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Experiment set67S85 for
Escherichia coli BW25113
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Uridine 0.4095 mM carbon source
Genes with
specific
phenotypes:
gene
name
fitness
t score
description
b3831
udp
-3.7
-15.2
uridine phosphorylase (NCBI)
conserved
b4383
deoB
-3.5
-12.2
phosphopentomutase (NCBI)
conserved
b1422
ydcI
-1.9
-6.9
putative transcriptional regulator LYSR-type (VIMSS)
compare
b1783
yeaG
-1.7
-9.1
yeaG component of nitrogen-related signalling system (of yeaGH-ycgB)
(from data)
compare
b1836
yebV
-1.6
-5.6
orf, hypothetical protein (VIMSS)
compare
b1188
ycgB
-1.6
-7.8
ycgB component of nitrogen-related signalling system (of yeaGH-ycgB)
(from data)
compare
b0964
yccT
-1.5
-6.4
hypothetical protein (NCBI)
compare
b2964
nupG
-1.4
-9.3
transport of nucleosides, permease protein (VIMSS)
compare
b1784
yeaH
-1.3
-5.3
yeaH component of nitrogen-related signalling system (of yeaGH-ycgB)
(from data)
compare
b2475
ypfJ
-1.2
-7.3
hypothetical protein (NCBI)
compare
b1687
ydiJ
-1.2
-7.8
predicted FAD-linked oxidoreductase (NCBI)
compare
b3346
yheO
-1.1
-7.2
orf, hypothetical protein (VIMSS)
compare
b1042
csgA
+1.2
7.1
cryptic curlin major subunit (NCBI)
compare
b1041
csgB
+1.2
7.8
curlin nucleator protein, minor subunit in curli complex (NCBI)
compare
b1341
b1341
+1.5
9.8
orf, hypothetical protein (VIMSS)
compare
b1037
csgG
+1.5
12.3
outer membrane lipoprotein (NCBI)
compare
b2127
mlrA
+1.6
9.0
DNA-binding transcriptional regulator (NCBI)
compare
b1038
csgF
+1.7
9.2
predicted transport protein (NCBI)
compare
b3934
cytR
+8.2
71.3
DNA-binding transcriptional dual regulator (NCBI)
compare
Specific phenotypes for carbon source Uridine across organisms