Experiment set68S106 for Escherichia coli BW25113

Compare to:

LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
b3926 glpK -3.3 -18.1 glycerol kinase (NCBI) compare
b3927 glpF -2.0 -9.1 glycerol facilitator (NCBI) compare
b2603 yfiR -1.4 -6.5 hypothetical protein (NCBI) compare
b2587 kgtP +1.2 6.4 alpha-ketoglutarate transporter (NCBI) compare
b4141 yjeH +1.2 9.9 predicted transporter (NCBI) compare
b4109 yjdA +1.2 10.1 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) compare
b4110 yjcZ +1.3 8.6 orf, hypothetical protein (VIMSS) compare
b2480 bcp +1.3 5.5 thioredoxin-dependent thiol peroxidase (NCBI) compare
b2067 yegE +1.3 8.8 predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) compare
b1039 csgE +1.4 7.7 predicted transport protein (NCBI) compare
b1284 yciT +1.6 8.3 predicted DNA-binding transcriptional regulator (NCBI) compare
b0120 speD +1.6 10.8 S-adenosylmethionine decarboxylase proenzyme (NCBI) compare
b0121 speE +1.7 11.9 spermidine synthase (NCBI) compare
b2216 rcsD +2.3 10.7 phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) compare
b2218 rcsC +2.5 15.8 hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) compare
b1042 csgA +2.6 16.5 cryptic curlin major subunit (NCBI) compare
b1341 b1341 +2.7 20.2 orf, hypothetical protein (VIMSS) compare
b3752 rbsK +2.7 13.7 ribokinase (NCBI) compare
b1041 csgB +3.4 16.3 curlin nucleator protein, minor subunit in curli complex (NCBI) compare
b1040 csgD +3.8 10.3 DNA-binding transcriptional activator in two-component regulatory system (NCBI) compare
b1037 csgG +4.1 28.8 outer membrane lipoprotein (NCBI) compare
b1038 csgF +4.2 9.8 predicted transport protein (NCBI) compare
b2127 mlrA +4.7 17.2 DNA-binding transcriptional regulator (NCBI) compare


Specific phenotypes for carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 across organisms