| | gene | name | fitness | t score | description | |
|---|
| b0920 | ycbC | -8.2 | -8.0 | conserved inner membrane protein (NCBI) | compare |
| b3871 | bipA | -6.2 | -21.8 | GTP-binding protein (NCBI) | compare |
| b3341 | rpsG | -6.1 | -3.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b1176 | minC | -5.1 | -6.1 | septum formation inhibitor (NCBI) | compare |
| b3390 | aroK | -4.8 | -3.3 | shikimate kinase I (NCBI) | compare |
| b3162 | deaD | -4.6 | -7.7 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1293 | sapB | -4.3 | -3.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0439 | lon | -4.0 | -6.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3636 | rpmG | -4.0 | -4.1 | 50S ribosomal protein L33 (NCBI) | compare |
| b3164 | pnp | -3.9 | -7.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4234 | yjgA | -3.9 | -13.1 | hypothetical protein (NCBI) | compare |
| b0049 | apaH | -3.8 | -6.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b2620 | smpB | -3.6 | -2.8 | SsrA-binding protein (NCBI) | compare |
| b3652 | recG | -3.6 | -16.8 | ATP-dependent DNA helicase (NCBI) | compare |
| b3229 | sspA | -3.5 | -6.5 | stringent starvation protein A (NCBI) | compare |
| b3261 | fis | -3.3 | -2.2 | DNA-binding protein Fis (NCBI) | compare |
| b2479 | gcvR | -3.1 | -8.5 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0014 | dnaK | -3.1 | -3.8 | molecular chaperone DnaK (NCBI) | compare |
| b3204 | ptsN | -3.1 | -8.6 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3979 | thrT | -3.1 | -1.1 | tRNA-Thr (NCBI) | compare |
| b1175 | minD | -3.1 | -5.2 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2576 | srmB | -3.0 | -6.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b0149 | mrcB | -3.0 | -17.8 | penicillin-binding protein 1b (NCBI) | compare |
| b2531 | iscR | -2.9 | -2.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2498 | upp | -2.9 | -5.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b4202 | rpsR | -2.9 | -3.3 | 30S ribosomal protein S18 (NCBI) | compare |
| b0888 | trxB | -2.9 | -4.3 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0051 | ksgA | -2.9 | -7.7 | dimethyladenosine transferase (NCBI) | compare |
| b3619 | rfaD | -2.8 | -5.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3493 | pitA | -2.8 | -14.4 | phosphate transporter, low-affinity (NCBI) | compare |
| b2937 | speB | -2.7 | -10.2 | agmatinase (NCBI) | compare |
| b3183 | obgE | -2.7 | -3.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2912 | ygfA | -2.6 | -5.0 | putative ligase (VIMSS) | compare |
| b0683 | fur | -2.6 | -2.2 | ferric uptake regulator (NCBI) | compare |
| b1290 | sapF | -2.5 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2350 | yfdG | -2.5 | -4.0 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b4375 | prfC | -2.5 | -1.7 | peptide chain release factor 3 (NCBI) | compare |
| b2330 | yfcB | -2.4 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b0912 | ihfB | -2.4 | -6.2 | integration host factor subunit beta (NCBI) | compare |
| b1676 | pykF | -2.4 | -5.4 | pyruvate kinase (NCBI) | compare |
| b3621 | rfaC | -2.4 | -7.6 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2168 | fruK | -2.3 | -1.8 | 1-phosphofructokinase (NCBI) | compare |
| b3792 | wzxE | -2.3 | -11.3 | O-antigen translocase (NCBI) | compare |
| b3609 | secB | -2.3 | -2.2 | export protein SecB (NCBI) | compare |
| b3052 | rfaE | -2.3 | -6.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3706 | trmE | -2.2 | -7.4 | tRNA modification GTPase (NCBI) | compare |
| b3868 | glnG | -2.1 | -7.9 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b3414 | gntY | -2.0 | -7.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b1095 | fabF | -2.0 | -7.8 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3613 | yibP | -2.0 | -3.8 | putative membrane protein (VIMSS) | compare |
| b1863 | ruvC | -2.0 | -2.6 | Holliday junction resolvase (NCBI) | compare |
| b0082 | mraW | -2.0 | -4.2 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3781 | trxA | -2.0 | -6.5 | thioredoxin 1 (VIMSS) | compare |
| b4146 | yjeK | -1.9 | -2.3 | predicted lysine aminomutase (NCBI) | compare |
| b3290 | trkA | -1.9 | -1.9 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3728 | pstS | -1.9 | -5.9 | phosphate transporter subunit (NCBI) | compare |
| b1865 | nudB | -1.9 | -2.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1292 | sapC | -1.9 | -3.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4685 | yrbN | -1.9 | -5.7 | expressed protein (RefSeq) | compare |
| b3863 | polA | -1.9 | -1.7 | DNA polymerase I (NCBI) | compare |
| b0406 | tgt | -1.8 | -8.7 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3169 | nusA | -1.8 | -5.3 | transcription elongation factor NusA (NCBI) | compare |
| b1187 | fadR | -1.8 | -3.0 | fatty acid metabolism regulator (NCBI) | compare |
| b3500 | gor | -1.8 | -3.1 | glutathione reductase (NCBI) | compare |
| b3916 | pfkA | -1.8 | -5.3 | 6-phosphofructokinase (NCBI) | compare |
| b1860 | ruvB | -1.8 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b2830 | nudH | -1.8 | -2.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0737 | tolQ | -1.8 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1236 | galU | -1.7 | -3.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2569 | lepA | -1.7 | -5.8 | GTP-binding protein LepA (NCBI) | compare |
| b2567 | rnc | -1.7 | -1.1 | ribonuclease III (NCBI) | compare |
| b3811 | xerC | -1.7 | -1.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2501 | ppk | -1.7 | -8.5 | polyphosphate kinase (NCBI) | compare |
| b4402 | yjjY | -1.7 | -2.0 | hypothetical protein (NCBI) | compare |
| b3616 | tdh | -1.7 | -7.9 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b3741 | gidA | -1.6 | -4.9 | glucose-inhibited division protein A (NCBI) | compare |
| b1286 | rnb | -1.6 | -2.9 | exoribonuclease II (NCBI) | compare |
| b2846 | yqeH | -1.6 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0759 | galE | -1.6 | -4.4 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b0741 | pal | -1.6 | -5.2 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0088 | murD | -1.6 | -1.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3849 | trkH | -1.6 | -11.4 | potassium transporter (NCBI) | compare |
| b0630 | lipB | -1.6 | -1.1 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4201 | priB | -1.6 | -3.0 | primosomal replication protein N (NCBI) | compare |
| b3198 | kdsC | -1.6 | -4.5 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3961 | oxyR | -1.6 | -9.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2814 | metZ | -1.6 | -2.3 | tRNA-Met (NCBI) | compare |
| b3026 | qseC | -1.5 | -5.4 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2688 | gshA | -1.5 | -8.5 | glutamate--cysteine ligase (NCBI) | compare |
| b3237 | argR | -1.5 | -5.3 | arginine repressor (NCBI) | compare |
| b3839 | tatC | -1.5 | -7.0 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0200 | gmhB | -1.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | -1.5 | -5.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0767 | ybhE | -1.4 | -4.4 | 6-phosphogluconolactonase (NCBI) | compare |
| b3035 | tolC | -1.4 | -8.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0890 | ftsK | -1.4 | -2.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0222 | lpcA | -1.4 | -2.1 | phosphoheptose isomerase (NCBI) | compare |
| b2318 | truA | -1.4 | -3.0 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3205 | yhbJ | -1.3 | -5.3 | hypothetical protein (NCBI) | compare |
| b1556 | b1556 | -1.3 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2363 | yfdT | -1.3 | -3.0 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2892 | recJ | -1.3 | -7.0 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b4208 | cycA | -1.2 | -8.5 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b4180 | rlmB | -1.2 | -6.8 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b0053 | surA | -1.2 | -5.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2518 | ndk | -1.2 | -1.7 | nucleoside diphosphate kinase (NCBI) | compare |
| b0740 | tolB | -1.2 | -4.8 | translocation protein TolB precursor (NCBI) | compare |
| b1480 | sra | -1.2 | -1.7 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1861 | ruvA | -1.2 | -1.1 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2935 | tktA | -1.2 | -1.6 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0226 | dinJ | -1.2 | -1.5 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3816 | corA | -1.2 | -8.5 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0738 | tolR | -1.2 | -3.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1323 | tyrR | -1.2 | -5.4 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b0623 | cspE | -1.2 | -2.8 | cold shock protein E (NCBI) | compare |
| b2297 | pta | -1.1 | -0.8 | phosphate acetyltransferase (NCBI) | compare |
| b4179 | vacB | -1.1 | -5.4 | putative enzyme (VIMSS) | compare |
| b0386 | proC | -1.1 | -5.3 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1730 | ydjO | -1.1 | -0.9 | predicted protein (RefSeq) | compare |
| b3778 | rep | -1.1 | -6.2 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1269 | rluB | -1.1 | -2.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b1658 | purR | -1.1 | -4.2 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1524 | yneH | -1.1 | -1.1 | predicted glutaminase (NCBI) | compare |
| b3149 | yraO | -1.1 | -5.7 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b4177 | purA | -1.1 | -1.6 | adenylosuccinate synthetase (NCBI) | compare |
| b2953 | yggU | -1.1 | -4.0 | orf, hypothetical protein (VIMSS) | compare |
| b1671 | ydhX | -1.1 | -2.4 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b3082 | ygjM | -1.0 | -2.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2699 | recA | -1.0 | -0.7 | recombinase A (NCBI) | compare |
| b2007 | yeeX | -1.0 | -1.9 | conserved protein (RefSeq) | compare |
| b3617 | kbl | -1.0 | -6.6 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b4243 | yjgF | -1.0 | -4.8 | orf, hypothetical protein (VIMSS) | compare |
| b3651 | trmH | -1.0 | -4.2 | tRNA (Guanosine-2'-O-)-methyltransferase (NCBI) | compare |
| b2820 | recB | -1.0 | -0.7 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0605 | ahpC | -1.0 | -2.3 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2340 | sixA | -1.0 | -3.3 | phosphohistidine phosphatase (NCBI) | compare |
| b0677 | nagA | -0.9 | -3.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1361 | ydaW | -0.9 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1304 | pspA | -0.9 | -2.9 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b1105 | ycfM | -0.9 | -2.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b3465 | yhhF | -0.9 | -5.2 | predicted methyltransferase (NCBI) | compare |
| b1557 | cspB | -0.9 | -1.5 | Qin prophage; cold shock protein (NCBI) | compare |
| b1984 | asnW | -0.9 | -1.2 | tRNA-Asn (NCBI) | compare |
| b4383 | deoB | -0.9 | -7.0 | phosphopentomutase (NCBI) | compare |
| b3163 | nlpI | -0.9 | -2.5 | hypothetical protein (NCBI) | compare |
| b0949 | uup | -0.9 | -5.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3870 | glnA | -0.9 | -2.0 | glutamine synthetase (NCBI) | compare |
| b3869 | glnL | -0.9 | -5.0 | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | compare |
| b1936 | intG | -0.9 | -1.0 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0237 | pepD | -0.9 | -5.5 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b3726 | pstA | -0.9 | -4.0 | phosphate transporter subunit (NCBI) | compare |
| b4384 | deoD | -0.9 | -5.9 | purine nucleoside phosphorylase (NCBI) | compare |
| b3650 | spoT | -0.9 | -4.0 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b0678 | nagB | -0.8 | -2.5 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b0472 | recR | -0.8 | -4.6 | recombination protein RecR (NCBI) | compare |
| b1382 | ynbE | -0.8 | -1.5 | predicted lipoprotein (NCBI) | compare |
| b3006 | exbB | -0.8 | -4.9 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1438 | ydcQ | -0.8 | -3.3 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3005 | exbD | -0.8 | -2.9 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1048 | mdoG | -0.8 | -3.7 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0469 | apt | -0.8 | -5.0 | adenine phosphoribosyltransferase (NCBI) | compare |
| b1558 | cspF | -0.8 | -2.3 | Qin prophage; cold shock protein (NCBI) | compare |
| b1360 | ydaV | -0.8 | -2.7 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b0142 | folK | -0.8 | -0.5 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4235 | pmbA | -0.8 | -5.9 | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | compare |
| b0167 | glnD | -0.8 | -3.5 | PII uridylyl-transferase (NCBI) | compare |
| b1245 | oppC | -0.8 | -4.3 | oligopeptide transporter subunit (NCBI) | compare |
| b4239 | treC | -0.8 | -1.9 | trehalose-6-P hydrolase (NCBI) | compare |
| b4178 | yjeB | -0.8 | -3.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4553 | ysaB | -0.8 | -4.6 | hypothetical protein (NCBI) | compare |
| b3761 | trpT | -0.8 | -1.9 | tRNA-Trp (NCBI) | compare |
| b3244 | tldD | -0.8 | -6.0 | predicted peptidase (NCBI) | compare |
| b0585 | fes | -0.7 | -4.1 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b0658 | ybeX | -0.7 | -1.5 | predicteed ion transport (NCBI) | compare |
| b0908 | aroA | -0.7 | -4.9 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1855 | lpxM | -0.7 | -2.7 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3700 | recF | -0.7 | -6.1 | recombination protein F (NCBI) | compare |
| b3935 | priA | -0.7 | -1.9 | primosome assembly protein PriA (NCBI) | compare |
| b2947 | gshB | -0.7 | -4.0 | glutathione synthetase (NCBI) | compare |
| b3021 | ygiT | -0.7 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2565 | recO | -0.7 | -5.1 | DNA repair protein RecO (NCBI) | compare |
| b0627 | tatE | -0.7 | -2.0 | twin arginine translocase protein E (NCBI) | compare |
| b0143 | pcnB | -0.7 | -4.6 | poly(A) polymerase I (VIMSS) | compare |
| b0999 | cbpM | -0.7 | -1.9 | modulator of CbpA co-chaperone (NCBI) | compare |
| b2948 | yqgE | -0.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1248 | b1248 | -0.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2436 | hemF | -0.7 | -3.1 | coproporphyrinogen III oxidase (NCBI) | compare |
| b0113 | pdhR | -0.7 | -4.1 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b4171 | miaA | -0.7 | -2.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1324 | tpx | -0.7 | -3.1 | thiol peroxidase (NCBI) | compare |
| b4699 | fnrS | -0.7 | -0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b0726 | sucA | -0.7 | -2.0 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3977 | tyrU | -0.7 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b0428 | cyoE | -0.7 | -3.7 | protoheme IX farnesyltransferase (NCBI) | compare |
| b2329 | aroC | -0.7 | -3.5 | chorismate synthase (NCBI) | compare |
| b1251 | yciI | -0.7 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b3386 | rpe | -0.7 | -0.5 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b4511 | ybdZ | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b4049 | dusA | -0.7 | -4.6 | tRNA-dihydrouridine synthase A (RefSeq) | compare |
| b0506 | allR | -0.7 | -2.4 | DNA-binding transcriptional repressor (NCBI) | compare |