Experiment set5S696 for Mucilaginibacter yixingensis YX-36 DSM 26809

Compare to:

polygalacturonic acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
ABZR88_RS01765 -5.1 -5.6 short chain dehydrogenase compare
ABZR88_RS10490 -4.4 -10.9 UxaA family hydrolase compare
ABZR88_RS16200 -4.0 -11.5 MFS transporter conserved
ABZR88_RS10495 -4.0 -11.4 tagaturonate reductase compare
ABZR88_RS13810 -4.0 -5.4 SDR family NAD(P)-dependent oxidoreductase compare
ABZR88_RS16460 -2.9 -6.3 catalase/peroxidase HPI compare
ABZR88_RS08490 -2.7 -8.3 RagB/SusD family nutrient uptake outer membrane protein conserved
ABZR88_RS08495 -2.7 -13.2 TonB-dependent receptor conserved
ABZR88_RS08500 -2.6 -15.1 hybrid sensor histidine kinase/response regulator transcription factor compare
ABZR88_RS08380 -2.5 -5.2 RagB/SusD family nutrient uptake outer membrane protein compare
ABZR88_RS16935 -2.5 -7.9 nitrate reductase compare
ABZR88_RS03365 -2.5 -5.8 ABC transporter ATP-binding protein compare
ABZR88_RS00395 -2.3 -7.2 serine hydrolase compare
ABZR88_RS06695 -2.2 -6.2 hypothetical protein compare
ABZR88_RS17865 -2.2 -8.5 glycoside hydrolase family 28 protein compare
ABZR88_RS10380 -2.2 -6.1 DUF4251 domain-containing protein compare
ABZR88_RS06700 -2.2 -9.7 OmpP1/FadL family transporter compare
ABZR88_RS19730 -2.0 -8.4 S8 family serine peptidase compare
ABZR88_RS11995 -2.0 -7.8 ABC transporter ATP-binding protein compare
ABZR88_RS06245 -2.0 -8.9 RagB/SusD family nutrient uptake outer membrane protein compare
ABZR88_RS08400 -2.0 -6.3 hypothetical protein compare
ABZR88_RS06240 -2.0 -11.1 TonB-dependent receptor compare
ABZR88_RS16900 -1.8 -5.5 hypothetical protein compare
ABZR88_RS10385 -1.8 -7.0 ATP-binding cassette domain-containing protein compare
ABZR88_RS21600 -1.8 -5.7 molybdopterin molybdotransferase MoeA compare
ABZR88_RS20995 -1.7 -6.0 PIG-L family deacetylase compare
ABZR88_RS06775 -1.7 -5.5 hypothetical protein compare
ABZR88_RS08395 -1.6 -5.3 hypothetical protein compare
ABZR88_RS16685 -1.6 -6.4 HAMP domain-containing sensor histidine kinase compare
ABZR88_RS16320 -1.6 -5.9 hypothetical protein compare
ABZR88_RS11740 -1.5 -6.8 YggS family pyridoxal phosphate-dependent enzyme compare
ABZR88_RS10565 -1.5 -7.0 thioredoxin family protein compare
ABZR88_RS10530 -1.4 -6.9 LacI family DNA-binding transcriptional regulator compare
ABZR88_RS09545 -1.4 -5.7 PLP-dependent aspartate aminotransferase family protein compare
ABZR88_RS09455 -1.3 -5.3 PhoH family protein compare
ABZR88_RS13440 +1.0 5.6 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein compare
ABZR88_RS01015 +1.1 5.3 DUF3826 domain-containing protein compare
ABZR88_RS07555 +1.1 7.7 GAF domain-containing protein compare
ABZR88_RS10445 +1.2 8.8 response regulator compare
ABZR88_RS04705 +1.2 5.5 hypothetical protein compare
ABZR88_RS01815 +1.2 5.8 ABC transporter ATP-binding protein compare
ABZR88_RS02030 +1.2 5.8 NADPH-dependent FMN reductase compare
ABZR88_RS11675 +1.2 5.4 alpha/beta fold hydrolase compare
ABZR88_RS15710 +1.2 6.4 YqjF family protein compare
ABZR88_RS04590 +1.3 6.0 YdeI/OmpD-associated family protein compare
ABZR88_RS12010 +1.3 5.2 MBL fold metallo-hydrolase compare
ABZR88_RS12925 +1.4 5.5 FecR family protein compare
ABZR88_RS08215 +1.5 6.7 PAS domain-containing protein compare
ABZR88_RS16255 +1.5 8.9 AI-2E family transporter compare
ABZR88_RS17410 +1.6 6.8 OmpH family outer membrane protein compare
ABZR88_RS21485 +1.6 5.1 response regulator transcription factor compare
ABZR88_RS01520 +1.7 10.1 efflux RND transporter periplasmic adaptor subunit compare
ABZR88_RS06590 +1.7 9.5 BlaI/MecI/CopY family transcriptional regulator compare
ABZR88_RS03535 +1.7 7.1 threonine synthase compare
ABZR88_RS15525 +1.7 7.5 DUF2147 domain-containing protein compare
ABZR88_RS13435 +1.7 7.3 acetyl-CoA C-acyltransferase compare
ABZR88_RS19120 +1.7 7.4 S41 family peptidase compare
ABZR88_RS07570 +1.8 6.1 Pycsar system effector family protein compare
ABZR88_RS00390 +1.8 7.2 amidohydrolase compare
ABZR88_RS17050 +1.8 6.1 DNA mismatch repair protein MutS compare
ABZR88_RS19850 +2.0 7.2 outer membrane beta-barrel family protein compare
ABZR88_RS03945 +2.0 9.2 ABC transporter permease compare
ABZR88_RS19840 +2.3 7.4 PspC domain-containing protein compare
ABZR88_RS04980 +2.3 12.2 amino acid permease compare
ABZR88_RS11850 +2.6 15.3 putative sensor domain DACNV-containing protein compare
ABZR88_RS16695 +2.6 13.7 glycoside hydrolase family 130 protein compare
ABZR88_RS14685 +3.1 13.6 long-chain fatty acid--CoA ligase compare


Specific phenotypes for carbon source polygalacturonic acid across organisms