| | gene | name | fitness | t score | description | |
|---|
| b0142 | folK | +2.0 | 2.1 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2903 | gcvP | +1.6 | 14.2 | glycine dehydrogenase (NCBI) | compare |
| b0232 | yafN | +1.5 | 2.1 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2904 | gcvH | +1.4 | 7.8 | glycine cleavage system protein H (NCBI) | compare |
| b4552 | yrhC | +1.3 | 1.9 | no description | compare |
| b2905 | gcvT | +1.3 | 9.8 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b3933 | ftsN | +1.2 | 8.7 | essential cell division protein (NCBI) | compare |
| b3979 | thrT | +1.1 | 0.6 | tRNA-Thr (NCBI) | compare |
| b4701 | sokX | +1.1 | 1.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2808 | gcvA | +1.0 | 4.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2953 | yggU | +0.9 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1961 | dcm | +0.9 | 2.1 | DNA cytosine methylase (NCBI) | compare |
| b4503 | yafF | +0.8 | 0.9 | no description | compare |
| b1685 | ydiH | +0.8 | 2.0 | predicted protein (RefSeq) | compare |
| b4520 | ymgF | +0.8 | 2.5 | hypothetical protein (NCBI) | compare |
| b1038 | csgF | +0.8 | 2.9 | predicted transport protein (NCBI) | compare |
| b2688 | gshA | +0.7 | 4.8 | glutamate--cysteine ligase (NCBI) | compare |
| b4699 | fnrS | +0.7 | 1.1 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1651 | gloA | +0.7 | 2.5 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b2947 | gshB | +0.7 | 4.2 | glutathione synthetase (NCBI) | compare |
| b3194 | yrbE | +0.7 | 4.2 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1037 | csgG | +0.7 | 5.4 | outer membrane lipoprotein (NCBI) | compare |
| b1824 | yobF | +0.6 | 2.0 | hypothetical protein (NCBI) | compare |
| b0632 | dacA | +0.6 | 4.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2343 | b2343 | +0.6 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4418 | sraB | +0.6 | 2.2 | unknown RNA (NCBI) | compare |
| b1733 | chbG | +0.6 | 3.7 | hypothetical protein (NCBI) | compare |
| b1125 | potB | +0.6 | 2.6 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1942 | fliJ | +0.6 | 0.9 | flagellar biosynthesis chaperone (NCBI) | compare |
| b2939 | yqgB | +0.6 | 0.9 | predicted protein (RefSeq) | compare |
| b1849 | purT | +0.6 | 2.2 | phosphoribosylglycinamide formyltransferase 2 (NCBI) | compare |
| b4603 | rseX | +0.6 | 0.8 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b4679 | yohP | +0.6 | 1.6 | expressed protein (RefSeq) | compare |
| b1144 | ymfJ | +0.6 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b2314 | dedD | +0.6 | 3.4 | putative lipoprotein (VIMSS) | compare |
| b2168 | fruK | +0.6 | 1.1 | 1-phosphofructokinase (NCBI) | compare |
| b0059 | hepA | +0.6 | 5.0 | ATP-dependent helicase HepA (NCBI) | compare |
| b2572 | rseA | +0.6 | 3.0 | anti-sigma factor (NCBI) | compare |
| b4588 | ylcH | +0.6 | 2.1 | hypothetical protein, DLP12 prophage (RefSeq) | compare |
| b1524 | yneH | +0.5 | 1.0 | predicted glutaminase (NCBI) | compare |
| b4592 | yccB | +0.5 | 0.8 | hypothetical protein (RefSeq) | compare |
| b2145 | yeiS | +0.5 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b1333 | uspE | +0.5 | 1.9 | stress-induced protein (NCBI) | compare |
| b2114 | metG | +0.5 | 1.8 | methionyl-tRNA synthetase (NCBI) | compare |
| b1514 | lsrC | +0.5 | 2.1 | AI2 transporter (NCBI) | compare |
| b1730 | ydjO | +0.5 | 1.1 | predicted protein (RefSeq) | compare |
| b0149 | mrcB | +0.5 | 4.3 | penicillin-binding protein 1b (NCBI) | compare |
| b1295 | ymjA | +0.5 | 1.6 | hypothetical protein (NCBI) | compare |
| b4175 | hflC | +0.5 | 3.3 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1103 | ycfF | +0.5 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1792 | yeaO | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4505 | insX | +0.5 | 1.3 | predicted IS protein (RefSeq) | compare |
| b1672 | ydhW | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b0802 | ybiJ | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b1041 | csgB | +0.5 | 2.2 | curlin nucleator protein, minor subunit in curli complex (NCBI) | compare |
| b1382 | ynbE | +0.5 | 1.1 | predicted lipoprotein (NCBI) | compare |
| b1633 | nth | +0.5 | 2.2 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b3181 | greA | +0.5 | 2.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2699 | recA | +0.5 | 0.7 | recombinase A (NCBI) | compare |
| b1287 | yciW | +0.5 | 2.7 | putative oxidoreductase (VIMSS) | compare |
| b4260 | pepA | +0.5 | 3.7 | leucyl aminopeptidase (NCBI) | compare |
| b1187 | fadR | +0.5 | 2.0 | fatty acid metabolism regulator (NCBI) | compare |
| b2597 | yfiA | +0.5 | 1.4 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b2579 | yfiD | +0.4 | 1.1 | pyruvate formate lyase subunit (NCBI) | compare |
| b4203 | rplI | +0.4 | 2.0 | 50S ribosomal protein L9 (NCBI) | compare |
| b4441 | glmY | +0.4 | 1.3 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b3769 | ilvM | +0.4 | 1.8 | acetolactate synthase II, small subunit (NCBI) | compare |
| b4538 | yoeF | +0.4 | 1.3 | hypothetical protein (RefSeq) | compare |
| b1936 | intG | +0.4 | 0.5 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0505 | allA | +0.4 | 2.0 | ureidoglycolate hydrolase (NCBI) | compare |
| b0852 | rimK | +0.4 | 2.8 | ribosomal protein S6 modification protein (NCBI) | compare |
| b4110 | yjcZ | +0.4 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b2743 | pcm | +0.4 | 2.1 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b4692 | oweE | +0.4 | 1.4 | no description | compare |
| b3775 | ppiC | +0.4 | 2.4 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b1486 | ddpB | +0.4 | 1.7 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1727 | yniC | +0.4 | 1.8 | predicted hydrolase (NCBI) | compare |
| b2421 | cysM | +0.4 | 1.9 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b0921 | smtA | +0.4 | 2.8 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2261 | menC | +0.4 | 2.6 | O-succinylbenzoate synthase (NCBI) | compare |
| b2309 | hisJ | +0.4 | 2.3 | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | compare |
| b1159 | mcrA | +0.4 | 0.7 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b1586 | b1586 | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1863 | ruvC | +0.4 | 1.3 | Holliday junction resolvase (NCBI) | compare |
| b0685 | ybfE | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4217 | ytfK | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1520 | b1520 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4654 | yjdQ | +0.4 | 3.1 | no description | compare |
| b3934 | cytR | +0.4 | 3.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2352 | yfdI | +0.4 | 0.5 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b2765 | ygcM | +0.4 | 1.6 | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | compare |
| b0796 | ybiH | +0.4 | 1.6 | putative transcriptional regulator (VIMSS) | compare |
| b3293 | yhdN | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b1754 | b1754 | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3263 | yhdU | +0.4 | 2.4 | predicted membrane protein (NCBI) | compare |
| b1519 | tam | +0.4 | 2.4 | trans-aconitate 2-methyltransferase (NCBI) | compare |
| b0461 | ybaJ | +0.4 | 2.6 | hypothetical protein (NCBI) | compare |
| b2141 | yohJ | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b2768 | ygcP | +0.4 | 1.2 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b2007 | yeeX | +0.4 | 0.9 | conserved protein (RefSeq) | compare |
| b4416 | rybA | +0.4 | 0.9 | unknown RNA (NCBI) | compare |
| b2446 | yffO | +0.4 | 1.2 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0247 | ykfG | +0.4 | 0.9 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b2564 | pdxJ | +0.4 | 1.8 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b1205 | ychH | +0.4 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b1944 | fliL | +0.4 | 2.0 | flagellar basal body-associated protein FliL (NCBI) | compare |
| b1233 | ychJ | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b1871 | yecP | +0.4 | 1.7 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b4255 | yjgD | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b2125 | yehT | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1920 | fliY | +0.4 | 0.8 | cystine transporter subunit (NCBI) | compare |
| b2534 | yfhR | +0.4 | 2.4 | predicted peptidase (RefSeq) | compare |
| b1396 | paaI | +0.4 | 2.4 | predicted thioesterase (NCBI) | compare |
| b1724 | ydiZ | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b4630 | ykgP | +0.4 | 1.6 | no description | compare |
| b3098 | yqjD | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b4594 | ymgJ | +0.4 | 1.1 | hypothetical protein (RefSeq) | compare |
| b0527 | ybcI | +0.4 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b2481 | hyfA | +0.4 | 2.1 | hydrogenase 4 Fe-S subunit (VIMSS) | compare |
| b1823 | cspC | +0.4 | 0.9 | stress protein, member of the CspA-family (NCBI) | compare |
| b1526 | yneJ | +0.4 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2362 | yfdS | +0.4 | 2.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3935 | priA | +0.4 | 1.0 | primosome assembly protein PriA (NCBI) | compare |
| b1611 | fumC | +0.4 | 1.5 | fumarate hydratase (NCBI) | compare |
| b1279 | yciS | +0.4 | 0.6 | conserved inner membrane protein (NCBI) | compare |
| b1806 | yeaY | +0.3 | 1.8 | predicted lipoprotein (NCBI) | compare |
| b2637 | yfjT | +0.3 | 1.2 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b3484 | yhhI | +0.3 | 1.1 | predicted transposase (NCBI) | compare |
| b2293 | yfbT | +0.3 | 1.2 | putative phosphatase (VIMSS) | compare |
| b1042 | csgA | +0.3 | 2.2 | cryptic curlin major subunit (NCBI) | compare |
| b0785 | moaE | +0.3 | 2.0 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1273 | yciN | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b4536 | yobH | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b2832 | ygdQ | +0.3 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b3199 | yrbK | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b1079 | flgH | +0.3 | 1.7 | flagellar L-ring protein precursor H (NCBI) | compare |
| b0487 | cueR | +0.3 | 1.0 | DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) | compare |
| b4585 | sroB | +0.3 | 0.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b1482 | osmC | +0.3 | 0.7 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0365 | tauA | +0.3 | 2.0 | taurine transport system periplasmic protein (VIMSS) | compare |
| b1186 | nhaB | +0.3 | 2.2 | NhaB sodium/proton transporter (Katherine Huang) | compare |
| b3034 | nudF | +0.3 | 2.2 | ADP-ribose pyrophosphatase (NCBI) | compare |
| b1696 | ydiP | +0.3 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1077 | flgF | +0.3 | 2.1 | flagellar component of cell-proximal portion of basal-body rod (NCBI) | compare |
| b0754 | aroG | +0.3 | 1.9 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) | compare |
| b1777 | b1777 | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1190 | dadX | +0.3 | 1.8 | alanine racemase (NCBI) | compare |
| b0979 | appB | +0.3 | 2.1 | cytochrome bd-II oxidase, subunit II (NCBI) | compare |
| b0729 | sucD | +0.3 | 0.9 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1518 | lsrG | +0.3 | 1.0 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b4656 | yjhY | +0.3 | 2.0 | no description | compare |
| b0742 | ybgF | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b4513 | kdpF | +0.3 | 1.1 | potassium ion accessory transporter subunit (NCBI) | compare |
| b4371 | rsmC | +0.3 | 2.2 | 16S ribosomal RNA m2G1207 methyltransferase (NCBI) | compare |
| b1278 | pgpB | +0.3 | 1.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b4141 | yjeH | +0.3 | 2.6 | predicted transporter (NCBI) | compare |
| b1183 | umuD | +0.3 | 0.6 | DNA polymerase V, subunit D (NCBI) | compare |
| b0618 | citC | +0.3 | 2.0 | citrate lyase synthetase (citrate (pro-3S)-lyase ligase (VIMSS) | compare |
| b1960 | vsr | +0.3 | 0.9 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b1948 | fliP | +0.3 | 2.0 | flagellar biosynthesis protein P (NCBI) | compare |
| b1299 | puuR | +0.3 | 1.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1213 | ychQ | +0.3 | 1.9 | predicted transcriptional regulator (NCBI) | compare |
| b2774 | ygcW | +0.3 | 1.4 | putative oxidoreductase (VIMSS) | compare |
| b1988 | nac | +0.3 | 1.6 | DNA-binding transcriptional dual regulator of nitrogen assimilation (NCBI) | compare |
| b1120 | cobB | +0.3 | 1.7 | deacetylase of acs and cheY, regulates chemotaxis (NCBI) | compare |
| b4212 | ytfH | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2246 | b2246 | +0.3 | 1.8 | putative transport protein (VIMSS) | compare |
| b0357 | yaiN | +0.3 | 0.6 | putative alpha helix chain (VIMSS) | compare |
| b3446 | yrhB | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b4370 | leuQ | +0.3 | 1.0 | tRNA-Leu (NCBI) | compare |
| b2934 | cmtB | +0.3 | 0.4 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b2325 | yfcL | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b4406 | yaeP | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b0643 | ybeL | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b1412 | azoR | +0.3 | 1.4 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b2458 | eutI | +0.3 | 1.6 | predicted phosphotransacetylase subunit (NCBI) | compare |
| b4373 | rimI | +0.3 | 1.5 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1283 | osmB | +0.3 | 1.9 | lipoprotein (NCBI) | compare |
| b4457 | csrC | +0.3 | 1.4 | regulatory RNA (NCBI) | compare |
| b4174 | hflK | +0.3 | 2.2 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b2521 | sseA | +0.3 | 2.5 | putative thiosulfate sulfurtransferase (VIMSS) | compare |
| b4169 | amiB | +0.3 | 2.5 | N-acetylmuramoyl-l-alanine amidase II (NCBI) | compare |
| b0294 | ykgK | +0.3 | 1.3 | predicted regulator (NCBI) | compare |
| b1562 | hokD | +0.3 | 1.1 | Qin prophage; small toxic polypeptide (NCBI) | compare |
| b1656 | sodB | +0.3 | 1.4 | superoxide dismutase, Fe (NCBI) | compare |
| b2436 | hemF | +0.3 | 1.8 | coproporphyrinogen III oxidase (NCBI) | compare |
| b4353 | yjiX | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b4109 | yjdA | +0.3 | 2.4 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b1185 | dsbB | +0.3 | 1.4 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b4135 | yjdC | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2951 | yggS | +0.3 | 1.6 | predicted enzyme (NCBI) | compare |
| b1763 | topB | +0.3 | 0.9 | DNA topoisomerase III (NCBI) | compare |
| b1892 | flhD | +0.3 | 1.4 | DNA-binding transcriptional dual regulator with FlhC (RefSeq) | compare |
| b3977 | tyrU | +0.3 | 0.4 | tRNA-Tyr (NCBI) | compare |
| b2101 | yegW | +0.3 | 1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0775 | bioB | +0.3 | 1.6 | biotin synthase (NCBI) | compare |
| b4293 | fecI | +0.3 | 1.7 | KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) | compare |
| b2730 | hypE | +0.3 | 2.1 | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein (RefSeq) | compare |
| b1111 | ycfQ | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1335 | ogt | +0.3 | 1.3 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |