu2153 +0.4 1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu4674 +0.4 1.6 GntR family transcriptional regulator compare
Atu1008 +0.4 1.5 hypothetical protein compare
Atu0106 +0.4 2.2 cold shock protein compare
Atu3466 +0.4 1.0 ArsR family transcriptional regulator compare
Atu1659 +0.4 2.0 hypothetical protein compare
Atu0960 +0.4 2.0 MFS permease compare
Atu4495 +0.4 1.7 hypothetical protein compare
Atu8082 +0.4 0.6 hypothetical protein compare
Atu1500 +0.4 1.3 rare lipoprotein A compare
Atu1223 +0.4 0.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days across organisms