Experiment set68S107 for Escherichia coli BW25113

Compare to:

LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
b3926 glpK -3.1 -15.5 glycerol kinase (NCBI) compare
b3927 glpF -1.9 -8.1 glycerol facilitator (NCBI) compare
b1285 gmr -1.6 -6.4 modulator of Rnase II stability (NCBI) compare
b3779 gpp -1.4 -8.1 guanosine pentaphosphatase/exopolyphosphatase (NCBI) compare
b3456 livM -1.4 -7.3 leucine/isoleucine/valine transporter subunit (NCBI) compare
b3457 livH -1.2 -5.2 leucine/isoleucine/valine transporter subunit (NCBI) compare
b2786 barA +1.0 9.4 hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) compare
b4169 amiB +1.0 7.1 N-acetylmuramoyl-l-alanine amidase II (NCBI) compare
b1039 csgE +1.2 6.5 predicted transport protein (NCBI) compare
b4141 yjeH +1.2 9.0 predicted transporter (NCBI) compare
b1128 ycfD +1.2 7.1 orf, hypothetical protein (VIMSS) compare
b1299 puuR +1.2 6.1 DNA-binding transcriptional repressor (NCBI) compare
b4109 yjdA +1.3 10.5 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) compare
b4110 yjcZ +1.3 9.2 orf, hypothetical protein (VIMSS) compare
b2480 bcp +1.4 5.7 thioredoxin-dependent thiol peroxidase (NCBI) compare
b3934 cytR +1.4 9.5 DNA-binding transcriptional dual regulator (NCBI) compare
b2067 yegE +1.5 10.3 predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) compare
b3643 rph +1.5 5.2 ribonuclease PH (NCBI) compare
b1284 yciT +1.6 6.0 predicted DNA-binding transcriptional regulator (NCBI) compare
b0121 speE +2.0 13.3 spermidine synthase (NCBI) compare
b0120 speD +2.1 14.6 S-adenosylmethionine decarboxylase proenzyme (NCBI) compare
b2218 rcsC +2.8 16.3 hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) compare
b1341 b1341 +3.0 23.5 orf, hypothetical protein (VIMSS) compare
b2216 rcsD +3.1 11.9 phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) compare
b1042 csgA +3.3 18.5 cryptic curlin major subunit (NCBI) compare
b1040 csgD +4.0 8.7 DNA-binding transcriptional activator in two-component regulatory system (NCBI) compare
b1041 csgB +4.1 22.2 curlin nucleator protein, minor subunit in curli complex (NCBI) compare
b3752 rbsK +4.2 15.0 ribokinase (NCBI) compare
b1037 csgG +4.7 33.8 outer membrane lipoprotein (NCBI) compare
b1038 csgF +4.8 13.8 predicted transport protein (NCBI) compare
b2127 mlrA +5.5 20.0 DNA-binding transcriptional regulator (NCBI) compare


Specific phenotypes for carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 across organisms