| | gene | name | fitness | t score | description | |
|---|
| b4313 | fimE | +2.3 | 16.3 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1183 | umuD | +1.2 | 2.5 | DNA polymerase V, subunit D (NCBI) | compare |
| b1434 | ydcN | +1.2 | 3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1837 | yebW | +0.9 | 3.6 | orf, hypothetical protein (VIMSS) | compare |
| b1575 | dicB | +0.8 | 1.3 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1563 | relE | +0.8 | 2.9 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1984 | asnW | +0.8 | 1.4 | tRNA-Asn (NCBI) | compare |
| b0707 | ybgA | +0.8 | 2.1 | hypothetical protein (NCBI) | compare |
| b0142 | folK | +0.8 | 0.7 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2579 | yfiD | +0.8 | 1.9 | pyruvate formate lyase subunit (NCBI) | compare |
| b1963 | b1963 | +0.8 | 4.0 | orf, hypothetical protein (VIMSS) | compare |
| b1348 | lar | +0.8 | 1.7 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4545 | ypdJ | +0.8 | 1.6 | no description | compare |
| b1954 | dsrA | +0.8 | 1.7 | regulatory antisense RNA (NCBI) | compare |
| b1502 | ydeQ | +0.8 | 2.4 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1644 | b1644 | +0.8 | 3.6 | putative membrane protein (VIMSS) | compare |
| b1380 | ldhA | +0.7 | 2.9 | D-lactate dehydrogenase (NCBI) | compare |
| b0806 | ybiM | +0.7 | 3.4 | orf, hypothetical protein (VIMSS) | compare |
| b1347 | ydaC | +0.7 | 0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b2110 | yehC | +0.7 | 1.5 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b4520 | ymgF | +0.7 | 1.6 | hypothetical protein (NCBI) | compare |
| b0564 | appY | +0.7 | 1.0 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1160 | elbA | +0.7 | 1.1 | hypothetical protein (NCBI) | compare |
| b4045 | yjbJ | +0.7 | 2.2 | predicted stress response protein (NCBI) | compare |
| b1684 | sufA | +0.7 | 2.2 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b1423 | ydcJ | +0.7 | 3.5 | hypothetical protein (NCBI) | compare |
| b4435 | isrC | +0.7 | 1.7 | unknown RNA (NCBI) | compare |
| b4676 | yoaK | +0.7 | 0.5 | expressed protein (RefSeq) | compare |
| b3961 | oxyR | +0.7 | 4.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1533 | ydeD | +0.7 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0937 | ssuE | +0.7 | 1.7 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b1712 | ihfA | +0.6 | 1.3 | integration host factor subunit alpha (NCBI) | compare |
| b0920 | ycbC | +0.6 | 4.1 | conserved inner membrane protein (NCBI) | compare |
| b1696 | ydiP | +0.6 | 2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1795 | yeaQ | +0.6 | 2.2 | conserved inner membrane protein (NCBI) | compare |
| b4704 | arrS | +0.6 | 0.3 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b0389 | yaiA | +0.6 | 1.9 | hypothetical protein (NCBI) | compare |
| b1482 | osmC | +0.6 | 1.5 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1973 | yodA | +0.6 | 2.3 | conserved metal-binding protein (NCBI) | compare |
| b1823 | cspC | +0.6 | 1.4 | stress protein, member of the CspA-family (NCBI) | compare |
| b1999 | yeeP | +0.6 | 2.7 | putative histone (VIMSS) | compare |
| b4650 | yibS | +0.6 | 2.0 | no description | compare |
| b1063 | yceB | +0.6 | 1.7 | predicted lipoprotein (NCBI) | compare |
| b0843 | ybjH | +0.6 | 1.6 | hypothetical protein (NCBI) | compare |
| b1147 | ymfL | +0.6 | 1.7 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4215 | ytfI | +0.6 | 1.4 | hypothetical protein (NCBI) | compare |
| b2782 | chpA | +0.5 | 2.9 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b2939 | yqgB | +0.5 | 1.2 | predicted protein (RefSeq) | compare |
| b4513 | kdpF | +0.5 | 0.8 | potassium ion accessory transporter subunit (NCBI) | compare |
| b1060 | yceP | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2831 | mutH | +0.5 | 1.6 | DNA mismatch repair protein (NCBI) | compare |
| b1346 | ydaQ | +0.5 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2638 | yfjU | +0.5 | 2.6 | CP4-57 prophage; conserved protein (RefSeq) | compare |
| b2300 | yfcE | +0.5 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1486 | ddpB | +0.5 | 1.3 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b2998 | yghW | +0.5 | 2.1 | hypothetical protein (NCBI) | compare |
| b2818 | argA | +0.5 | 3.1 | N-acetylglutamate synthase (NCBI) | compare |
| b1917 | yecC | +0.5 | 2.4 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4209 | ytfE | +0.5 | 2.4 | predicted regulator of cell morphogenesis and cell wall metabolism (NCBI) | compare |
| b1772 | b1772 | +0.5 | 2.2 | putative kinase (VIMSS) | compare |
| b0976 | hyaE | +0.5 | 1.5 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b1344 | ydaO | +0.5 | 1.8 | predicted C32 tRNA thiolase (NCBI) | compare |
| b0001 | thrL | +0.5 | 1.7 | thr operon leader peptide (NCBI) | compare |
| b1251 | yciI | +0.5 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4184 | yjfL | +0.5 | 2.4 | conserved inner membrane protein (NCBI) | compare |
| b1843 | yobB | +0.5 | 2.6 | hypothetical protein (NCBI) | compare |
| b1525 | b1525 | +0.5 | 2.2 | putative aldehyde dehydrogenase (VIMSS) | compare |
| b4527 | b1354 | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1377 | ompN | +0.5 | 2.7 | outer membrane pore protein N, non-specific (NCBI) | compare |
| b2229 | b2229 | +0.5 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1177 | ycgJ | +0.5 | 2.3 | hypothetical protein (NCBI) | compare |
| b1597 | asr | +0.5 | 1.7 | acid shock protein (VIMSS) | compare |
| b1233 | ychJ | +0.5 | 2.1 | hypothetical protein (NCBI) | compare |
| b0559 | ybcW | +0.4 | 2.8 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1869 | yecN | +0.4 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b0791 | ybhQ | +0.4 | 1.8 | predicted inner membrane protein (NCBI) | compare |
| b4508 | peaD | +0.4 | 0.9 | putative sensory transduction regulator (VIMSS) | compare |
| b2376 | ypdI | +0.4 | 1.8 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b1542 | ydfI | +0.4 | 2.2 | predicted mannonate dehydrogenase (NCBI) | compare |
| b1550 | b1550 | +0.4 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1456 | rhsE | +0.4 | 3.0 | rhsE element core protein RshE (RefSeq) | compare |
| b1258 | yciF | +0.4 | 0.6 | hypothetical protein (NCBI) | compare |
| b1444 | ydcW | +0.4 | 1.9 | medium chain aldehyde dehydrogenase (NCBI) | compare |
| b1664 | ydhQ | +0.4 | 2.4 | hypothetical protein (NCBI) | compare |
| b4594 | ymgJ | +0.4 | 1.3 | hypothetical protein (RefSeq) | compare |
| b4577 | sgrS | +0.4 | 1.1 | small antisense RNA (NCBI) | compare |
| b4224 | chpS | +0.4 | 1.9 | suppressor of inhibitory function of ChpB, PemI-like, autoregulated (VIMSS) | compare |
| b4697 | yrdF | +0.4 | 1.7 | no description | compare |
| b2456 | cchB | +0.4 | 1.2 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b2424 | cysU | +0.4 | 1.8 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b1103 | ycfF | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2532 | yfhQ | +0.4 | 1.5 | predicted methyltransferase (NCBI) | compare |
| b0178 | hlpA | +0.4 | 1.7 | periplasmic chaperone (NCBI) | compare |
| b1010 | ycdK | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b3360 | pabA | +0.4 | 2.5 | para-aminobenzoate synthase component II (NCBI) | compare |
| b2104 | thiM | +0.4 | 1.8 | hydroxyethylthiazole kinase (NCBI) | compare |
| b1776 | ydjL | +0.4 | 2.0 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b1335 | ogt | +0.4 | 1.7 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b1635 | gst | +0.4 | 1.5 | glutathionine S-transferase (NCBI) | compare |
| b1218 | chaC | +0.4 | 2.1 | regulatory protein for cation transport (RefSeq) | compare |
| b4582 | yoeA | +0.4 | 1.9 | no description | compare |
| b4163 | glyV | +0.4 | 0.7 | tRNA-Gly (NCBI) | compare |
| b1839 | yebY | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b0623 | cspE | +0.4 | 1.2 | cold shock protein E (NCBI) | compare |
| b1667 | ydhR | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b0530 | sfmA | +0.4 | 1.5 | putative fimbrial-like protein (VIMSS) | compare |
| b1921 | fliZ | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2145 | yeiS | +0.4 | 1.6 | predicted inner membrane protein (NCBI) | compare |
| b1271 | yciK | +0.4 | 1.4 | short chain dehydrogenase (NCBI) | compare |
| b1476 | fdnI | +0.4 | 0.5 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0611 | rna | +0.4 | 2.2 | ribonuclease I (NCBI) | compare |
| b1636 | pdxY | +0.4 | 1.6 | pyridoxine kinase (NCBI) | compare |
| b2960 | yggH | +0.4 | 2.4 | tRNA(m7G46)-methyltransferase (NCBI) | compare |
| b1313 | ycjQ | +0.4 | 2.2 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b2198 | ccmD | +0.4 | 0.9 | cytochrome c biogenesis protein (NCBI) | compare |
| b2734 | pphB | +0.4 | 1.7 | serine/threonine-specific protein phosphatase 2 (NCBI) | compare |
| b2409 | yfeR | +0.4 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0946 | ycbW | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4373 | rimI | +0.4 | 1.0 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b4030 | yjbA | +0.4 | 1.9 | phosphate-starvation-inducible protein PsiE (NCBI) | compare |
| b1708 | nlpC | +0.4 | 1.4 | predicted lipoprotein (NCBI) | compare |
| b1216 | chaA | +0.4 | 2.3 | calcium/sodium:proton antiporter (NCBI) | compare |
| b2398 | yfeC | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1556 | b1556 | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2704 | srlB | +0.3 | 0.9 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0101 | yacG | +0.3 | 1.0 | zinc-binding protein (NCBI) | compare |
| b1481 | b1481 | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3761 | trpT | +0.3 | 0.7 | tRNA-Trp (NCBI) | compare |
| b4589 | ylcI | +0.3 | 0.7 | hypothetical protein (RefSeq) | compare |
| b4694 | yagP | +0.3 | 1.6 | no description | compare |
| b0527 | ybcI | +0.3 | 1.6 | conserved inner membrane protein (NCBI) | compare |
| b1358 | ydaT | +0.3 | 0.6 | Rac prophage; predicted protein (NCBI) | compare |
| b1791 | yeaN | +0.3 | 2.3 | predicted transporter (NCBI) | compare |
| b2488 | hyfH | +0.3 | 2.0 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b0655 | gltI | +0.3 | 1.8 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b3890 | yiiF | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0337 | codA | +0.3 | 2.0 | cytosine deaminase (NCBI) | compare |
| b2250 | b2250 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4068 | yjcH | +0.3 | 1.6 | required for glycolate transport, with actP (from data) | compare |
| b4646 | yrdE | +0.3 | 1.0 | no description | compare |
| b2846 | yqeH | +0.3 | 0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1072 | flgA | +0.3 | 1.7 | flagellar basal body P-ring biosynthesis protein A (NCBI) | compare |
| b1322 | ycjF | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b1900 | araG | +0.3 | 1.4 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1949 | fliQ | +0.3 | 0.9 | flagellar biosynthesis protein Q (NCBI) | compare |
| b0851 | nfsA | +0.3 | 1.8 | nitroreductase A, NADPH-dependent, FMN-dependent (NCBI) | compare |
| b2132 | bglX | +0.3 | 2.3 | beta-D-glucoside glucohydrolase, periplasmic (NCBI) | compare |
| b0850 | ybjC | +0.3 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b2092 | gatC | +0.3 | 1.8 | galactitol-specific enzyme IIC component of PTS (NCBI) | compare |
| b4400 | creD | +0.3 | 2.3 | inner membrane protein (NCBI) | compare |
| b2433 | b2433 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1278 | pgpB | +0.3 | 1.0 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b0752 | zitB | +0.3 | 1.7 | zinc transporter ZitB (NCBI) | compare |
| b4458 | oxyS | +0.3 | 0.6 | global regulatory RNA (NCBI) | compare |
| b2174 | b2174 | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1811 | yoaH | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b1953 | b1953 | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b2123 | yehR | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0951 | pqiB | +0.3 | 2.4 | paraquat-inducible protein B (NCBI) | compare |
| b2548 | yphF | +0.3 | 2.4 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b2481 | hyfA | +0.3 | 1.1 | hydrogenase 4 Fe-S subunit (VIMSS) | compare |
| b4294 | insA-7 | +0.3 | 0.9 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b3875 | ompL | +0.3 | 1.1 | predicted outer membrane porin L (NCBI) | compare |
| b0601 | ybdM | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b3959 | argB | +0.3 | 2.0 | acetylglutamate kinase (RefSeq) | compare |
| b1584 | speG | +0.3 | 1.9 | spermidine N1-acetyltransferase (NCBI) | compare |
| b0814 | ompX | +0.3 | 1.6 | outer membrane protein X (NCBI) | compare |
| b1144 | ymfJ | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1726 | yniB | +0.3 | 0.8 | predicted inner membrane protein (NCBI) | compare |
| b3995 | rsd | +0.3 | 1.5 | stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) | compare |
| b2428 | yfeU | +0.3 | 1.9 | N-acetylmuramic acid-6-phosphate etherase (NCBI) | compare |
| b3964 | yijD | +0.3 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b1920 | fliY | +0.3 | 1.0 | cystine transporter subunit (NCBI) | compare |
| b2844 | yqeF | +0.3 | 2.0 | putative acyltransferase (VIMSS) | compare |
| b1659 | ydhB | +0.3 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3858 | yihD | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b2358 | oweS | +0.3 | 2.0 | CPS-53 (KpLE1) prophage; predicted defective phage replication protein O (RefSeq) | compare |
| b1012 | b1012 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0788 | ybhN | +0.3 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b2840 | ygeA | +0.3 | 1.8 | predicted racemase (NCBI) | compare |
| b3973 | birA | +0.3 | 1.1 | biotin--protein ligase (NCBI) | compare |
| b1539 | ydfG | +0.3 | 1.0 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b3113 | yhaR | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2912 | ygfA | +0.3 | 1.1 | putative ligase (VIMSS) | compare |
| b1831 | proQ | +0.3 | 0.8 | putative solute/DNA competence effector (NCBI) | compare |
| b1730 | ydjO | +0.3 | 0.4 | predicted protein (RefSeq) | compare |
| b1672 | ydhW | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b3449 | ugpQ | +0.3 | 2.0 | cytoplasmic glycerophosphodiester phosphodiesterase (NCBI) | compare |
| b0346 | mhpR | +0.3 | 1.4 | DNA-binding transcriptional activator, 3HPP-binding (RefSeq) | compare |
| b1660 | ydhC | +0.3 | 1.3 | predicted transporter (NCBI) | compare |
| b3622 | rfaL | +0.3 | 1.2 | O-antigen ligase (NCBI) | compare |
| b2299 | yfcD | +0.3 | 1.4 | predicted NUDIX hydrolase (NCBI) | compare |
| b2082 | ogrK | +0.3 | 0.7 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b4571 | wbbL | +0.3 | 1.2 | no description | compare |
| b3780 | rhlB | +0.3 | 2.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b0367 | tauC | +0.3 | 1.3 | taurine transporter subunit (NCBI) | compare |
| b1577 | ydfE | +0.3 | 1.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b4538 | yoeF | +0.3 | 0.7 | hypothetical protein (RefSeq) | compare |
| b2919 | ygfG | +0.3 | 1.1 | putative enzyme (VIMSS) | compare |
| b2044 | wcaL | +0.3 | 1.8 | predicted glycosyl transferase (NCBI) | compare |