Experiment set68S102 for Escherichia coli BW25113

Compare to:

LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
b3926 glpK -3.8 -17.6 glycerol kinase (NCBI) compare
b1285 gmr -2.2 -7.4 modulator of Rnase II stability (NCBI) compare
b3927 glpF -2.1 -8.3 glycerol facilitator (NCBI) compare
b3779 gpp -1.5 -9.0 guanosine pentaphosphatase/exopolyphosphatase (NCBI) compare
b3456 livM -1.2 -6.5 leucine/isoleucine/valine transporter subunit (NCBI) compare
b3457 livH -1.2 -6.0 leucine/isoleucine/valine transporter subunit (NCBI) compare
b1039 csgE +1.0 5.4 predicted transport protein (NCBI) compare
b1128 ycfD +1.0 7.5 orf, hypothetical protein (VIMSS) compare
b4110 yjcZ +1.1 7.6 orf, hypothetical protein (VIMSS) compare
b4141 yjeH +1.1 8.2 predicted transporter (NCBI) compare
b2786 barA +1.1 10.7 hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) compare
b4109 yjdA +1.2 9.8 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) compare
b1914 uvrY +1.2 6.8 response regulator (NCBI) compare
b2480 bcp +1.3 6.0 thioredoxin-dependent thiol peroxidase (NCBI) compare
b2587 kgtP +1.3 7.8 alpha-ketoglutarate transporter (NCBI) compare
b3934 cytR +1.3 8.4 DNA-binding transcriptional dual regulator (NCBI) compare
b3643 rph +1.5 5.0 ribonuclease PH (NCBI) compare
b1284 yciT +1.6 7.1 predicted DNA-binding transcriptional regulator (NCBI) compare
b2067 yegE +1.7 11.3 predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) compare
b0120 speD +1.9 12.4 S-adenosylmethionine decarboxylase proenzyme (NCBI) compare
b0121 speE +2.1 12.7 spermidine synthase (NCBI) compare
b2218 rcsC +2.6 16.5 hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) compare
b2216 rcsD +2.8 11.6 phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) compare
b1040 csgD +2.8 7.1 DNA-binding transcriptional activator in two-component regulatory system (NCBI) compare
b1042 csgA +2.8 16.0 cryptic curlin major subunit (NCBI) compare
b1341 b1341 +3.0 19.4 orf, hypothetical protein (VIMSS) compare
b1041 csgB +3.6 20.1 curlin nucleator protein, minor subunit in curli complex (NCBI) compare
b3752 rbsK +3.8 14.4 ribokinase (NCBI) compare
b1037 csgG +4.0 27.1 outer membrane lipoprotein (NCBI) compare
b2127 mlrA +4.6 17.5 DNA-binding transcriptional regulator (NCBI) compare


Specific phenotypes for carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 across organisms