Experiment set6IT032 for Agrobacterium fabrum C58

Compare to:

Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days

200 most detrimental genes:

  gene name fitness t score description  
Atu2349 +1.6 3.5 hypothetical protein compare
Atu2787 +1.5 1.5 hypothetical protein compare
Atu1581 +1.2 1.4 hypothetical protein compare
Atu0986 +1.2 1.5 hypothetical protein compare
Atu6165 +1.2 1.5 hypothetical protein compare
Atu1846 +1.2 1.8 hypothetical protein compare
Atu3120 +1.2 1.1 hypothetical protein compare
Atu3183 +1.1 1.0 hypothetical protein compare
Atu8161 +1.0 1.4 hypothetical protein compare
Atu2433 +1.0 1.1 hypothetical protein compare
Atu6178 +1.0 7.5 two component response regulator compare
Atu1455 +1.0 1.8 hypothetical protein compare
Atu3794 +0.9 5.8 FadR family transcriptional regulator compare
Atu8035 +0.9 1.4 hypothetical protein compare
Atu8176 +0.8 1.6 hypothetical protein compare
Atu6166 +0.8 6.8 two component sensor kinase compare
Atu0538 +0.8 1.7 hypothetical protein compare
Atu8024 +0.8 4.1 hypothetical protein compare
Atu3001 +0.8 1.7 hypothetical protein compare
Atu1667 +0.7 1.2 hypothetical protein compare
Atu3468 +0.7 0.7 hypothetical protein compare
Atu5468 +0.7 2.3 hypothetical protein compare
Atu0941 +0.7 0.7 hypothetical protein compare
Atu5163 +0.7 1.6 type IV secretion protein AvhB2 compare
Atu1503 +0.7 0.7 hypothetical protein compare
Atu1062 +0.7 1.2 phosphatidylserine synthase compare
Atu4486 +0.7 2.7 nitroreductase compare
Atu1149 +0.7 1.1 adenylate cyclase compare
Atu5152 +0.7 2.2 hypothetical protein compare
Atu8159 +0.7 1.1 hypothetical protein compare
Atu2677 +0.7 1.9 protein tyrosine phosphatase compare
Atu2348 +0.7 2.7 sugar binding protein compare
Atu3705 +0.7 2.5 hypothetical protein compare
Atu1916 +0.7 2.6 hypothetical protein compare
Atu6195 +0.7 2.8 conserved hypothetical protein compare
Atu3791 +0.7 4.2 L-asparaginase compare
Atu0031 +0.7 0.9 PTS system, IIA component compare
Atu4232 +0.7 1.7 GntR family transcriptional regulator compare
Atu2234 +0.7 1.5 hypothetical protein compare
Atu3521 +0.6 3.3 permease compare
Atu1641 +0.6 3.2 hypothetical protein compare
Atu3733 +0.6 1.3 hypothetical protein compare
Atu3226 +0.6 3.8 GntR family transcriptional regulator compare
Atu2368 +0.6 0.9 hypothetical protein compare
Atu1185 +0.6 2.0 hypothetical protein compare
Atu8036 +0.6 1.5 protein YBGT-like protein compare
Atu5034 +0.6 1.8 hypothetical protein compare
Atu1232 +0.6 1.1 hypothetical protein compare
Atu1570 +0.6 0.5 hypothetical protein compare
Atu8018 +0.6 0.6 hypothetical protein compare
Atu8087 +0.6 0.6 putative peptidoglycan binding protein compare
Atu3886 +0.6 4.4 lysophospholipase compare
Atu1189 +0.6 1.5 hypothetical protein compare
Atu4458 +0.6 2.0 hypothetical protein compare
Atu3851 +0.6 2.5 hypothetical protein compare
Atu2270 +0.6 1.1 ATP-dependent Clp protease, proteolytic subunit compare
Atu3759 +0.6 0.8 hypothetical protein compare
Atu1629 +0.6 0.8 transcriptional regulator, ArsR family compare
Atu1682 +0.6 2.5 hypothetical protein compare
Atu1835 +0.6 2.3 hypothetical protein compare
Atu0961 +0.6 2.0 hypothetical protein compare
Atu3034 +0.6 3.0 ROK family transcriptional regulator compare
Atu1896 +0.6 2.0 hypothetical protein compare
Atu2442 +0.6 1.0 hypothetical protein compare
Atu2660 +0.6 3.1 hypothetical protein compare
Atu1311 +0.6 2.6 acetyltransferase compare
Atu1818 +0.6 1.6 hypothetical protein compare
Atu4518 +0.6 1.6 branched chain amino acid ABC transporter permease compare
Atu4327 +0.6 3.1 hypothetical protein compare
Atu3537 +0.6 1.7 hypothetical protein compare
Atu4306 +0.6 1.8 two component response regulator compare
Atu1484 +0.6 2.3 transcriptional regulator compare
Atu4767 +0.6 1.8 hypothetical protein compare
Atu5136 +0.6 2.0 transcriptional repressor of the blcABC operon compare
Atu2194 +0.6 1.8 hypothetical protein compare
Atu0904 +0.5 2.1 hypothetical protein compare
Atu0707 +0.5 2.4 transcriptional regulator, LuxR family compare
Atu3466 +0.5 1.5 ArsR family transcriptional regulator compare
Atu1223 +0.5 0.6 hypothetical protein compare
Atu0344 +0.5 1.4 hypothetical protein compare
Atu1559 +0.5 1.1 hypothetical protein compare
Atu3674 +0.5 1.5 hypothetical protein compare
Atu3289 +0.5 1.5 thiamine-phosphate pyrophosphorylase compare
Atu0528 +0.5 1.6 large conductance mechanosensitive channel protein compare
Atu2500 +0.5 2.6 monooxygenase (pyrimidine utilization protein A) compare
Atu8082 +0.5 0.6 hypothetical protein compare
Atu8031 +0.5 2.9 hypothetical protein compare
Atu8202 +0.5 1.7 hypothetical protein compare
Atu0551 +0.5 1.8 flagellar protein FLGA precursor compare
Atu1871 +0.5 2.0 glutathione S-transferase compare
Atu1139 +0.5 2.1 hypothetical protein compare
Atu2177 +0.5 2.2 hypothetical protein compare
Atu5485 +0.5 1.1 hypothetical protein compare
Atu3448 +0.5 2.1 dibenzothiophene desulfurization protein B compare
Atu5492 +0.5 1.6 hypothetical protein compare
Atu4137 +0.5 2.6 hypothetical protein compare
Atu1236 +0.5 3.1 polysaccharide biosynthesis glycosyltransferase compare
Atu0553 +0.5 2.1 flagellar hook-basal body complex protein compare
Atu1878 +0.5 1.7 hypothetical protein compare
Atu1905 +0.5 2.4 short chain dehydrogenase compare
Atu3032 +0.5 1.8 hypothetical protein compare
Atu4753 +0.5 2.2 amino acid ABC transporter permease compare
Atu8198 +0.5 2.8 hypothetical protein compare
Atu1644 +0.5 1.2 hypothetical protein compare
Atu4176 +0.5 1.4 hypothetical protein compare
Atu3651 +0.5 3.1 hypothetical protein compare
Atu5504 +0.5 2.1 hypothetical protein compare
Atu1325 +0.5 1.0 acetyltransferase compare
Atu3175 +0.5 1.9 hypothetical protein compare
Atu3264 +0.5 1.8 IclR family transcriptional regulator compare
Atu0723 +0.5 0.8 FAD dependent oxidoreductase compare
Atu2794 +0.5 1.3 uroporphyrin-III C-methyltransferase compare
Atu8057 +0.5 2.0 hypothetical protein compare
Atu3345 +0.5 1.2 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu0107 +0.5 1.1 hypothetical protein compare
Atu6177 +0.5 3.4 component of type IV secretion system compare
Atu3017 +0.5 0.6 phosphoglyceromutase compare
Atu1499 +0.5 2.3 penicillin binding protein compare
Atu3492 +0.5 1.7 sugar kinase compare
Atu4535 +0.5 1.7 amino acid ABC transporter substrate-binding protein compare
Atu1052 +0.5 1.4 hypothetical protein compare
Atu8187 +0.5 2.3 hypothetical protein compare
Atu5449 +0.5 2.7 heat-shock protein compare
Atu8063 +0.5 1.6 hypothetical protein compare
Atu2436 +0.5 1.6 hypothetical protein compare
Atu0531 +0.5 1.8 hypothetical protein compare
Atu2603 +0.5 1.5 ABC transporter, membrane spanning protein (maltose) compare
Atu1727 +0.5 1.7 hypothetical protein compare
Atu2063 +0.5 0.9 hypothetical protein compare
Atu0926 +0.5 1.0 hypothetical protein compare
Atu5142 +0.5 0.7 hypothetical protein compare
Atu5494 +0.5 2.3 hypothetical protein compare
Atu8092 +0.5 2.4 hypothetical protein compare
Atu2424 +0.5 1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu4674 +0.5 2.6 GntR family transcriptional regulator compare
Atu0095 +0.5 1.5 hypothetical protein compare
Atu3786 +0.5 2.4 two component response regulator compare
Atu0654 +0.5 1.9 transcriptional regulator, LysR family compare
Atu3045 +0.5 1.2 hypothetical protein compare
Atu2670 +0.5 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4409 +0.5 1.8 periplasmic nitrate reductase small subunit compare
Atu3225 +0.5 2.6 ABC transporter permease compare
Atu4406 +0.5 1.5 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu0061 +0.5 2.8 ATP-dependent DNA helicase compare
Atu3432 +0.5 2.5 desulfurizing enzyme compare
Atu2279 +0.5 2.4 ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) compare
Atu4095 +0.5 0.9 hypothetical protein compare
Atu0236 +0.5 0.9 hypothetical protein compare
Atu2286 +0.5 0.7 hypothetical protein compare
Atu8012 +0.5 0.7 hypothetical protein compare
Atu0785 +0.5 1.7 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu1882 +0.4 1.5 usg protein compare
Atu1338 +0.4 1.7 3-oxoacyl-(acyl carrier protein) reductase compare
Atu1031 +0.4 1.3 hypothetical protein compare
Atu4190 +0.4 2.2 calcium-binding protein, regucalcin compare
Atu6164 +0.4 2.7 trans-zeatin secretion protein compare
Atu2162 +0.4 1.8 periplasmic immunogenic protein compare
Atu1396 +0.4 2.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1115 +0.4 2.1 two component sensor kinase compare
Atu0363 +0.4 2.4 putative tRNA (guanine-N(7)-)-methyltransferase compare
Atu3867 +0.4 2.4 hypothetical protein compare
Atu2110 +0.4 1.8 sarcosine oxidase compare
Atu8152 +0.4 2.2 hypothetical protein compare
Atu2374 +0.4 2.2 hypothetical protein compare
Atu2574 +0.4 1.8 hypothetical protein compare
Atu3545 +0.4 1.3 hypothetical protein compare
Atu0627 +0.4 1.5 carboxymethylenebutenolidase compare
Atu3393 +0.4 1.1 pseudoazurin compare
Atu4442 +0.4 1.8 hypothetical protein compare
Atu0223 +0.4 2.4 components of type IV pilus, prepilin peptidase compare
Atu4068 +0.4 1.0 sarcosine oxidase delta subunit compare
Atu2511 +0.4 1.6 D-alanine aminotransferase compare
Atu3553 +0.4 2.7 hypothetical protein compare
Atu3256 +0.4 1.1 zinc-binding dehydrogenase compare
Atu3522 +0.4 1.7 glucans biosynthesis protein compare
Atu3636 +0.4 2.6 hypothetical protein compare
Atu3610 +0.4 1.0 transporter compare
Atu2138 +0.4 1.8 dehydrogenase compare
Atu3227 +0.4 2.0 AraC family transcriptional regulator compare
Atu1702 +0.4 1.7 stationary-phase survival protein compare
Atu2406 +0.4 0.9 hypothetical protein compare
Atu1793 +0.4 2.3 phosphatidylcholine synthase compare
Atu5043 +0.4 2.0 hypothetical protein compare
Atu3149 +0.4 2.5 sugar ABC transporter permease compare
Atu1986 +0.4 2.6 two component sensor kinase compare
Atu3947 +0.4 2.0 oxidoreductase compare
Atu1974 +0.4 2.1 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu4311 +0.4 1.0 sarcosine oxidase delta subunit compare
Atu3182 +0.4 1.5 hypothetical protein compare
Atu0622 +0.4 2.6 metallo-beta-lactamase superfamily protein compare
Atu3588 +0.4 1.6 DNA-3-methyladenine glycosidase II compare
Atu0375 +0.4 0.9 small heat shock protein compare
Atu4504 +0.4 2.7 MarR family transcriptional regulator compare
Atu4274 +0.4 1.7 hypothetical protein compare
Atu0119 +0.4 0.4 hypothetical protein compare
Atu4067 +0.4 1.7 hypothetical protein compare
Atu1249 +0.4 1.6 hypothetical protein compare
Atu4122 +0.4 1.6 LysR family transcriptional regulator compare
Atu3315 +0.4 1.1 UDP-glucose 4-epimerase compare
Atu0673 +0.4 2.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days across organisms