| | gene | name | fitness | t score | description | |
|---|
| b4246 | pyrL | -4.6 | -3.4 | pyrBI operon leader peptide (NCBI) | compare |
| b1984 | asnW | -4.5 | -1.6 | tRNA-Asn (NCBI) | compare |
| b3742 | mioC | -3.7 | -3.9 | flavodoxin (NCBI) | compare |
| b3341 | rpsG | -3.7 | -2.2 | 30S ribosomal protein S7 (NCBI) | compare |
| b1493 | gadB | -3.5 | -1.2 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1429 | tehA | -3.5 | -2.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1842 | holE | -3.4 | -2.7 | DNA polymerase III, theta subunit (NCBI) | compare |
| b4603 | rseX | -3.3 | -1.1 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2576 | srmB | -2.8 | -4.2 | ATP-dependent RNA helicase (NCBI) | compare |
| b0053 | surA | -2.7 | -4.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3405 | ompR | -2.7 | -4.8 | osmolarity response regulator (NCBI) | compare |
| b0547 | ybcN | -2.6 | -4.5 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3002 | yqhA | -2.5 | -2.3 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | -2.5 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0145 | dksA | -2.5 | -3.0 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1709 | btuD | -2.4 | -1.1 | vitamin B12-transporter ATPase (NCBI) | compare |
| b0739 | tolA | -2.4 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3229 | sspA | -2.4 | -3.3 | stringent starvation protein A (NCBI) | compare |
| b4042 | dgkA | -2.4 | -1.6 | diacylglycerol kinase (NCBI) | compare |
| b2330 | yfcB | -2.4 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b0014 | dnaK | -2.4 | -1.9 | molecular chaperone DnaK (NCBI) | compare |
| b1724 | ydiZ | -2.3 | -2.2 | hypothetical protein (NCBI) | compare |
| b0142 | folK | -2.3 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4151 | frdD | -2.3 | -2.5 | fumarate reductase subunit D (NCBI) | compare |
| b2906 | visC | -2.3 | -5.2 | hypothetical protein (NCBI) | compare |
| b0738 | tolR | -2.3 | -1.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2168 | fruK | -2.2 | -1.8 | 1-phosphofructokinase (NCBI) | compare |
| b1686 | ydiI | -2.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b2188 | yejM | -2.1 | -7.8 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3005 | exbD | -2.1 | -3.3 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b4402 | yjjY | -2.1 | -1.0 | hypothetical protein (NCBI) | compare |
| b4701 | sokX | -2.1 | -1.0 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0584 | fepA | -2.0 | -8.1 | iron-enterobactin outer membrane transporter (NCBI) | compare |
| b1848 | yebG | -2.0 | -1.4 | conserved protein regulated by LexA (NCBI) | compare |
| b1286 | rnb | -2.0 | -2.7 | exoribonuclease II (NCBI) | compare |
| b2620 | smpB | -2.0 | -1.4 | SsrA-binding protein (NCBI) | compare |
| b2804 | fucU | -2.0 | -2.4 | L-fucose mutarotase (NCBI) | compare |
| b3838 | tatB | -2.0 | -6.6 | sec-independent translocase (NCBI) | compare |
| b0660 | ybeZ | -2.0 | -3.4 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |
| b0740 | tolB | -2.0 | -4.5 | translocation protein TolB precursor (NCBI) | compare |
| b1175 | minD | -2.0 | -4.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1358 | ydaT | -2.0 | -1.3 | Rac prophage; predicted protein (NCBI) | compare |
| b3162 | deaD | -2.0 | -5.4 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2912 | ygfA | -2.0 | -3.4 | putative ligase (VIMSS) | compare |
| b3871 | bipA | -2.0 | -7.6 | GTP-binding protein (NCBI) | compare |
| b1086 | rluC | -2.0 | -3.8 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b4178 | yjeB | -1.9 | -4.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1863 | ruvC | -1.9 | -1.3 | Holliday junction resolvase (NCBI) | compare |
| b0082 | mraW | -1.9 | -2.9 | S-adenosyl-methyltransferase (NCBI) | compare |
| b1251 | yciI | -1.9 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b0858 | ybjO | -1.9 | -1.8 | predicted inner membrane protein (NCBI) | compare |
| b3764 | yifE | -1.9 | -3.4 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | -1.9 | -6.4 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0564 | appY | -1.9 | -0.8 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1677 | lpp | -1.8 | -1.8 | murein lipoprotein (NCBI) | compare |
| b3545 | proK | -1.8 | -1.6 | tRNA-Pro (NCBI) | compare |
| b2248 | yfaX | -1.8 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2083 | yegZ | -1.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4515 | ybgT | -1.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b0706 | ybfD | -1.7 | -2.0 | hypothetical protein (NCBI) | compare |
| b3611 | yibN | -1.7 | -3.1 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b1684 | sufA | -1.7 | -1.8 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2830 | nudH | -1.7 | -1.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2058 | wcaB | -1.7 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b3839 | tatC | -1.7 | -5.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4179 | vacB | -1.7 | -5.2 | putative enzyme (VIMSS) | compare |
| b2959 | yggL | -1.6 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | -1.6 | -3.1 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2501 | ppk | -1.6 | -5.1 | polyphosphate kinase (NCBI) | compare |
| b3784 | rfe | -1.6 | -6.0 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1765 | ydjA | -1.6 | -0.8 | predicted oxidoreductase (NCBI) | compare |
| b1550 | b1550 | -1.6 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3529 | yhjK | -1.6 | -8.0 | predicted diguanylate cyclase (RefSeq) | conserved |
| b3613 | yibP | -1.6 | -2.1 | putative membrane protein (VIMSS) | compare |
| b4363 | yjjB | -1.6 | -2.0 | conserved inner membrane protein (RefSeq) | compare |
| b4676 | yoaK | -1.5 | -0.7 | expressed protein (RefSeq) | compare |
| b0263 | afuB | -1.5 | -1.1 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b2314 | dedD | -1.5 | -1.9 | putative lipoprotein (VIMSS) | compare |
| b4596 | yciZ | -1.5 | -1.4 | hypothetical protein (RefSeq) | compare |
| b3021 | ygiT | -1.5 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2567 | rnc | -1.5 | -1.0 | ribonuclease III (NCBI) | compare |
| b4480 | hdfR | -1.5 | -2.7 | transcriptional regulator HdfR (NCBI) | compare |
| b1334 | fnr | -1.5 | -1.9 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0232 | yafN | -1.4 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3181 | greA | -1.4 | -3.2 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b4702 | mgtL | -1.4 | -1.2 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3794 | rffM | -1.4 | -3.4 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3026 | qseC | -1.4 | -2.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0439 | lon | -1.4 | -4.1 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4585 | sroB | -1.4 | -1.1 | Novel sRNA, function unknown (RefSeq) | compare |
| b1476 | fdnI | -1.4 | -0.8 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3006 | exbB | -1.4 | -4.0 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b4460 | araH | -1.4 | -0.9 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1600 | mdtJ | -1.4 | -1.3 | multidrug efflux system transporter (NCBI) | compare |
| b3741 | gidA | -1.3 | -2.7 | glucose-inhibited division protein A (NCBI) | compare |
| b4535 | yniD | -1.3 | -1.2 | predicted protein (RefSeq) | compare |
| b2807 | ygdD | -1.3 | -2.2 | conserved inner membrane protein (NCBI) | compare |
| b0920 | ycbC | -1.3 | -2.8 | conserved inner membrane protein (NCBI) | compare |
| b2506 | yfgI | -1.3 | -2.1 | hypothetical protein (NCBI) | compare |
| b3426 | glpD | -1.3 | -2.6 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b0178 | hlpA | -1.3 | -2.6 | periplasmic chaperone (NCBI) | compare |
| b3785 | wzzE | -1.3 | -6.6 | putative transport protein (VIMSS) | compare |
| b0141 | yadN | -1.3 | -4.7 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3555 | yiaG | -1.3 | -2.0 | predicted transcriptional regulator (NCBI) | compare |
| b3205 | yhbJ | -1.3 | -2.6 | hypothetical protein (NCBI) | compare |
| b1192 | ldcA | -1.3 | -2.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b0736 | ybgC | -1.3 | -2.2 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b2938 | speA | -1.3 | -5.0 | arginine decarboxylase (NCBI) | compare |
| b2444 | yffM | -1.3 | -1.3 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1988 | nac | -1.3 | -2.6 | DNA-binding transcriptional dual regulator of nitrogen assimilation (NCBI) | compare |
| b1269 | rluB | -1.2 | -2.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b1298 | ycjL | -1.2 | -1.8 | probable amidotransferase subunit (VIMSS) | compare |
| b2061 | wzb | -1.2 | -1.5 | protein-tyrosine phosphatase (NCBI) | compare |
| b1860 | ruvB | -1.2 | -0.8 | Holliday junction DNA helicase B (NCBI) | compare |
| b0741 | pal | -1.2 | -2.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1676 | pykF | -1.2 | -2.4 | pyruvate kinase (NCBI) | compare |
| b2617 | smpA | -1.2 | -1.6 | small membrane protein A (VIMSS) | compare |
| b2279 | nuoK | -1.2 | -1.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2754 | ygbF | -1.2 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2319 | usg | -1.2 | -2.1 | hypothetical protein (NCBI) | compare |
| b4697 | yrdF | -1.2 | -2.7 | no description | compare |
| b2937 | speB | -1.2 | -2.8 | agmatinase (NCBI) | compare |
| b3150 | yraP | -1.2 | -3.7 | hypothetical protein (NCBI) | compare |
| b1013 | ycdC | -1.2 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0623 | cspE | -1.2 | -0.8 | cold shock protein E (NCBI) | compare |
| b1355 | b1355 | -1.2 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3791 | rffA | -1.2 | -4.1 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1861 | ruvA | -1.2 | -0.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4146 | yjeK | -1.2 | -1.6 | predicted lysine aminomutase (NCBI) | compare |
| b0678 | nagB | -1.1 | -1.7 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b2603 | yfiR | -1.1 | -3.2 | hypothetical protein (NCBI) | compare |
| b3844 | fre | -1.1 | -2.9 | NAD(P)H-flavin reductase (NCBI) | compare |
| b4685 | yrbN | -1.1 | -2.0 | expressed protein (RefSeq) | compare |
| b4570 | lomR | -1.1 | -1.2 | no description | compare |
| b0888 | trxB | -1.1 | -1.6 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4589 | ylcI | -1.1 | -1.3 | hypothetical protein (RefSeq) | compare |
| b4648 | ysaC | -1.1 | -1.9 | no description | compare |
| b0604 | dsbG | -1.1 | -2.2 | thiol:disulfide interchange protein (VIMSS) | compare |
| b2699 | recA | -1.1 | -0.7 | recombinase A (NCBI) | compare |
| b0001 | thrL | -1.1 | -1.3 | thr operon leader peptide (NCBI) | compare |
| b1109 | ndh | -1.1 | -2.2 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3166 | truB | -1.1 | -2.3 | tRNA pseudouridine synthase B (NCBI) | compare |
| b0161 | degP | -1.1 | -3.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0143 | pcnB | -1.1 | -3.2 | poly(A) polymerase I (VIMSS) | compare |
| b0877 | ybjX | -1.1 | -2.8 | hypothetical protein (NCBI) | compare |
| b1711 | btuC | -1.1 | -2.6 | vtamin B12-transporter permease (NCBI) | compare |
| b2187 | yejL | -1.1 | -1.9 | hypothetical protein (NCBI) | compare |
| b4529 | ydbJ | -1.1 | -0.6 | hypothetical protein (NCBI) | compare |
| b0990 | cspG | -1.1 | -0.7 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1850 | eda | -1.1 | -1.5 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1063 | yceB | -1.0 | -1.1 | predicted lipoprotein (NCBI) | compare |
| b2911 | ssrS | -1.0 | -1.0 | 6S regulatory RNA (NCBI) | compare |
| b0015 | dnaJ | -1.0 | -4.0 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b1028 | ymdE | -1.0 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b4470 | yhaM | -1.0 | -3.4 | hypothetical protein (NCBI) | compare |
| b3261 | fis | -1.0 | -0.7 | DNA-binding protein Fis (NCBI) | compare |
| b3071 | yqjI | -1.0 | -2.2 | predicted transcriptional regulator (NCBI) | compare |
| b0998 | torD | -1.0 | -0.8 | chaperone protein TorD (NCBI) | compare |
| b2457 | cchA | -1.0 | -2.5 | detox protein (VIMSS) | compare |
| b2935 | tktA | -1.0 | -1.0 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1970 | yedX | -1.0 | -2.6 | hypothetical protein (NCBI) | compare |
| b1259 | yciG | -1.0 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2252 | ais | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b2111 | yehD | -1.0 | -1.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1642 | slyA | -1.0 | -1.0 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1663 | mdtK | -1.0 | -3.7 | multidrug efflux protein NorM (NCBI) | compare |
| b3469 | zntA | -1.0 | -3.8 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b1877 | yecT | -1.0 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1948 | fliP | -1.0 | -2.3 | flagellar biosynthesis protein P (NCBI) | compare |
| b3446 | yrhB | -1.0 | -3.5 | hypothetical protein (NCBI) | compare |
| b4631 | ykgQ | -1.0 | -1.1 | no description | compare |
| b0737 | tolQ | -1.0 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4558 | yifL | -1.0 | -2.2 | predicted lipoprotein (NCBI) | compare |
| b1291 | sapD | -1.0 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3979 | thrT | -1.0 | -0.3 | tRNA-Thr (NCBI) | compare |
| b4451 | ryhB | -1.0 | -0.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b1762 | b1762 | -1.0 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1871 | yecP | -0.9 | -1.5 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b1380 | ldhA | -0.9 | -1.2 | D-lactate dehydrogenase (NCBI) | compare |
| b2953 | yggU | -0.9 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1918 | yecS | -0.9 | -0.7 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3811 | xerC | -0.9 | -1.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3628 | rfaB | -0.9 | -4.8 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b1731 | cedA | -0.9 | -2.1 | cell division modulator (RefSeq) | compare |
| b1332 | ynaJ | -0.9 | -0.4 | predicted inner membrane protein (NCBI) | compare |
| b0436 | tig | -0.9 | -2.5 | trigger factor (NCBI) | compare |
| b0450 | glnK | -0.9 | -1.5 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1085 | b1085 | -0.9 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1607 | ydgC | -0.9 | -0.6 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2114 | metG | -0.9 | -1.2 | methionyl-tRNA synthetase (NCBI) | compare |
| b1176 | minC | -0.9 | -1.9 | septum formation inhibitor (NCBI) | compare |
| b4593 | ymgI | -0.9 | -0.6 | hypothetical protein (RefSeq) | compare |
| b2572 | rseA | -0.9 | -2.3 | anti-sigma factor (NCBI) | compare |
| b1698 | ydiR | -0.9 | -2.1 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b0300 | ykgA | -0.9 | -1.9 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b3933 | ftsN | -0.9 | -3.4 | essential cell division protein (NCBI) | compare |
| b1482 | osmC | -0.9 | -1.3 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3024 | ygiW | -0.9 | -1.9 | hypothetical protein (NCBI) | compare |
| b3169 | nusA | -0.9 | -1.3 | transcription elongation factor NusA (NCBI) | compare |
| b3500 | gor | -0.9 | -1.0 | glutathione reductase (NCBI) | compare |