Experiment set65S21 for Escherichia coli BW25113
Ste41
Group: phageMedia: LB_plus_SM_buffer + MOI 10
Culturing: Keio_ML9a, 48 well microplate, Aerobic, at 37 (C), shaken=double orbital, continuous, 205cpm
By: Lucas on 4/1/24
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride
Specific Phenotypes
For 13 genes in this experiment
For phage MOI 10 in Escherichia coli BW25113
For phage MOI 10 across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Iron acquisition in Vibrio | 1 |
| LOS core oligosaccharide biosynthesis | 1 |
| Menaquinone and Phylloquinone Biosynthesis | 1 |
| Nitrate and nitrite ammonification | 1 |
| Siderophore Aerobactin | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Pentose phosphate pathway
- Ubiquinone and menaquinone biosynthesis
- Lipopolysaccharide biosynthesis
- Nicotinate and nicotinamide metabolism
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: