Experiment set6IT007 for Agrobacterium fabrum C58

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
Atu1225 -2.3 -3.3 hypothetical protein compare
Atu3763 -2.1 -2.1 hypothetical protein compare
Atu0399 -1.8 -5.9 dihydroorotase compare
Atu4053 -1.8 -1.8 succinoglycan biosynthesis protein compare
Atu4616 -1.7 -2.7 dTDP-4-dehydrorhamnose reductase compare
Atu3469 -1.7 -3.6 phosphoglyceromutase compare
Atu1810 -1.6 -1.6 hypothetical protein compare
Atu0486 -1.6 -4.3 dihydroorotate dehydrogenase compare
Atu1446 -1.6 -2.6 two component response regulator compare
Atu1359 -1.5 -1.0 dnaK deletion suppressor protein compare
Atu0777 -1.4 -1.1 hypothetical protein compare
Atu1163 -1.4 -2.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0031 -1.4 -1.6 PTS system, IIA component compare
Atu1354 -1.4 -1.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu4317 -1.4 -3.3 TetR family transcriptional regulator compare
Atu6189 -1.3 -2.0 protein secretion chaperone compare
Atu3299 -1.3 -3.3 hypothetical protein compare
Atu0331 -1.3 -1.7 sigma-54 modulation protein compare
Atu0769 -1.2 -1.3 protoheme IX farnesyltransferase compare
Atu0142 -1.2 -2.6 cytochrome o ubiquinol oxidase subunit II compare
Atu3009 -1.2 -1.1 exopolysaccharide production protein compare
Atu3739 -1.1 -2.1 phosphoglycerate kinase compare
Atu0298 -1.1 -4.7 orotidine 5 compare
Atu0086 -1.1 -1.1 ribosome-binding factor A compare
Atu0030 -1.1 -1.4 phosphocarrier protein HPr compare
Atu0971 -1.1 -3.0 two component sensor kinase compare
Atu0533 -1.1 -1.8 putative inhibitor of septum formation compare
Atu4407 -1.1 -2.5 periplasmic nitrate reductase, NapD protein compare
Atu0361 -1.0 -2.3 transcriptional regulator compare
Atu2439 -1.0 -0.8 hypothetical protein compare
Atu0544 -1.0 -2.2 hypothetical protein compare
Atu2125 -1.0 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0762 -1.0 -2.3 hypothetical protein compare
Atu2640 -1.0 -3.2 hypothetical protein compare
Atu1836 -1.0 -1.6 hypothetical protein compare
Atu2684 -1.0 -1.3 hypothetical protein compare
Atu1141 -1.0 -2.5 Phosphoribosylglycinamide synthetase compare
Atu0237 -0.9 -2.1 hypothetical protein compare
Atu3755 -0.9 -3.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2376 -0.9 -1.7 hypothetical protein compare
Atu1439 -0.9 -2.0 hypothetical protein compare
Atu4897 -0.9 -1.1 hypothetical protein compare
Atu0400 -0.9 -3.0 orotate phosphoribosyltransferase compare
Atu2052 -0.9 -4.2 hypothetical protein compare
Atu4540 -0.9 -1.9 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0101 -0.9 -2.7 cytochrome c compare
Atu2057 -0.9 -1.9 DNA helicase II compare
Atu0188 -0.9 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu2235 -0.9 -1.2 hypothetical protein compare
Atu1683 -0.8 -1.5 hypothetical protein compare
Atu8018 -0.8 -0.8 hypothetical protein compare
Atu1739 -0.8 -2.4 permease compare
Atu0641 -0.8 -2.5 hypothetical protein compare
Atu0784 -0.8 -1.8 hypothetical protein compare
Atu2800 -0.8 -1.3 precorrin-3B C17-methyltransferase compare
Atu5427 -0.8 -2.9 hypothetical protein compare
Atu3604 -0.8 -2.8 hypoxanthine phosphoribosyltransferase compare
Atu4148 -0.8 -4.0 UDP-glucuronic acid epimerase compare
Atu0638 -0.8 -1.3 hypothetical protein compare
Atu2824 -0.8 -2.7 hypothetical protein compare
Atu2555 -0.8 -3.1 L-lysine 2,3-aminomutase compare
Atu1308 -0.8 -3.2 aspartate carbamoyl transferase catalytic subunit compare
Atu3429 -0.8 -0.9 hypothetical protein compare
Atu3468 -0.8 -0.7 hypothetical protein compare
Atu0894 -0.8 -1.4 ABC transporter, membrane spanning protein compare
Atu4072 -0.7 -1.2 nodulation protein N compare
Atu1323 -0.7 -1.8 hypothetical protein compare
Atu2207 -0.7 -2.7 two component sensor kinase compare
Atu0026 -0.7 -0.7 hypothetical protein compare
Atu0434 -0.7 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1850 -0.7 -2.3 phosphoribosylformylglycinamidine synthetase II compare
Atu1513 -0.7 -3.3 ABC excinuclease subunit A compare
Atu0499 -0.7 -3.9 hypothetical protein compare
Atu3688 -0.7 -1.9 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu3757 -0.7 -1.5 hypothetical protein compare
Atu3593 -0.7 -2.9 hypothetical protein compare
Atu1535 -0.7 -2.1 cytochrome c oxidase, FixQ chain compare
Atu2432 -0.7 -1.7 hypothetical protein compare
Atu2808 -0.7 -3.5 cobyric acid synthase compare
Atu2650 -0.7 -3.7 glycerol-3-phosphate dehydrogenase compare
Atu8052 -0.6 -0.9 hypothetical protein compare
Atu2692 -0.6 -2.0 intracellular septation protein compare
Atu0036 -0.6 -1.4 hypothetical protein compare
Atu0580 -0.6 -1.5 flagellar biosynthetic protein compare
Atu4290 -0.6 -2.0 hypothetical protein compare
Atu5109 -0.6 -2.0 conjugal transfer protein compare
Atu3287 -0.6 -2.7 thiamine biosynthesis associated protein compare
Atu0941 -0.6 -0.6 hypothetical protein compare
Atu4166 -0.6 -1.4 UDP-glucose 4-epimerase compare
Atu4342 -0.6 -1.5 hypothetical protein compare
Atu1628 -0.6 -1.2 hypothetical protein compare
Atu1542 -0.6 -2.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2827 -0.6 -1.5 hypothetical protein compare
Atu2831 -0.6 -2.4 glucose inhibited division protein A compare
Atu2633 -0.6 -0.9 RhtB family transporter compare
Atu2335 -0.6 -0.8 hypothetical protein compare
Atu1845 -0.6 -1.8 phosphoribosylformylglycinamidine synthase I compare
Atu3324 -0.6 -1.2 hypothetical protein compare
Atu1891 -0.6 -1.2 cobalamin biosynthesis protein compare
Atu3084 -0.6 -1.6 RNA polymerase sigma factor compare
Atu8096 -0.6 -0.9 hypothetical protein compare
Atu3183 -0.6 -0.5 hypothetical protein compare
Atu4610 -0.5 -3.8 sugar nucleotide epimerase/dehydratase compare
Atu2809 -0.5 -2.8 cobalamin biosynthesis protein compare
Atu2669 -0.5 -1.8 RhtB family transporter compare
Atu3505 -0.5 -2.4 3-hydroxyisobutyryl-CoA hydrolase compare
Atu1364 -0.5 -2.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0781 -0.5 -1.5 hypothetical protein compare
Atu3110 -0.5 -2.2 hypothetical protein compare
Atu0050 -0.5 -2.3 two component response regulator compare
Atu2273 -0.5 -1.6 hypothetical protein compare
Atu4391 -0.5 -1.2 nitric oxide reductase NorE protein compare
Atu3912 -0.5 -2.5 hypothetical protein compare
Atu0354 -0.5 -1.0 ferric uptake regulator compare
Atu4362 -0.5 -1.8 hypothetical protein compare
Atu1770 -0.5 -3.2 glutamine synthetase compare
Atu1464 -0.5 -2.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu0267 -0.5 -2.5 hypothetical protein compare
Atu2083 -0.5 -1.5 DNA repair protein RecN compare
Atu2120 -0.5 -2.8 O-methyltransferase compare
Atu0225 -0.5 -0.5 hypothetical protein compare
Atu4756 -0.5 -2.4 hypothetical protein compare
Atu4471 -0.5 -2.9 ABC transporter substrate-binding protein compare
Atu0815 -0.5 -2.3 hypothetical protein compare
Atu1339 -0.5 -1.9 ribonuclease E compare
Atu1307 -0.5 -1.6 dihydroorotase compare
Atu2590 -0.5 -2.8 hypothetical protein compare
Atu5451 -0.5 -0.9 hypothetical protein compare
Atu1658 -0.5 -2.5 conserved protein involved in phosphoglycerol modification of cyclic glucan compare
Atu0445 -0.5 -1.5 hypothetical protein compare
Atu2017 -0.5 -0.7 hypothetical protein compare
Atu1103 -0.5 -1.6 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1099 -0.5 -2.0 hypothetical protein compare
Atu2592 -0.5 -2.7 hypothetical protein compare
Atu1774 -0.5 -2.6 ABC transporter, substrate binding protein (peptide) compare
Atu2045 -0.5 -2.5 HFLK protein compare
Atu3388 -0.5 -1.8 iron ABC transporter ATPase compare
Atu2478 -0.5 -1.5 hypothetical protein compare
Atu2799 -0.5 -1.8 precorrin-6x reductase compare
Atu3396 -0.5 -2.6 ABC transporter substrate-binding protein compare
Atu1190 -0.5 -1.3 hypothetical protein compare
Atu0250 -0.5 -1.5 hypothetical protein compare
Atu0882 -0.5 -2.5 hypothetical protein compare
Atu3463 -0.5 -1.4 non-heme chloroperoxidase compare
Atu4366 -0.5 -1.7 short chain dehydrogenase compare
Atu2209 -0.5 -1.2 pyrroline-5-carboxylate reductase compare
Atu2515 -0.5 -1.9 ABC transporter, nucleotide binding/ATPase protein (dipeptide) compare
Atu0662 -0.5 -1.9 transcriptional regulator, GntR family compare
Atu0138 -0.5 -2.3 surfeit 1 compare
Atu0043 -0.5 -1.1 imidazoleglycerol-phosphate dehydratase compare
Atu2662 -0.5 -0.7 acetyltransferase compare
Atu6045 -0.5 -1.0 replication protein C compare
Atu1620 -0.5 -3.0 triosephosphate isomerase compare
Atu3395 -0.4 -2.4 iron (III ABC transporter permease ABC transporter permease compare
Atu3573 -0.4 -1.4 hypothetical protein compare
Atu2394 -0.4 -1.7 Regulator of Biofilm formation, Fnr Family compare
Atu2184 -0.4 -1.3 transcriptional regulator, AsnC family compare
Atu3773 -0.4 -1.3 hypothetical protein compare
Atu4860 -0.4 -2.1 hypothetical protein compare
Atu4782 -0.4 -2.0 two component response regulator compare
Atu4749 -0.4 -1.5 fructose transport system kinase compare
Atu0943 -0.4 -1.0 hypothetical protein compare
Atu4470 -0.4 -2.0 iron ABC transporter ATPase compare
Atu0507 -0.4 -1.7 potassium efflux system protein compare
Atu5150 -0.4 -1.7 glutathione S-transferase compare
Atu3277 -0.4 -1.6 nitrilotriacetate monooxygenase compare
Atu0474 -0.4 -1.5 putative RNA polymerase sigma-70 factor compare
Atu2140 -0.4 -0.9 hypothetical protein compare
Atu1803 -0.4 -2.1 cold shock protein compare
Atu3406 -0.4 -2.0 hypothetical protein compare
Atu0885 -0.4 -0.7 hypothetical protein compare
Atu3730 -0.4 -0.6 hypothetical protein compare
Atu1805 -0.4 -1.3 hypothetical protein compare
Atu2068 -0.4 -1.2 hypothetical protein compare
Atu2796 -0.4 -2.0 precorrin-4 C11-methyltransferase compare
Atu8033 -0.4 -1.5 hypothetical protein compare
Atu0730 -0.4 -1.3 hypothetical protein compare
Atu5540 -0.4 -0.5 hypothetical protein compare
Atu0647 -0.4 -1.5 phosphoribosylamine--glycine ligase compare
Atu3265 -0.4 -1.3 hypothetical protein compare
Atu0041 -0.4 -0.6 glutamine amidotransferase compare
Atu0322 -0.4 -1.6 enoyl CoA hydratase compare
Atu8133 -0.4 -1.4 hypothetical protein compare
Atu2491 -0.4 -1.1 hypothetical protein compare
Atu6114 -0.4 -1.1 hypothetical protein compare
Atu0152 -0.4 -0.9 hypothetical protein compare
Atu3471 -0.4 -1.8 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
Atu0572 -0.4 -0.7 hypothetical protein compare
Atu3014 -0.4 -0.7 hypothetical protein compare
Atu1980 -0.4 -1.0 hypothetical protein compare
Atu8117 -0.4 -0.8 hypothetical protein compare
Atu3044 -0.4 -1.2 asparaginase compare
Atu2517 -0.4 -2.5 ABC transporter, membrane spanning protein (dipeptide) compare
Atu1217 -0.4 -1.9 cysteine synthase compare
Atu4242 -0.4 -1.9 hypothetical protein compare
Atu0292 -0.4 -1.8 iron-sulfur cluster binding protein compare
Atu1784 -0.4 -1.5 hypothetical protein compare
Atu0908 -0.4 -1.7 transcriptional regulator compare
Atu3692 -0.4 -1.4 sigma factor compare
Atu2790 -0.4 -0.8 3-isopropylmalate dehydratase, small subunit compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb experiments

For lb LB across organisms