| | gene | name | fitness | t score | description | |
|---|
| b0053 | surA | -2.6 | -3.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0088 | murD | -2.2 | -2.4 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2286 | nuoC | -2.1 | -5.6 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1984 | asnW | -2.0 | -1.6 | tRNA-Asn (NCBI) | compare |
| b0049 | apaH | -2.0 | -3.0 | diadenosinetetraphosphatase (NCBI) | compare |
| b2282 | nuoH | -2.0 | -3.4 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2168 | fruK | -1.9 | -1.7 | 1-phosphofructokinase (NCBI) | compare |
| b3621 | rfaC | -1.8 | -5.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2284 | nuoF | -1.8 | -4.6 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b4201 | priB | -1.8 | -3.1 | primosomal replication protein N (NCBI) | compare |
| b2318 | truA | -1.7 | -3.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2287 | nuoB | -1.7 | -3.9 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2576 | srmB | -1.7 | -3.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b4702 | mgtL | -1.7 | -2.2 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0888 | trxB | -1.7 | -3.6 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3778 | rep | -1.7 | -7.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4178 | yjeB | -1.7 | -5.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4513 | kdpF | -1.7 | -2.4 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2518 | ndk | -1.7 | -2.6 | nucleoside diphosphate kinase (NCBI) | compare |
| b2281 | nuoI | -1.6 | -2.8 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0080 | fruR | -1.6 | -5.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1293 | sapB | -1.6 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1712 | ihfA | -1.6 | -2.0 | integration host factor subunit alpha (NCBI) | compare |
| b2283 | nuoG | -1.5 | -6.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b4699 | fnrS | -1.5 | -0.9 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3811 | xerC | -1.5 | -1.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2699 | recA | -1.5 | -1.0 | recombinase A (NCBI) | compare |
| b2278 | nuoL | -1.5 | -7.2 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2808 | gcvA | -1.5 | -4.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2277 | nuoM | -1.5 | -5.2 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1236 | galU | -1.5 | -4.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2906 | visC | -1.5 | -5.9 | hypothetical protein (NCBI) | compare |
| b4535 | yniD | -1.5 | -1.6 | predicted protein (RefSeq) | compare |
| b3619 | rfaD | -1.4 | -3.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1358 | ydaT | -1.4 | -1.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1290 | sapF | -1.4 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3169 | nusA | -1.4 | -3.1 | transcription elongation factor NusA (NCBI) | compare |
| b3636 | rpmG | -1.4 | -1.7 | 50S ribosomal protein L33 (NCBI) | compare |
| b2276 | nuoN | -1.3 | -4.4 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b4592 | yccB | -1.3 | -1.4 | hypothetical protein (RefSeq) | compare |
| b2279 | nuoK | -1.3 | -1.9 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3052 | rfaE | -1.3 | -4.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1855 | lpxM | -1.3 | -4.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2280 | nuoJ | -1.3 | -4.5 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2934 | cmtB | -1.3 | -0.8 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0247 | ykfG | -1.2 | -1.5 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b4163 | glyV | -1.2 | -1.7 | tRNA-Gly (NCBI) | compare |
| b0437 | clpP | -1.2 | -4.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2498 | upp | -1.2 | -2.3 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3728 | pstS | -1.2 | -1.8 | phosphate transporter subunit (NCBI) | compare |
| b2804 | fucU | -1.2 | -2.8 | L-fucose mutarotase (NCBI) | compare |
| b3706 | trmE | -1.2 | -2.6 | tRNA modification GTPase (NCBI) | compare |
| b3026 | qseC | -1.2 | -3.2 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1307 | pspD | -1.2 | -2.0 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b1545 | pinQ | -1.2 | -0.5 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b2620 | smpB | -1.2 | -1.3 | SsrA-binding protein (NCBI) | compare |
| b0740 | tolB | -1.1 | -3.2 | translocation protein TolB precursor (NCBI) | compare |
| b1382 | ynbE | -1.1 | -1.4 | predicted lipoprotein (NCBI) | compare |
| b0729 | sucD | -1.1 | -2.8 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3493 | pitA | -1.1 | -5.1 | phosphate transporter, low-affinity (NCBI) | compare |
| b0890 | ftsK | -1.1 | -3.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b4146 | yjeK | -1.1 | -1.5 | predicted lysine aminomutase (NCBI) | compare |
| b4042 | dgkA | -1.1 | -1.3 | diacylglycerol kinase (NCBI) | compare |
| b4179 | vacB | -1.1 | -4.4 | putative enzyme (VIMSS) | compare |
| b0720 | gltA | -1.1 | -5.2 | citrate synthase (NCBI) | compare |
| b1961 | dcm | -1.1 | -1.5 | DNA cytosine methylase (NCBI) | compare |
| b3620 | rfaF | -1.1 | -3.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2567 | rnc | -1.1 | -1.0 | ribonuclease III (NCBI) | compare |
| b2830 | nudH | -1.1 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1685 | ydiH | -1.1 | -1.5 | predicted protein (RefSeq) | compare |
| b1084 | rne | -1.1 | -4.3 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1291 | sapD | -1.1 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2528 | iscA | -1.1 | -1.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1383 | ydbL | -1.1 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b3162 | deaD | -1.1 | -3.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0222 | lpcA | -1.1 | -2.2 | phosphoheptose isomerase (NCBI) | compare |
| b0200 | gmhB | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b3871 | bipA | -1.0 | -6.1 | GTP-binding protein (NCBI) | compare |
| b3075 | ebgR | -1.0 | -3.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4441 | glmY | -1.0 | -1.5 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1185 | dsbB | -1.0 | -2.5 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0051 | ksgA | -1.0 | -3.3 | dimethyladenosine transferase (NCBI) | compare |
| b3766 | ilvL | -1.0 | -2.5 | ilvG operon leader peptide (NCBI) | compare |
| b0726 | sucA | -1.0 | -2.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1400 | paaY | -1.0 | -2.5 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b4171 | miaA | -1.0 | -2.3 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0722 | sdhD | -1.0 | -2.8 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1536 | ydeI | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b3962 | udhA | -1.0 | -4.3 | putative oxidoreductase (VIMSS) | compare |
| b0149 | mrcB | -1.0 | -7.1 | penicillin-binding protein 1b (NCBI) | compare |
| b2935 | tktA | -1.0 | -1.4 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1269 | rluB | -0.9 | -2.3 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3816 | corA | -0.9 | -4.7 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b1969 | yedW | -0.9 | -3.0 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b3290 | trkA | -0.9 | -1.4 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0502 | ylbG | -0.9 | -2.3 | no description | compare |
| b3870 | glnA | -0.9 | -2.3 | glutamine synthetase (NCBI) | compare |
| b3741 | gidA | -0.9 | -2.2 | glucose-inhibited division protein A (NCBI) | compare |
| b3181 | greA | -0.9 | -3.6 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0430 | cyoC | -0.9 | -3.2 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b0739 | tolA | -0.9 | -2.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1575 | dicB | -0.9 | -1.5 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3979 | thrT | -0.9 | -0.4 | tRNA-Thr (NCBI) | compare |
| b0505 | allA | -0.9 | -2.7 | ureidoglycolate hydrolase (NCBI) | compare |
| b3198 | kdsC | -0.9 | -2.0 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3205 | yhbJ | -0.9 | -2.5 | hypothetical protein (NCBI) | compare |
| b4426 | isrA | -0.9 | -1.6 | unknown RNA (NCBI) | compare |
| b1667 | ydhR | -0.9 | -2.0 | hypothetical protein (NCBI) | compare |
| b3035 | tolC | -0.9 | -4.4 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0438 | clpX | -0.9 | -3.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2990 | hybG | -0.9 | -1.5 | hydrogenase 2 accessory protein (NCBI) | compare |
| b3426 | glpD | -0.9 | -2.0 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1548 | nohA | -0.9 | -1.0 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b3414 | gntY | -0.9 | -3.5 | predicted gluconate transport associated protein (NCBI) | compare |
| b2947 | gshB | -0.8 | -2.7 | glutathione synthetase (NCBI) | compare |
| b4655 | ythA | -0.8 | -1.1 | expressed protein (RefSeq) | compare |
| b1505 | ydeT | -0.8 | -0.8 | hypothetical protein (RefSeq) | compare |
| b3002 | yqhA | -0.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b0741 | pal | -0.8 | -2.2 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1540 | ydfH | -0.8 | -1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3631 | rfaG | -0.8 | -6.1 | glucosyltransferase I (NCBI) | compare |
| b3849 | trkH | -0.8 | -5.6 | potassium transporter (NCBI) | compare |
| b2025 | hisF | -0.8 | -2.9 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b0721 | sdhC | -0.8 | -3.0 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2569 | lepA | -0.8 | -2.5 | GTP-binding protein LepA (NCBI) | compare |
| b3164 | pnp | -0.8 | -1.7 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0471 | ybaB | -0.8 | -2.2 | hypothetical protein (NCBI) | compare |
| b4406 | yaeP | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b3999 | yjaG | -0.8 | -2.8 | hypothetical protein (NCBI) | compare |
| b0018 | mokC | -0.8 | -1.0 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3791 | rffA | -0.8 | -4.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4701 | sokX | -0.8 | -0.5 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3916 | pfkA | -0.8 | -1.4 | 6-phosphofructokinase (NCBI) | compare |
| b4648 | ysaC | -0.8 | -1.6 | no description | compare |
| b0386 | proC | -0.8 | -3.0 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4494 | arpB | -0.8 | -1.5 | no description | compare |
| b3545 | proK | -0.8 | -1.0 | tRNA-Pro (NCBI) | compare |
| b1105 | ycfM | -0.8 | -2.1 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4402 | yjjY | -0.8 | -0.8 | hypothetical protein (NCBI) | compare |
| b1370 | insH-5 | -0.7 | -0.9 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b0723 | sdhA | -0.7 | -4.6 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b2289 | lrhA | -0.7 | -4.9 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b3613 | yibP | -0.7 | -2.3 | putative membrane protein (VIMSS) | compare |
| b2824 | ygdB | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2679 | proX | -0.7 | -2.9 | glycine betaine transporter subunit (NCBI) | compare |
| b3844 | fre | -0.7 | -3.1 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0658 | ybeX | -0.7 | -0.5 | predicteed ion transport (NCBI) | compare |
| b3623 | rfaK | -0.7 | -1.3 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b2479 | gcvR | -0.7 | -2.6 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1282 | yciH | -0.7 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2684 | mprA | -0.7 | -2.1 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b1160 | elbA | -0.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b0428 | cyoE | -0.7 | -3.7 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1921 | fliZ | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1533 | ydeD | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -0.7 | -2.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b1778 | yeaA | -0.7 | -1.2 | methionine sulfoxide reductase B (NCBI) | compare |
| b1497 | b1497 | -0.7 | -0.4 | putative enzyme (VIMSS) | compare |
| b3806 | cyaA | -0.7 | -2.4 | adenylate cyclase (NCBI) | compare |
| b1524 | yneH | -0.7 | -0.6 | predicted glutaminase (NCBI) | compare |
| b1482 | osmC | -0.7 | -1.1 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3742 | mioC | -0.7 | -2.5 | flavodoxin (NCBI) | compare |
| b1583 | ynfB | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b3389 | aroB | -0.7 | -4.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b1124 | potC | -0.7 | -2.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2784 | relA | -0.6 | -4.3 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b1235 | rssB | -0.6 | -3.5 | response regulator of RpoS (NCBI) | compare |
| b3781 | trxA | -0.6 | -2.0 | thioredoxin 1 (VIMSS) | compare |
| b2426 | ucpA | -0.6 | -1.5 | putative oxidoreductase (VIMSS) | compare |
| b3860 | dsbA | -0.6 | -3.8 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b4414 | tff | -0.6 | -2.0 | unknown RNA (NCBI) | compare |
| b4375 | prfC | -0.6 | -2.2 | peptide chain release factor 3 (NCBI) | compare |
| b0728 | sucC | -0.6 | -2.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4589 | ylcI | -0.6 | -1.3 | hypothetical protein (RefSeq) | compare |
| b3236 | mdh | -0.6 | -3.6 | malate dehydrogenase (NCBI) | compare |
| b3935 | priA | -0.6 | -1.5 | primosome assembly protein PriA (NCBI) | compare |
| b0580 | ybdJ | -0.6 | -1.4 | predicted inner membrane protein (NCBI) | compare |
| b3281 | aroE | -0.6 | -4.6 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3040 | ygiE | -0.6 | -4.0 | zinc transporter ZupT (NCBI) | compare |
| b2363 | yfdT | -0.6 | -1.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3649 | rpoZ | -0.6 | -1.7 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3911 | cpxA | -0.6 | -4.3 | two-component sensor protein (NCBI) | compare |
| b1580 | rspB | -0.6 | -2.7 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b0439 | lon | -0.6 | -2.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1576 | ydfD | -0.6 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b3839 | tatC | -0.6 | -2.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3099 | yqjE | -0.6 | -2.1 | conserved inner membrane protein (NCBI) | compare |
| b0928 | aspC | -0.6 | -2.9 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3867 | hemN | -0.6 | -4.0 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b4319 | fimG | -0.6 | -3.8 | minor component of type 1 fimbriae (NCBI) | compare |
| b4541 | yehK | -0.6 | -2.0 | hypothetical protein (NCBI) | compare |
| b4614 | sokA | -0.6 | -1.5 | no description | compare |
| b1591 | b1591 | -0.6 | -1.3 | putative oxidoreductase component (VIMSS) | compare |
| b4481 | rffT | -0.6 | -2.5 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2822 | recC | -0.6 | -1.6 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0738 | tolR | -0.6 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1442 | ydcU | -0.6 | -2.4 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b2506 | yfgI | -0.6 | -1.1 | hypothetical protein (NCBI) | compare |
| b1790 | yeaM | -0.6 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0866 | ybjQ | -0.6 | -0.6 | hypothetical protein (NCBI) | compare |