Experiment set5S562 for Escherichia coli ECOR27

Compare to:

Bas74

200 most important genes:

  gene name fitness t score description  
NOLOHH_09835 obgE -4.0 -1.8 GTPase ObgE compare
NOLOHH_19845 recT -3.2 -2.2 recombination protein RecT compare
NOLOHH_21130 yceD -3.1 -3.0 23S rRNA accumulation protein YceD compare
NOLOHH_05490 hupA -2.6 -1.7 DNA-binding protein HU-alpha compare
NOLOHH_22585 mcbA -2.6 -2.0 DUF1471 domain-containing protein compare
NOLOHH_14780 apbE -2.6 -3.4 FAD:protein FMN transferase ApbE compare
NOLOHH_06550 xerC -2.5 -2.4 tyrosine recombinase XerC compare
NOLOHH_24755 -2.5 -1.5 toxin ArtA compare
NOLOHH_06530 corA -2.5 -4.1 magnesium/cobalt transporter CorA compare
NOLOHH_22075 pflA -2.4 -2.8 pyruvate formate lyase 1-activating protein compare
NOLOHH_20915 phoP -2.3 -2.6 two-component system response regulator PhoP compare
NOLOHH_13300 iscA -2.3 -2.3 iron-sulfur cluster assembly protein IscA compare
NOLOHH_20905 hflD -2.2 -2.3 high frequency lysogenization protein HflD compare
NOLOHH_17170 insQ -2.0 -1.2 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_11495 xerD -2.0 -2.8 site-specific tyrosine recombinase XerD compare
NOLOHH_24460 -2.0 -1.6 LngX2 compare
NOLOHH_20940 potB -2.0 -2.6 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_24675 finO -1.9 -11.2 Fertility inhibition protein compare
NOLOHH_23315 sucA -1.9 -1.8 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_19520 -1.9 -1.6 YnbE family lipoprotein compare
NOLOHH_02710 yadN -1.9 -1.6 Uncharacterized fimbrial-like protein YadN compare
NOLOHH_03190 apaH -1.9 -5.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_19565 sitA -1.7 -3.0 iron/manganese ABC transporter substrate-binding protein SitA compare
NOLOHH_03340 -1.6 -1.4 fimbrial family protein compare
NOLOHH_18950 dosP -1.6 -2.8 oxygen-sensing cyclic-di-GMP phosphodiesterase compare
NOLOHH_12545 recA -1.6 -2.3 recombinase RecA compare
NOLOHH_20895 nudJ -1.6 -1.5 phosphatase NudJ compare
NOLOHH_05815 metL -1.6 -8.5 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_21940 aspC -1.6 -2.1 aspartate transaminase compare
NOLOHH_17880 mdtK -1.6 -2.9 multidrug efflux MATE transporter MdtK compare
NOLOHH_18130 uidB -1.5 -2.0 glucuronide transporter compare
NOLOHH_20755 umuD -1.5 -3.1 Protein UmuD compare
NOLOHH_09845 greA -1.5 -1.6 transcription elongation factor GreA compare
NOLOHH_16080 -1.5 -1.3 hypothetical protein compare
NOLOHH_18350 -1.5 -1.2 Putative prophage protein compare
NOLOHH_00560 -1.5 -1.4 phage portal protein compare
NOLOHH_01270 clpP -1.5 -2.6 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_07125 -1.5 -3.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_19430 paaY -1.5 -1.6 phenylacetic acid degradation protein PaaY compare
NOLOHH_04085 rraB -1.5 -3.6 ribonuclease E inhibitor RraB compare
NOLOHH_19510 feaR -1.5 -2.5 transcriptional regulator FeaR compare
NOLOHH_20295 rluB -1.5 -3.5 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_11230 tkt -1.5 -1.9 transketolase compare
NOLOHH_11515 lysS -1.5 -1.7 lysine--tRNA ligase compare
NOLOHH_06675 wzxE -1.4 -4.0 lipid III flippase WzxE compare
NOLOHH_00385 -1.4 -3.2 hypothetical protein compare
NOLOHH_20745 dsbB -1.4 -2.8 disulfide bond formation protein DsbB compare
NOLOHH_20185 rnb -1.4 -2.2 exoribonuclease II compare
NOLOHH_14120 emrK -1.3 -2.6 multidrug efflux MFS transporter periplasmic adaptor subunit EmrK compare
NOLOHH_07535 rfaG -1.3 -3.8 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_07555 rfaJ -1.3 -1.9 glucosyltransferase compare
NOLOHH_23250 tolR -1.3 -2.6 colicin uptake protein TolR compare
NOLOHH_07540 rfaP -1.3 -4.1 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_06755 ppiC -1.3 -2.2 peptidylprolyl isomerase PpiC compare
NOLOHH_23865 -1.3 -1.6 hypothetical protein compare
NOLOHH_11365 rpiA -1.2 -1.6 ribose-5-phosphate isomerase RpiA compare
NOLOHH_11425 ubiI -1.2 -1.6 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_13640 arsC -1.2 -1.3 ArsC family reductase compare
NOLOHH_14200 sixA -1.2 -2.1 phosphohistidine phosphatase SixA compare
NOLOHH_21490 efeU -1.2 -1.6 Ferrous iron permease EfeU compare
NOLOHH_14305 truA -1.2 -3.4 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_19475 paaD -1.2 -1.9 phenylacetate degradation protein PaaD compare
NOLOHH_00445 -1.2 -4.2 peptidyl-arginine deiminase compare
NOLOHH_17455 cho -1.2 -2.5 excinuclease Cho compare
NOLOHH_23480 pgm -1.2 -2.5 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_02510 skp -1.2 -1.2 molecular chaperone Skp compare
NOLOHH_13035 srmB -1.1 -5.5 ATP-dependent RNA helicase SrmB compare
NOLOHH_20425 -1.1 -1.8 hypothetical protein compare
NOLOHH_19010 gntT -1.1 -1.5 transporter compare
NOLOHH_02125 dinJ -1.1 -3.0 type II toxin-antitoxin system antitoxin DinJ compare
NOLOHH_17330 ydjA -1.1 -1.0 NAD(P)H nitroreductase compare
NOLOHH_16285 fliR -1.1 -1.3 flagellar type III secretion system protein FliR compare
NOLOHH_05225 dgkA -1.1 -2.5 diacylglycerol kinase compare
NOLOHH_12775 -1.1 -2.3 Response-reg-2 domain-containing protein compare
NOLOHH_17670 fadK -1.1 -1.8 medium-chain fatty-acid--CoA ligase compare
NOLOHH_00525 -1.1 -1.1 Tail tube terminator protein compare
NOLOHH_01245 ppiD -1.1 -2.0 peptidylprolyl isomerase compare
NOLOHH_21095 fabF -1.1 -1.6 beta-ketoacyl-ACP synthase II compare
NOLOHH_09695 arcB -1.1 -3.5 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_14505 nuoK -1.1 -2.0 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_20255 yciX -1.1 -1.3 YmiA family putative membrane protein compare
NOLOHH_06920 mnmG -1.1 -3.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_06665 wzyE -1.1 -3.4 ECA oligosaccharide polymerase compare
NOLOHH_12770 -1.1 -1.1 ATP-binding protein compare
NOLOHH_18065 rsxC -1.0 -3.5 electron transport complex subunit RsxC compare
NOLOHH_08900 aroK -1.0 -1.1 shikimate kinase AroK compare
NOLOHH_16500 yecJ -1.0 -1.4 Uncharacterized protein YecJ compare
NOLOHH_18420 quuQ -1.0 -2.7 Prophage antitermination Q-like protein QuuQ compare
NOLOHH_14485 nuoG -1.0 -3.3 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_18800 lsrF -1.0 -1.5 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
NOLOHH_18545 -1.0 -2.3 phage minor tail protein G compare
NOLOHH_10655 qseC -1.0 -4.6 two-component system sensor histidine kinase QseC compare
NOLOHH_23145 galE -1.0 -2.8 UDP-glucose 4-epimerase GalE compare
NOLOHH_21050 -1.0 -0.7 DUF1425 domain-containing protein compare
NOLOHH_22910 ninG -1.0 -2.8 Protein ninG compare
NOLOHH_18070 rsxB -1.0 -0.8 electron transport complex subunit RsxB compare
NOLOHH_02845 aceE -1.0 -1.7 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_19350 mokB -0.9 -1.7 IS3 family transposase compare
NOLOHH_16495 azuC -0.9 -3.1 stress response protein AzuC compare
NOLOHH_13115 shoB -0.9 -1.0 Small toxic protein ShoB compare
NOLOHH_19835 racC -0.9 -1.2 Protein RacC compare
NOLOHH_19080 narU -0.9 -2.2 nitrate/nitrite transporter NarU compare
NOLOHH_16735 znuB -0.9 -2.4 zinc ABC transporter permease subunit ZnuB compare
NOLOHH_19515 ydbL -0.9 -1.8 Uncharacterized protein YdbL compare
NOLOHH_12705 ygaP -0.9 -1.3 thiosulfate sulfurtransferase YgaP compare
NOLOHH_11120 yggT -0.9 -0.8 osmotic shock tolerance protein YggT compare
NOLOHH_21380 cgsE -0.9 -0.8 curli production assembly/transport protein CsgE compare
NOLOHH_24085 cusR -0.9 -2.6 copper response regulator transcription factor CusR compare
NOLOHH_13865 crr -0.9 -0.8 PTS glucose transporter subunit IIA compare
NOLOHH_01535 proC -0.9 -3.1 pyrroline-5-carboxylate reductase compare
NOLOHH_22820 -0.9 -3.0 Phage-tail-NK domain-containing protein compare
NOLOHH_18255 clcB -0.9 -1.3 voltage-gated ClC-type chloride channel ClcB compare
NOLOHH_13415 guaA -0.9 -1.7 glutamine-hydrolyzing GMP synthase compare
NOLOHH_19785 -0.9 -2.0 DUF977 domain-containing protein compare
NOLOHH_00360 -0.9 -4.7 relaxase/mobilization nuclease compare
NOLOHH_21055 hinT -0.9 -1.1 purine nucleoside phosphoramidase compare
NOLOHH_19960 mppA -0.9 -1.7 murein tripeptide ABC transporter substrate-binding protein MppA compare
NOLOHH_17175 yeaQ -0.9 -1.7 UPF0410 protein YeaQ compare
NOLOHH_16505 ftnB -0.9 -1.0 non-heme ferritin-like protein compare
NOLOHH_09940 pnp -0.9 -4.3 polyribonucleotide nucleotidyltransferase compare
NOLOHH_23265 ybgE -0.9 -1.1 cyd operon protein YbgE compare
NOLOHH_22525 mntR -0.9 -1.9 manganese-binding transcriptional regulator MntR compare
NOLOHH_06110 -0.9 -1.3 hypothetical protein compare
NOLOHH_22285 artQ -0.9 -2.1 arginine ABC transporter permease ArtQ compare
NOLOHH_09730 ptsN -0.9 -1.2 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_15255 yehP -0.8 -2.3 Uncharacterized protein YehP compare
NOLOHH_00915 allA -0.8 -1.1 ureidoglycolate lyase compare
NOLOHH_16360 yedF -0.8 -1.6 sulfurtransferase-like selenium metabolism protein YedF compare
NOLOHH_22335 ybjN -0.8 -1.6 Uncharacterized protein YbjN compare
NOLOHH_13185 glyA -0.8 -2.2 serine hydroxymethyltransferase compare
NOLOHH_06395 rfaH -0.8 -4.2 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_13310 hscA -0.8 -1.3 Fe-S protein assembly chaperone HscA compare
NOLOHH_16845 zwf -0.8 -1.0 glucose-6-phosphate dehydrogenase compare
NOLOHH_19370 cybB -0.8 -2.0 cytochrome b561 compare
NOLOHH_11920 -0.8 -1.4 DUF2509 domain-containing protein compare
NOLOHH_21865 ycbU -0.8 -2.2 Uncharacterized fimbrial-like protein YcbU compare
NOLOHH_07640 cysE -0.8 -0.8 serine O-acetyltransferase compare
NOLOHH_13765 eutK -0.8 -2.3 ethanolamine utilization microcompartment protein EutK compare
NOLOHH_05965 pfkA -0.8 -3.1 6-phosphofructokinase compare
NOLOHH_11940 recD -0.8 -2.9 exodeoxyribonuclease V subunit alpha compare
NOLOHH_24770 -0.8 -1.0 conjugal transfer protein TrbE compare
NOLOHH_04190 yjgA -0.8 -3.9 ribosome-associated protein compare
NOLOHH_21675 cbdX -0.8 -1.0 cytochrome bd-II oxidase subunit CbdX compare
NOLOHH_22435 dgcI -0.8 -1.4 putative diguanylate cyclase DgcI compare
NOLOHH_20715 -0.8 -1.1 hypothetical protein compare
NOLOHH_07015 pstC -0.8 -2.0 phosphate ABC transporter permease PstC compare
NOLOHH_08775 -0.8 -2.8 NfuA family Fe-S biogenesis protein compare
NOLOHH_17835 -0.8 -0.7 Ferredoxin compare
NOLOHH_14760 rcsB -0.8 -1.7 transcriptional regulator RcsB compare
NOLOHH_06915 mioC -0.8 -3.6 FMN-binding protein MioC compare
NOLOHH_05230 plsB -0.8 -0.9 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_23495 ybfE -0.8 -2.3 LexA regulated protein compare
NOLOHH_14095 yfdV -0.8 -1.5 transporter YfdV compare
NOLOHH_10640 ygiN -0.8 -1.2 putative quinol monooxygenase YgiN compare
NOLOHH_19045 yddM -0.8 -1.0 HigA family addiction module antitoxin compare
NOLOHH_20670 dhaL -0.8 -1.1 dihydroxyacetone kinase subunit DhaL compare
NOLOHH_02170 tnp-ISAs1 -0.8 -1.3 ISAs1 family transposase compare
NOLOHH_16135 rfaF -0.8 -1.5 Glycosyltransferase family 9 (heptosyltransferase) compare
NOLOHH_15975 pduJ -0.7 -0.9 propanediol utilization microcompartment protein PduJ compare
NOLOHH_23735 rlmH -0.7 -0.8 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
NOLOHH_11490 fldB -0.7 -2.8 flavodoxin FldB compare
NOLOHH_13630 ypfN -0.7 -0.9 UPF0370 protein YpfN compare
NOLOHH_17145 dmlA -0.7 -1.3 multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase compare
NOLOHH_15455 gatZ -0.7 -1.1 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_20195 yciZ -0.7 -1.2 UPF0509 protein YciZ compare
NOLOHH_15130 yeiS -0.7 -2.0 Uncharacterized protein YeiS compare
NOLOHH_12165 -0.7 -1.0 LemA family compare
NOLOHH_16340 fliG -0.7 -1.3 flagellar motor switch protein FliG compare
NOLOHH_22915 -0.7 -2.1 hypothetical protein compare
NOLOHH_08375 pitA -0.7 -2.4 inorganic phosphate transporter PitA compare
NOLOHH_22310 ybjO -0.7 -1.2 Inner membrane protein YbjO compare
NOLOHH_15505 parE -0.7 -0.7 type II toxin-antitoxin system RelE/ParE family toxin compare
NOLOHH_14510 nuoL -0.7 -2.9 NADH-quinone oxidoreductase subunit L compare
NOLOHH_00485 -0.7 -3.2 Phage-related protein, tail assembly protein I compare
NOLOHH_12005 ygdD -0.7 -2.3 UPF0382 inner membrane protein YgdD conserved
NOLOHH_04075 yjgN -0.7 -2.3 Inner membrane protein YjgN compare
NOLOHH_20680 treA -0.7 -1.4 alpha,alpha-trehalase compare
NOLOHH_09300 zntR -0.7 -2.1 Zn(2+)-responsive transcriptional regulator compare
NOLOHH_10555 glgS -0.7 -0.9 cell surface composition regulator GlgS compare
NOLOHH_00350 -0.7 -3.1 TriA protein compare
NOLOHH_22905 ninH -0.7 -1.9 Protein ninH compare
NOLOHH_24440 -0.7 -3.1 hypothetical protein compare
NOLOHH_05695 sthA -0.7 -3.2 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_21035 nagZ -0.7 -1.6 beta-N-acetylhexosaminidase compare
NOLOHH_04005 Leu_trna -0.7 -0.9 tRNA-Leu(caa) compare
NOLOHH_21850 pyrD -0.7 -2.0 quinone-dependent dihydroorotate dehydrogenase compare
NOLOHH_00315 -0.7 -4.1 Cnjugal protein Pilx7 compare
NOLOHH_14845 napB -0.7 -1.2 nitrate reductase cytochrome c-type subunit compare
NOLOHH_16355 yedK -0.7 -1.2 Abasic site processing protein YedK compare
NOLOHH_22070 pflB -0.7 -2.2 formate C-acetyltransferase compare
NOLOHH_16335 fliH -0.7 -0.7 flagellar assembly protein FliH compare
NOLOHH_15940 -0.7 -1.6 propanediol utilization protein compare
NOLOHH_16035 cobU -0.7 -1.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
NOLOHH_22570 glnQ -0.7 -1.2 glutamine ABC transporter ATP-binding protein GlnQ compare
NOLOHH_00015 -0.7 -5.1 Type IV secretion system protein virB1 compare
NOLOHH_22845 -0.7 -2.0 phage capsid protein compare
NOLOHH_18780 uxaB -0.7 -1.3 tagaturonate reductase compare
NOLOHH_07670 -0.7 -1.6 DUF3251 domain-containing protein compare
NOLOHH_06520 -0.7 -0.8 DUF3289 domain-containing protein compare
NOLOHH_06220 typA -0.7 -4.4 ribosome-dependent GTPase TypA compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms