| | gene | name | fitness | t score | description | |
|---|
| b0912 | ihfB | -5.2 | -3.6 | integration host factor subunit beta (NCBI) | compare |
| b0685 | ybfE | -5.1 | -3.5 | orf, hypothetical protein (VIMSS) | compare |
| b0015 | dnaJ | -4.3 | -5.2 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3149 | yraO | -4.2 | -5.7 | DnaA initiator-associating factor for replication initiation (NCBI) | conserved |
| b0393 | rdgC | -4.1 | -8.3 | recombination associated protein (NCBI) | conserved |
| b2314 | dedD | -4.0 | -3.9 | putative lipoprotein (VIMSS) | compare |
| b0019 | nhaA | -4.0 | -4.7 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b2678 | proW | -3.8 | -6.3 | glycine betaine transporter subunit (NCBI) | compare |
| b3387 | dam | -3.8 | -2.6 | DNA adenine methylase (NCBI) | compare |
| b1176 | minC | -3.7 | -2.6 | septum formation inhibitor (NCBI) | compare |
| b4032 | malG | -3.7 | -7.4 | maltose transporter subunit (NCBI) | conserved |
| b1334 | fnr | -3.5 | -2.4 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0032 | carA | -3.5 | -4.8 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b4033 | malF | -3.5 | -9.1 | maltose transporter subunit (NCBI) | conserved |
| b1085 | b1085 | -3.5 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -3.4 | -3.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0440 | hupB | -3.4 | -4.1 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b4000 | hupA | -3.4 | -4.6 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b2679 | proX | -3.4 | -4.0 | glycine betaine transporter subunit (NCBI) | compare |
| b4201 | priB | -3.2 | -2.2 | primosomal replication protein N (NCBI) | compare |
| b2904 | gcvH | -3.2 | -2.8 | glycine cleavage system protein H (NCBI) | compare |
| b2531 | iscR | -3.1 | -2.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1062 | pyrC | -3.1 | -4.8 | dihydroorotase (NCBI) | compare |
| b1493 | gadB | -3.1 | -1.5 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b4245 | pyrB | -3.1 | -7.9 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b3642 | pyrE | -3.1 | -3.0 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3021 | ygiT | -3.0 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0438 | clpX | -3.0 | -2.1 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3781 | trxA | -3.0 | -2.9 | thioredoxin 1 (VIMSS) | compare |
| b0888 | trxB | -2.9 | -2.0 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3813 | uvrD | -2.9 | -12.4 | DNA-dependent ATPase I and helicase II (NCBI) | conserved |
| b2017 | yefM | -2.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -2.9 | -1.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0033 | carB | -2.8 | -10.7 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b1231 | tyrT | -2.8 | -1.4 | tRNA-Tyr (NCBI) | compare |
| b3838 | tatB | -2.8 | -7.0 | sec-independent translocase (NCBI) | compare |
| b4699 | fnrS | -2.8 | -1.3 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b0437 | clpP | -2.8 | -1.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3973 | birA | -2.7 | -3.0 | biotin--protein ligase (NCBI) | compare |
| b1175 | minD | -2.7 | -4.2 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1248 | b1248 | -2.7 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3164 | pnp | -2.7 | -1.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1594 | dgsA | -2.7 | -1.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1850 | eda | -2.7 | -1.8 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1095 | fabF | -2.7 | -7.4 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b2597 | yfiA | -2.6 | -1.8 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b3405 | ompR | -2.6 | -1.8 | osmolarity response regulator (NCBI) | compare |
| b2388 | glk | -2.6 | -5.6 | glucokinase (NCBI) | compare |
| b1109 | ndh | -2.6 | -3.1 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b4045 | yjbJ | -2.6 | -2.5 | predicted stress response protein (NCBI) | compare |
| b3778 | rep | -2.5 | -2.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3414 | gntY | -2.5 | -3.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b2677 | proV | -2.5 | -8.3 | glycine betaine transporter subunit (NCBI) | conserved |
| b3652 | recG | -2.5 | -5.5 | ATP-dependent DNA helicase (NCBI) | compare |
| b3017 | sufI | -2.5 | -8.3 | repressor protein for FtsI (NCBI) | compare |
| b3844 | fre | -2.5 | -3.7 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0945 | pyrD | -2.4 | -4.4 | dihydroorotate dehydrogenase (NCBI) | compare |
| b0741 | pal | -2.4 | -2.3 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1217 | chaB | -2.4 | -1.6 | cation transport regulator (NCBI) | compare |
| b0740 | tolB | -2.3 | -2.3 | translocation protein TolB precursor (NCBI) | compare |
| b1192 | ldcA | -2.3 | -4.7 | L,D-carboxypeptidase A (NCBI) | compare |
| b0937 | ssuE | -2.3 | -1.8 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b2895 | fldB | -2.3 | -2.9 | flavodoxin 2 (NCBI) | compare |
| b0386 | proC | -2.3 | -3.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4203 | rplI | -2.3 | -3.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b0082 | mraW | -2.3 | -3.1 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4234 | yjgA | -2.3 | -3.9 | hypothetical protein (NCBI) | compare |
| b2501 | ppk | -2.2 | -6.4 | polyphosphate kinase (NCBI) | compare |
| b2954 | yggV | -2.2 | -4.4 | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | compare |
| b0853 | ybjN | -2.2 | -4.4 | predicted oxidoreductase (NCBI) | compare |
| b3613 | yibP | -2.1 | -2.1 | putative membrane protein (VIMSS) | compare |
| b1804 | rnd | -2.1 | -3.5 | ribonuclease D (NCBI) | compare |
| b3636 | rpmG | -2.1 | -1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b1863 | ruvC | -2.1 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b0806 | ybiM | -2.1 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0471 | ybaB | -2.0 | -2.4 | hypothetical protein (NCBI) | compare |
| b4414 | tff | -2.0 | -3.0 | unknown RNA (NCBI) | compare |
| b1658 | purR | -2.0 | -3.9 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2435 | amiA | -2.0 | -3.6 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0053 | surA | -2.0 | -1.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2796 | sdaC | -2.0 | -9.5 | predicted serine transporter (NCBI) | conserved |
| b1438 | ydcQ | -2.0 | -2.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1992 | cobS | -1.9 | -1.7 | cobalamin synthase (NCBI) | compare |
| b0439 | lon | -1.9 | -1.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4410 | ecnA | -1.9 | -1.3 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b3180 | yhbY | -1.9 | -2.8 | predicted RNA-binding protein (NCBI) | conserved |
| b2276 | nuoN | -1.8 | -2.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b2363 | yfdT | -1.8 | -1.3 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2673 | nrdH | -1.8 | -2.2 | glutaredoxin-like protein (NCBI) | compare |
| b0746 | valZ | -1.8 | -1.5 | tRNA-Val (NCBI) | compare |
| b3792 | wzxE | -1.8 | -4.6 | O-antigen translocase (NCBI) | compare |
| b2377 | yfdY | -1.8 | -2.4 | predicted inner membrane protein (NCBI) | compare |
| b1842 | holE | -1.8 | -1.7 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0739 | tolA | -1.8 | -2.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1359 | ydaU | -1.8 | -3.1 | Rac prophage; conserved protein (NCBI) | compare |
| b3162 | deaD | -1.8 | -1.2 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3871 | bipA | -1.8 | -7.2 | GTP-binding protein (NCBI) | compare |
| b1355 | b1355 | -1.7 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2506 | yfgI | -1.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b2909 | ygfB | -1.7 | -5.1 | orf, hypothetical protein (VIMSS) | compare |
| b3250 | mreC | -1.7 | -1.8 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1874 | cutC | -1.7 | -2.0 | copper homeostasis protein (NCBI) | compare |
| b2281 | nuoI | -1.7 | -1.6 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.8 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b4577 | sgrS | -1.7 | -1.8 | small antisense RNA (NCBI) | compare |
| b1514 | lsrC | -1.7 | -1.6 | AI2 transporter (NCBI) | compare |
| b0767 | ybhE | -1.7 | -3.2 | 6-phosphogluconolactonase (NCBI) | compare |
| b3183 | obgE | -1.7 | -1.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0183 | rnhB | -1.6 | -2.8 | ribonuclease HII (NCBI) | compare |
| b3933 | ftsN | -1.6 | -7.2 | essential cell division protein (NCBI) | compare |
| b0406 | tgt | -1.6 | -4.9 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3341 | rpsG | -1.6 | -1.1 | 30S ribosomal protein S7 (NCBI) | compare |
| b3425 | glpE | -1.6 | -6.2 | thiosulfate sulfurtransferase (NCBI) | compare |
| b4246 | pyrL | -1.6 | -1.5 | pyrBI operon leader peptide (NCBI) | compare |
| b0737 | tolQ | -1.6 | -2.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1949 | fliQ | -1.6 | -1.6 | flagellar biosynthesis protein Q (NCBI) | compare |
| b4413 | sokC | -1.6 | -1.3 | regulatory antisense RNA (NCBI) | compare |
| b2910 | zapA | -1.6 | -3.5 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b4685 | yrbN | -1.6 | -1.5 | expressed protein (RefSeq) | compare |
| b1103 | ycfF | -1.6 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2569 | lepA | -1.6 | -2.1 | GTP-binding protein LepA (NCBI) | compare |
| b0142 | folK | -1.5 | -0.7 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1676 | pykF | -1.5 | -2.7 | pyruvate kinase (NCBI) | compare |
| b4222 | ytfP | -1.5 | -3.6 | hypothetical protein (NCBI) | compare |
| b2236 | yfaE | -1.5 | -2.5 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b3836 | b3836 | -1.5 | -3.4 | orf, hypothetical protein (VIMSS) | compare |
| b2906 | visC | -1.5 | -4.0 | hypothetical protein (NCBI) | compare |
| b2518 | ndk | -1.5 | -1.8 | nucleoside diphosphate kinase (NCBI) | compare |
| b3780 | rhlB | -1.5 | -7.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b1134 | ymfB | -1.5 | -2.0 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b1281 | pyrF | -1.5 | -1.9 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b2156 | lysP | -1.5 | -6.3 | lysine transporter (NCBI) | compare |
| b4538 | yoeF | -1.5 | -1.4 | hypothetical protein (RefSeq) | compare |
| b2911 | ssrS | -1.5 | -1.2 | 6S regulatory RNA (NCBI) | compare |
| b1836 | yebV | -1.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4426 | isrA | -1.5 | -1.6 | unknown RNA (NCBI) | compare |
| b1918 | yecS | -1.5 | -2.4 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2797 | sdaB | -1.5 | -7.5 | L-serine deaminase II (NCBI) | conserved |
| b2248 | yfaX | -1.5 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0580 | ybdJ | -1.4 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b1362 | rzpR | -1.4 | -1.8 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b0143 | pcnB | -1.4 | -3.9 | poly(A) polymerase I (VIMSS) | compare |
| b1650 | nemA | -1.4 | -2.8 | N-ethylmaleimide reductase, FMN-linked (NCBI) | compare |
| b1070 | flgN | -1.4 | -1.2 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b0357 | yaiN | -1.4 | -0.8 | putative alpha helix chain (VIMSS) | compare |
| b3404 | envZ | -1.4 | -6.2 | osmolarity sensor protein (NCBI) | compare |
| b4402 | yjjY | -1.4 | -0.9 | hypothetical protein (NCBI) | compare |
| b1286 | rnb | -1.4 | -1.9 | exoribonuclease II (NCBI) | compare |
| b2576 | srmB | -1.4 | -1.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b1305 | pspB | -1.4 | -1.3 | phage shock protein B (NCBI) | compare |
| b4041 | plsB | -1.4 | -1.3 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1861 | ruvA | -1.4 | -0.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2892 | recJ | -1.4 | -4.8 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b1480 | sra | -1.3 | -1.3 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b2905 | gcvT | -1.3 | -4.3 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b2215 | ompC | -1.3 | -4.8 | outer membrane porin protein C (NCBI) | compare |
| b1506 | yneL | -1.3 | -0.9 | predicted transcriptional regulator (NCBI) | compare |
| b1486 | ddpB | -1.3 | -1.7 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b2688 | gshA | -1.3 | -4.2 | glutamate--cysteine ligase (NCBI) | compare |
| b1865 | nudB | -1.3 | -1.3 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3935 | priA | -1.3 | -2.1 | primosome assembly protein PriA (NCBI) | compare |
| b2447 | yffP | -1.3 | -1.6 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b3388 | damX | -1.3 | -6.6 | hypothetical protein (NCBI) | compare |
| b1696 | ydiP | -1.3 | -0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4631 | ykgQ | -1.3 | -0.9 | no description | compare |
| b3106 | yhaK | -1.3 | -3.1 | predicted pirin-related protein (NCBI) | compare |
| b2283 | nuoG | -1.3 | -3.0 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3146 | yraL | -1.3 | -3.8 | predicted methyltransferase (NCBI) | compare |
| b3238 | yhcN | -1.3 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3416 | malQ | -1.3 | -6.6 | 4-alpha-glucanotransferase (amylomaltase) (NCBI) | compare |
| b0623 | cspE | -1.3 | -1.1 | cold shock protein E (NCBI) | compare |
| b1531 | marA | -1.3 | -1.9 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1640 | ydhH | -1.2 | -2.1 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b4431 | rprA | -1.2 | -1.2 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b1269 | rluB | -1.2 | -1.9 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b0738 | tolR | -1.2 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3417 | malP | -1.2 | -6.1 | maltodextrin phosphorylase (NCBI) | compare |
| b4101 | phnG | -1.2 | -2.2 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b0955 | ycbZ | -1.2 | -3.3 | predicted peptidase (NCBI) | compare |
| b1105 | ycfM | -1.2 | -2.5 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0149 | mrcB | -1.2 | -7.5 | penicillin-binding protein 1b (NCBI) | compare |
| b3928 | yiiU | -1.2 | -3.7 | hypothetical protein (NCBI) | compare |
| b1686 | ydiI | -1.2 | -1.4 | hypothetical protein (NCBI) | compare |
| b3026 | qseC | -1.2 | -1.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2532 | yfhQ | -1.2 | -2.4 | predicted methyltransferase (NCBI) | compare |
| b3816 | corA | -1.2 | -4.8 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b2617 | smpA | -1.2 | -1.8 | small membrane protein A (VIMSS) | compare |
| b0212 | gloB | -1.2 | -1.9 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b4701 | sokX | -1.2 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2476 | purC | -1.2 | -1.7 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b0921 | smtA | -1.2 | -3.8 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2939 | yqgB | -1.2 | -1.1 | predicted protein (RefSeq) | compare |
| b3616 | tdh | -1.2 | -3.3 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b2286 | nuoC | -1.2 | -2.4 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1400 | paaY | -1.2 | -1.6 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b1084 | rne | -1.2 | -2.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b0014 | dnaK | -1.2 | -1.3 | molecular chaperone DnaK (NCBI) | compare |
| b2614 | grpE | -1.2 | -1.5 | heat shock protein (NCBI) | compare |
| b3199 | yrbK | -1.1 | -1.9 | hypothetical protein (NCBI) | compare |
| b1482 | osmC | -1.1 | -1.0 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |