Experiment set67S85 for Escherichia coli BW25113

Compare to:

Uridine 0.4095 mM carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
b3831 udp -3.7 -15.2 uridine phosphorylase (NCBI) conserved
b4383 deoB -3.5 -12.2 phosphopentomutase (NCBI) conserved
b1422 ydcI -1.9 -6.9 putative transcriptional regulator LYSR-type (VIMSS) compare
b1783 yeaG -1.7 -9.1 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b1836 yebV -1.6 -5.6 orf, hypothetical protein (VIMSS) compare
b1188 ycgB -1.6 -7.8 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b0964 yccT -1.5 -6.4 hypothetical protein (NCBI) compare
b2964 nupG -1.4 -9.3 transport of nucleosides, permease protein (VIMSS) compare
b1784 yeaH -1.3 -5.3 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b2475 ypfJ -1.2 -7.3 hypothetical protein (NCBI) compare
b1687 ydiJ -1.2 -7.8 predicted FAD-linked oxidoreductase (NCBI) compare
b3346 yheO -1.1 -7.2 orf, hypothetical protein (VIMSS) compare
b1042 csgA +1.2 7.1 cryptic curlin major subunit (NCBI) compare
b1041 csgB +1.2 7.8 curlin nucleator protein, minor subunit in curli complex (NCBI) compare
b1341 b1341 +1.5 9.8 orf, hypothetical protein (VIMSS) compare
b1037 csgG +1.5 12.3 outer membrane lipoprotein (NCBI) compare
b2127 mlrA +1.6 9.0 DNA-binding transcriptional regulator (NCBI) compare
b1038 csgF +1.7 9.2 predicted transport protein (NCBI) compare
b3934 cytR +8.2 71.3 DNA-binding transcriptional dual regulator (NCBI) compare


Specific phenotypes for carbon source Uridine across organisms