| | gene | name | fitness | t score | description | |
|---|
| b0920 | ycbC | -4.9 | -11.1 | conserved inner membrane protein (NCBI) | compare |
| b3871 | bipA | -3.7 | -16.7 | GTP-binding protein (NCBI) | compare |
| b3162 | deaD | -3.4 | -8.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3390 | aroK | -3.0 | -3.5 | shikimate kinase I (NCBI) | compare |
| b1187 | fadR | -2.9 | -2.9 | fatty acid metabolism regulator (NCBI) | compare |
| b0200 | gmhB | -2.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b3183 | obgE | -2.6 | -2.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0888 | trxB | -2.5 | -6.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0051 | ksgA | -2.4 | -7.6 | dimethyladenosine transferase (NCBI) | compare |
| b4593 | ymgI | -2.3 | -1.5 | hypothetical protein (RefSeq) | compare |
| b2330 | yfcB | -2.0 | -1.9 | putative adenine-specific methylase (VIMSS) | compare |
| b3204 | ptsN | -2.0 | -7.3 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2576 | srmB | -1.9 | -4.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b3493 | pitA | -1.9 | -10.0 | phosphate transporter, low-affinity (NCBI) | compare |
| b1863 | ruvC | -1.9 | -3.1 | Holliday junction resolvase (NCBI) | compare |
| b4234 | yjgA | -1.8 | -4.6 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -1.8 | -7.5 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1291 | sapD | -1.7 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3261 | fis | -1.7 | -2.5 | DNA-binding protein Fis (NCBI) | compare |
| b4375 | prfC | -1.7 | -2.3 | peptide chain release factor 3 (NCBI) | compare |
| b3636 | rpmG | -1.7 | -3.1 | 50S ribosomal protein L33 (NCBI) | compare |
| b2935 | tktA | -1.7 | -3.2 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2501 | ppk | -1.7 | -9.4 | polyphosphate kinase (NCBI) | compare |
| b2912 | ygfA | -1.7 | -4.9 | putative ligase (VIMSS) | compare |
| b3613 | yibP | -1.6 | -2.7 | putative membrane protein (VIMSS) | compare |
| b2567 | rnc | -1.6 | -1.1 | ribonuclease III (NCBI) | compare |
| b3290 | trkA | -1.6 | -2.3 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3781 | trxA | -1.6 | -4.1 | thioredoxin 1 (VIMSS) | compare |
| b1730 | ydjO | -1.5 | -2.1 | predicted protein (RefSeq) | compare |
| b0149 | mrcB | -1.5 | -12.0 | penicillin-binding protein 1b (NCBI) | compare |
| b3609 | secB | -1.4 | -3.1 | export protein SecB (NCBI) | compare |
| b2846 | yqeH | -1.3 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0759 | galE | -1.3 | -6.2 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b0738 | tolR | -1.3 | -3.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3652 | recG | -1.3 | -8.6 | ATP-dependent DNA helicase (NCBI) | compare |
| b3229 | sspA | -1.3 | -4.2 | stringent starvation protein A (NCBI) | compare |
| b3198 | kdsC | -1.3 | -5.6 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b4676 | yoaK | -1.3 | -0.6 | expressed protein (RefSeq) | compare |
| b4202 | rpsR | -1.2 | -1.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b2937 | speB | -1.2 | -7.7 | agmatinase (NCBI) | compare |
| b1269 | rluB | -1.2 | -3.7 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3849 | trkH | -1.1 | -8.1 | potassium transporter (NCBI) | compare |
| b3728 | pstS | -1.1 | -4.2 | phosphate transporter subunit (NCBI) | compare |
| b2894 | xerD | -1.1 | -0.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0685 | ybfE | -1.1 | -4.0 | orf, hypothetical protein (VIMSS) | compare |
| b2479 | gcvR | -1.1 | -5.1 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0912 | ihfB | -1.1 | -5.0 | integration host factor subunit beta (NCBI) | compare |
| b0014 | dnaK | -1.1 | -3.2 | molecular chaperone DnaK (NCBI) | compare |
| b0049 | apaH | -1.0 | -3.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b1159 | mcrA | -1.0 | -1.5 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b1258 | yciF | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b1130 | phoP | -1.0 | -2.5 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3164 | pnp | -1.0 | -2.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1850 | eda | -1.0 | -2.6 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3863 | polA | -1.0 | -0.9 | DNA polymerase I (NCBI) | compare |
| b2814 | metZ | -1.0 | -1.8 | tRNA-Met (NCBI) | compare |
| b1292 | sapC | -1.0 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0737 | tolQ | -0.9 | -2.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2820 | recB | -0.9 | -0.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0439 | lon | -0.9 | -4.8 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3082 | ygjM | -0.9 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0088 | murD | -0.9 | -3.2 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3386 | rpe | -0.9 | -1.1 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b0890 | ftsK | -0.9 | -2.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0630 | lipB | -0.9 | -1.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2569 | lepA | -0.9 | -3.1 | GTP-binding protein LepA (NCBI) | compare |
| b3341 | rpsG | -0.9 | -1.2 | 30S ribosomal protein S7 (NCBI) | compare |
| b1025 | ycdT | -0.9 | -1.7 | predicted diguanylate cyclase (NCBI) | compare |
| b1129 | phoQ | -0.8 | -2.3 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0082 | mraW | -0.8 | -2.9 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3868 | glnG | -0.8 | -4.5 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1351 | racC | -0.8 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b3149 | yraO | -0.8 | -5.9 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b4146 | yjeK | -0.8 | -2.0 | predicted lysine aminomutase (NCBI) | compare |
| b3741 | gidA | -0.8 | -3.2 | glucose-inhibited division protein A (NCBI) | compare |
| b1658 | purR | -0.8 | -4.2 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1557 | cspB | -0.8 | -1.8 | Qin prophage; cold shock protein (NCBI) | compare |
| b4685 | yrbN | -0.8 | -1.7 | expressed protein (RefSeq) | compare |
| b2620 | smpB | -0.8 | -1.0 | SsrA-binding protein (NCBI) | compare |
| b2318 | truA | -0.8 | -2.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0406 | tgt | -0.8 | -4.5 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b1293 | sapB | -0.8 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1160 | elbA | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b3977 | tyrU | -0.7 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b3205 | yhbJ | -0.7 | -3.6 | hypothetical protein (NCBI) | compare |
| b0767 | ybhE | -0.7 | -2.9 | 6-phosphogluconolactonase (NCBI) | compare |
| b0758 | galT | -0.7 | -5.2 | galactose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4235 | pmbA | -0.7 | -5.8 | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | compare |
| b4505 | insX | -0.7 | -1.7 | predicted IS protein (RefSeq) | compare |
| b0605 | ahpC | -0.7 | -2.0 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1095 | fabF | -0.7 | -5.1 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b4647 | mokA | -0.7 | -0.8 | no description | compare |
| b4701 | sokX | -0.7 | -0.9 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3021 | ygiT | -0.7 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1476 | fdnI | -0.7 | -1.1 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3706 | trmE | -0.7 | -2.7 | tRNA modification GTPase (NCBI) | compare |
| b4179 | vacB | -0.7 | -4.0 | putative enzyme (VIMSS) | compare |
| b3026 | qseC | -0.7 | -2.9 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0386 | proC | -0.7 | -4.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.5 | cold shock protein E (NCBI) | compare |
| b0226 | dinJ | -0.7 | -1.2 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1438 | ydcQ | -0.7 | -3.4 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1551 | b1551 | -0.7 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1576 | ydfD | -0.7 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1363 | trkG | -0.7 | -0.4 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4208 | cycA | -0.7 | -5.4 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b1497 | b1497 | -0.7 | -0.3 | putative enzyme (VIMSS) | compare |
| b1499 | ydeO | -0.7 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1579 | intQ | -0.7 | -2.4 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b4414 | tff | -0.7 | -1.5 | unknown RNA (NCBI) | compare |
| b1324 | tpx | -0.7 | -2.3 | thiol peroxidase (NCBI) | compare |
| b0949 | uup | -0.7 | -4.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1841 | yobA | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b3071 | yqjI | -0.7 | -3.4 | predicted transcriptional regulator (NCBI) | compare |
| b1111 | ycfQ | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1182 | hlyE | -0.7 | -0.4 | hemolysin E (VIMSS) | compare |
| b0746 | valZ | -0.6 | -2.3 | tRNA-Val (NCBI) | compare |
| b3169 | nusA | -0.6 | -1.5 | transcription elongation factor NusA (NCBI) | compare |
| b1165 | ymgA | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b4171 | miaA | -0.6 | -2.2 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3775 | ppiC | -0.6 | -3.3 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b2518 | ndk | -0.6 | -1.7 | nucleoside diphosphate kinase (NCBI) | compare |
| b1877 | yecT | -0.6 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4201 | priB | -0.6 | -1.6 | primosomal replication protein N (NCBI) | compare |
| b1259 | yciG | -0.6 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0739 | tolA | -0.6 | -2.4 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1545 | pinQ | -0.6 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1582 | ynfA | -0.6 | -1.7 | hypothetical protein (NCBI) | compare |
| b2938 | speA | -0.6 | -5.0 | arginine decarboxylase (NCBI) | compare |
| b3035 | tolC | -0.6 | -4.0 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1642 | slyA | -0.6 | -1.2 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0340 | cynS | -0.6 | -2.1 | cyanate hydratase (NCBI) | compare |
| b1951 | rcsA | -0.6 | -1.0 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b0101 | yacG | -0.6 | -2.2 | zinc-binding protein (NCBI) | compare |
| b1676 | pykF | -0.6 | -2.0 | pyruvate kinase (NCBI) | compare |
| b2168 | fruK | -0.6 | -0.6 | 1-phosphofructokinase (NCBI) | compare |
| b4570 | lomR | -0.6 | -1.0 | no description | compare |
| b1236 | galU | -0.6 | -2.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4239 | treC | -0.6 | -1.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b1429 | tehA | -0.6 | -1.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1332 | ynaJ | -0.6 | -0.4 | predicted inner membrane protein (NCBI) | compare |
| b3129 | sohA | -0.6 | -2.9 | predicted regulator (NCBI) | compare |
| b1502 | ydeQ | -0.6 | -1.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1882 | cheY | -0.6 | -0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2007 | yeeX | -0.6 | -1.8 | conserved protein (RefSeq) | compare |
| b4640 | yoeG | -0.6 | -2.1 | no description | compare |
| b1257 | yciE | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b1176 | minC | -0.6 | -1.6 | septum formation inhibitor (NCBI) | compare |
| b3244 | tldD | -0.6 | -4.6 | predicted peptidase (NCBI) | compare |
| b3163 | nlpI | -0.6 | -2.4 | hypothetical protein (NCBI) | compare |
| b1647 | ydhF | -0.6 | -3.2 | predicted oxidoreductase (NCBI) | compare |
| b4590 | ybfK | -0.6 | -0.7 | hypothetical protein (RefSeq) | compare |
| b0585 | fes | -0.6 | -3.2 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b2051 | wcaH | -0.6 | -0.6 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b3961 | oxyR | -0.6 | -3.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2614 | grpE | -0.5 | -1.9 | heat shock protein (NCBI) | compare |
| b3621 | rfaC | -0.5 | -2.6 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2582 | trxC | -0.5 | -1.4 | thioredoxin 2 (NCBI) | compare |
| b1861 | ruvA | -0.5 | -0.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2340 | sixA | -0.5 | -1.7 | phosphohistidine phosphatase (NCBI) | compare |
| b3545 | proK | -0.5 | -1.2 | tRNA-Pro (NCBI) | compare |
| b1167 | ymgC | -0.5 | -0.2 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | -0.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2948 | yqgE | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2055 | wcaE | -0.5 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b0450 | glnK | -0.5 | -1.9 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b3289 | rsmB | -0.5 | -4.0 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |
| b1286 | rnb | -0.5 | -1.3 | exoribonuclease II (NCBI) | compare |
| b4022 | yjbC | -0.5 | -3.8 | 23S rRNA pseudouridine synthase (NCBI) | compare |
| b4180 | rlmB | -0.5 | -3.1 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b1690 | ydiM | -0.5 | -1.5 | predicted transporter (NCBI) | compare |
| b3619 | rfaD | -0.5 | -1.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0263 | afuB | -0.5 | -2.0 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b2784 | relA | -0.5 | -3.4 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0015 | dnaJ | -0.5 | -3.3 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b2066 | udk | -0.5 | -3.5 | uridine/cytidine kinase (VIMSS) | compare |
| b3120 | yhaB | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1323 | tyrR | -0.5 | -2.7 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b4497 | yeeL | -0.5 | -0.8 | no description | compare |
| b4203 | rplI | -0.5 | -3.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b1527 | yneK | -0.5 | -1.8 | hypothetical protein (NCBI) | compare |
| b2699 | recA | -0.5 | -0.5 | recombinase A (NCBI) | compare |
| b2198 | ccmD | -0.5 | -1.3 | cytochrome c biogenesis protein (NCBI) | compare |
| b1001 | yccE | -0.5 | -0.2 | hypothetical protein (NCBI) | compare |
| b0740 | tolB | -0.5 | -2.3 | translocation protein TolB precursor (NCBI) | compare |
| b2688 | gshA | -0.5 | -3.1 | glutamate--cysteine ligase (NCBI) | compare |
| b0908 | aroA | -0.5 | -3.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3389 | aroB | -0.5 | -3.6 | 3-dehydroquinate synthase (NCBI) | compare |
| b1105 | ycfM | -0.5 | -2.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1533 | ydeD | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4511 | ybdZ | -0.5 | -2.0 | hypothetical protein (NCBI) | compare |
| b0237 | pepD | -0.5 | -3.2 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b1855 | lpxM | -0.5 | -1.9 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0683 | fur | -0.5 | -0.5 | ferric uptake regulator (NCBI) | compare |
| b0976 | hyaE | -0.5 | -2.3 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b1920 | fliY | -0.5 | -0.9 | cystine transporter subunit (NCBI) | compare |
| b0741 | pal | -0.5 | -2.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1950 | fliR | -0.5 | -2.0 | flagellar biosynthesis protein R (NCBI) | compare |
| b1536 | ydeI | -0.5 | -0.6 | hypothetical protein (NCBI) | compare |