Experiment set5S538 for Escherichia coli ECOR27

Compare to:

Bas72

200 most important genes:

  gene name fitness t score description  
NOLOHH_13300 iscA -4.4 -3.0 iron-sulfur cluster assembly protein IscA compare
NOLOHH_05830 metJ -3.9 -2.6 met regulon transcriptional regulator MetJ compare
NOLOHH_02185 ydcD -3.8 -1.5 Uncharacterized protein YdcD compare
NOLOHH_06530 corA -3.4 -2.3 magnesium/cobalt transporter CorA compare
NOLOHH_08900 aroK -3.4 -1.9 shikimate kinase AroK compare
NOLOHH_14075 ypdI -3.3 -1.9 colanic acid biosynthesis lipoprotein YpdI compare
NOLOHH_24475 -3.1 -1.7 pilus assembly protein compare
NOLOHH_18800 lsrF -2.5 -2.5 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
NOLOHH_19045 yddM -2.4 -2.8 HigA family addiction module antitoxin compare
NOLOHH_21130 yceD -2.4 -3.2 23S rRNA accumulation protein YceD compare
NOLOHH_11425 ubiI -2.3 -2.2 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_01380 pgpA -2.3 -1.8 phosphatidylglycerophosphatase A compare
NOLOHH_14810 yojO -2.3 -1.6 Uncharacterized protein YojO compare
NOLOHH_02510 skp -2.1 -2.4 molecular chaperone Skp compare
NOLOHH_22085 ycaN -2.0 -1.6 Uncharacterized HTH-type transcriptional regulator YcaN compare
NOLOHH_17015 yebO -1.9 -2.1 Uncharacterized protein YebO compare
NOLOHH_02290 yafU -1.9 -4.1 Putative inner membrane protein YafU compare
NOLOHH_19640 -1.9 -2.9 Phage tail tube protein compare
NOLOHH_18855 fimA -1.8 -1.2 type 1 fimbrial major subunit FimA compare
NOLOHH_13355 ndk -1.8 -1.9 nucleoside-diphosphate kinase compare
NOLOHH_02845 aceE -1.8 -1.2 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_11495 xerD -1.7 -2.3 site-specific tyrosine recombinase XerD compare
NOLOHH_18070 rsxB -1.7 -1.3 electron transport complex subunit RsxB compare
NOLOHH_08495 yhhL -1.7 -1.8 DUF1145 domain-containing protein compare
NOLOHH_06665 wzyE -1.7 -6.0 ECA oligosaccharide polymerase compare
NOLOHH_05815 metL -1.7 -9.1 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_17530 ybcI -1.7 -1.9 metal-dependent hydrolase compare
NOLOHH_23315 sucA -1.6 -1.6 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_24675 finO -1.6 -8.1 Fertility inhibition protein compare
NOLOHH_19095 narW -1.6 -1.4 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_04005 Leu_trna -1.6 -1.1 tRNA-Leu(caa) compare
NOLOHH_18730 marC -1.6 -2.0 NAAT family transporter MarC compare
NOLOHH_01270 clpP -1.5 -2.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_17665 ppsA -1.5 -2.0 phosphoenolpyruvate synthase compare
NOLOHH_14535 -1.5 -2.3 ElaD/SseL family deubiquitinase compare
NOLOHH_12545 recA -1.5 -2.8 recombinase RecA compare
NOLOHH_18240 ynfL -1.5 -1.4 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_18130 uidB -1.5 -2.9 glucuronide transporter compare
NOLOHH_09695 arcB -1.5 -4.2 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_20285 yciK -1.5 -1.5 YciK family oxidoreductase compare
NOLOHH_09730 ptsN -1.5 -2.1 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_06920 mnmG -1.4 -3.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_00445 -1.4 -3.4 peptidyl-arginine deiminase compare
NOLOHH_23510 fur -1.4 -1.7 ferric iron uptake transcriptional regulator compare
NOLOHH_15505 parE -1.4 -1.5 type II toxin-antitoxin system RelE/ParE family toxin compare
NOLOHH_17055 -1.4 -1.6 Cytoplasmic protein compare
NOLOHH_00565 -1.4 -1.5 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_07125 -1.4 -3.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_24820 -1.4 -1.5 Conjugal transfer protein TrbD compare
NOLOHH_22695 ybhL -1.4 -2.5 Inhibitor of apoptosis-promoting Bax1 compare
NOLOHH_00705 gam -1.3 -1.7 Host-nuclease inhibitor protein gam compare
NOLOHH_22960 -1.3 -3.3 Bacteriophage CII protein compare
NOLOHH_21200 flgC -1.3 -1.5 flagellar basal body rod protein FlgC compare
NOLOHH_09835 obgE -1.3 -1.0 GTPase ObgE compare
NOLOHH_11230 tkt -1.3 -1.7 transketolase compare
NOLOHH_00385 -1.3 -1.6 hypothetical protein compare
NOLOHH_18920 pqqL -1.3 -2.1 putative zinc protease PqqL compare
NOLOHH_05965 pfkA -1.3 -4.4 6-phosphofructokinase compare
NOLOHH_05225 dgkA -1.3 -2.9 diacylglycerol kinase compare
NOLOHH_21335 mdoC -1.3 -2.5 glucans biosynthesis protein MdoC compare
NOLOHH_23480 pgm -1.3 -2.6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_16325 fliJ -1.3 -1.9 flagella biosynthesis chaperone FliJ compare
NOLOHH_10655 qseC -1.3 -6.0 two-component system sensor histidine kinase QseC compare
NOLOHH_12805 rnfH -1.2 -1.2 RnfH family protein compare
NOLOHH_17625 btuE -1.2 -1.7 bifunctional thioredoxin/glutathione peroxidase compare
NOLOHH_14300 usg -1.2 -3.5 aspartate-semialdehyde dehydrogenase compare
NOLOHH_14465 nuoB -1.2 -4.5 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_22285 artQ -1.2 -2.5 arginine ABC transporter permease ArtQ compare
NOLOHH_23245 tolA -1.2 -3.8 cell envelope integrity protein TolA compare
NOLOHH_18065 rsxC -1.2 -3.0 electron transport complex subunit RsxC compare
NOLOHH_20665 dhaK -1.2 -1.7 dihydroxyacetone kinase subunit DhaK compare
NOLOHH_14690 yfaE -1.2 -1.4 ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE compare
NOLOHH_09590 argR -1.2 -2.6 transcriptional regulator ArgR compare
NOLOHH_14520 nuoN -1.2 -3.5 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_15160 yohP -1.2 -1.0 protein YohP compare
NOLOHH_16940 yebW -1.2 -2.5 Uncharacterized protein YebW compare
NOLOHH_01245 ppiD -1.2 -1.7 peptidylprolyl isomerase compare
NOLOHH_19305 tehA -1.2 -1.1 dicarboxylate transporter/tellurite-resistance protein TehA compare
NOLOHH_21560 yccJ -1.1 -1.7 Uncharacterized protein YccJ compare
NOLOHH_14470 nuoC -1.1 -3.3 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_07560 rfaB -1.1 -4.1 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_20820 ymgG -1.1 -0.9 UPF0757 protein YmgG compare
NOLOHH_13765 eutK -1.1 -2.8 ethanolamine utilization microcompartment protein EutK compare
NOLOHH_13055 rseA -1.1 -1.7 anti-sigma-E factor RseA compare
NOLOHH_24695 vapB -1.1 -1.9 toxin-antitoxin system antitoxin VapB compare
NOLOHH_20735 fadR -1.1 -1.2 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_13310 hscA -1.1 -1.7 Fe-S protein assembly chaperone HscA compare
NOLOHH_11415 pepP -1.1 -3.1 Xaa-Pro aminopeptidase compare
NOLOHH_22440 pdeI -1.1 -1.4 putative cyclic di-GMP phosphodiesterase PdeI compare
NOLOHH_06675 wzxE -1.1 -3.0 lipid III flippase WzxE compare
NOLOHH_09845 greA -1.1 -1.2 transcription elongation factor GreA compare
NOLOHH_08720 glpD -1.1 -4.5 glycerol-3-phosphate dehydrogenase compare
NOLOHH_10640 ygiN -1.0 -0.9 putative quinol monooxygenase YgiN compare
NOLOHH_21555 wrbA -1.0 -2.1 NAD(P)H:quinone oxidoreductase compare
NOLOHH_13175 glnB -1.0 -2.3 nitrogen regulatory protein P-II compare
NOLOHH_20295 rluB -1.0 -2.4 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_23250 tolR -1.0 -2.3 colicin uptake protein TolR compare
NOLOHH_14455 -1.0 -1.1 hypothetical protein compare
NOLOHH_08775 -1.0 -2.7 NfuA family Fe-S biogenesis protein compare
NOLOHH_23320 sdhB -1.0 -2.7 succinate dehydrogenase iron-sulfur subunit SdhB compare
NOLOHH_00760 fimZ -1.0 -2.8 fimbria biosynthesis transcriptional regulator FimZ compare
NOLOHH_22880 -1.0 -5.0 phage holin, lambda family compare
NOLOHH_18915 yddB -1.0 -1.1 Uncharacterized protein YddB compare
NOLOHH_09940 pnp -1.0 -6.2 polyribonucleotide nucleotidyltransferase compare
NOLOHH_24290 ssb -1.0 -2.0 single-stranded DNA-binding protein compare
NOLOHH_00940 -1.0 -1.2 RHS repeat protein compare
NOLOHH_03605 yjjG -1.0 -2.1 pyrimidine 5'-nucleotidase compare
NOLOHH_24620 -1.0 -1.6 ISSfl4 ORF1 compare
NOLOHH_19905 smrA -1.0 -2.7 DNA endonuclease SmrA compare
NOLOHH_18100 malY -1.0 -2.1 bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY compare
NOLOHH_24810 traV -1.0 -1.3 type IV conjugative transfer system lipoprotein TraV compare
NOLOHH_07540 rfaP -0.9 -3.6 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_24115 -0.9 -0.8 hypothetical protein compare
NOLOHH_19680 -0.9 -2.5 Phage Mu protein F like protein compare
NOLOHH_14305 truA -0.9 -2.8 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_14515 nuoM -0.9 -3.2 NADH-quinone oxidoreductase subunit M compare
NOLOHH_05490 hupA -0.9 -1.0 DNA-binding protein HU-alpha compare
NOLOHH_17425 astA -0.9 -1.7 arginine N-succinyltransferase compare
NOLOHH_13185 glyA -0.9 -2.1 serine hydroxymethyltransferase compare
NOLOHH_06550 xerC -0.9 -1.3 tyrosine recombinase XerC compare
NOLOHH_20015 ycjW -0.9 -0.8 Uncharacterized HTH-type transcriptional regulator YcjW compare
NOLOHH_13560 hyfA -0.9 -3.1 hydrogenase 4 subunit HyfA compare
NOLOHH_01255 lon_P403L -0.9 -3.9 Lon protease compare
NOLOHH_04950 phnO -0.9 -2.1 aminoalkylphosphonate N-acetyltransferase compare
NOLOHH_01630 yaiS -0.9 -1.6 Uncharacterized deacetylase YaiS compare
NOLOHH_13035 srmB -0.9 -4.4 ATP-dependent RNA helicase SrmB compare
NOLOHH_16385 fliS -0.9 -2.1 flagellar export chaperone FliS compare
NOLOHH_21410 ghrA -0.9 -2.3 glyoxylate/hydroxypyruvate reductase GhrA compare
NOLOHH_19010 gntT -0.9 -1.3 transporter compare
NOLOHH_21165 flgJ -0.9 -2.0 flagellar assembly peptidoglycan hydrolase FlgJ compare
NOLOHH_18380 -0.9 -0.8 DUF977 domain-containing protein compare
NOLOHH_16285 fliR -0.9 -0.9 flagellar type III secretion system protein FliR compare
NOLOHH_00315 -0.9 -3.0 Cnjugal protein Pilx7 compare
NOLOHH_06220 typA -0.9 -5.9 ribosome-dependent GTPase TypA compare
NOLOHH_23980 fepE -0.9 -2.2 LPS O-antigen length regulator compare
NOLOHH_24815 trbG -0.9 -1.1 conjugal transfer protein TrbG compare
NOLOHH_14485 nuoG -0.8 -3.3 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_07530 rfaQ -0.8 -5.1 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_18155 fumC -0.8 -0.7 class II fumarate hydratase compare
NOLOHH_11490 fldB -0.8 -3.2 flavodoxin FldB compare
NOLOHH_00515 -0.8 -2.5 Phage minor tail protein G compare
NOLOHH_18305 ynfA -0.8 -0.8 YnfA family protein compare
NOLOHH_23995 fes -0.8 -2.2 enterobactin/ferric enterobactin esterase compare
NOLOHH_17365 nudG -0.8 -0.7 CTP pyrophosphohydrolase compare
NOLOHH_21550 ymdF -0.8 -1.6 Uncharacterized protein YmdF compare
NOLOHH_22875 -0.8 -4.0 Endolysin compare
NOLOHH_03335 -0.8 -1.3 Fimbrial protein compare
NOLOHH_22570 glnQ -0.8 -1.3 glutamine ABC transporter ATP-binding protein GlnQ compare
NOLOHH_00360 -0.8 -4.4 relaxase/mobilization nuclease compare
NOLOHH_07015 pstC -0.8 -1.9 phosphate ABC transporter permease PstC compare
NOLOHH_23930 entH -0.8 -1.8 proofreading thioesterase EntH compare
NOLOHH_04165 treC -0.8 -2.7 alpha,alpha-phosphotrehalase compare
NOLOHH_21360 csgA -0.8 -1.7 curlin major subunit CsgA compare
NOLOHH_20775 ycgN -0.8 -1.0 YcgN family cysteine cluster protein compare
NOLOHH_08270 hdeA -0.8 -2.1 acid-activated periplasmic chaperone HdeA compare
NOLOHH_14780 apbE -0.8 -1.4 FAD:protein FMN transferase ApbE compare
NOLOHH_02690 dksA -0.8 -1.6 RNA polymerase-binding protein DksA compare
NOLOHH_03170 surA -0.8 -2.3 peptidylprolyl isomerase SurA compare
NOLOHH_21480 efeB -0.8 -1.6 iron uptake transporter deferrochelatase/peroxidase subunit compare
NOLOHH_01340 yajQ -0.8 -1.7 nucleotide binding protein YajQ compare
NOLOHH_13415 guaA -0.8 -1.5 glutamine-hydrolyzing GMP synthase compare
NOLOHH_16770 -0.8 -0.6 TrmB family transcriptional regulator compare
NOLOHH_06730 trxA -0.8 -1.6 thioredoxin TrxA compare
NOLOHH_04420 ulaR -0.8 -3.4 HTH-type transcriptional regulator UlaR compare
NOLOHH_03860 hypT -0.8 -2.3 hypochlorite stress DNA-binding transcriptional regulator HypT compare
NOLOHH_17810 pykF -0.8 -1.4 pyruvate kinase PykF compare
NOLOHH_16845 zwf -0.8 -0.9 glucose-6-phosphate dehydrogenase compare
NOLOHH_14160 Arg_trna -0.8 -1.1 tRNA-Arg(cct) compare
NOLOHH_21185 flgF -0.8 -1.4 flagellar basal-body rod protein FlgF compare
NOLOHH_17620 btuC -0.8 -1.3 vitamin B12 ABC transporter permease BtuC compare
NOLOHH_05230 plsB -0.8 -0.9 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_11940 recD -0.8 -2.8 exodeoxyribonuclease V subunit alpha compare
NOLOHH_11005 gspJ -0.7 -2.1 general secretion pathway protein J compare
NOLOHH_21880 elfD -0.7 -0.7 putative fimbrial chaperone protein ElfD compare
NOLOHH_02170 tnp-ISAs1 -0.7 -1.2 ISAs1 family transposase compare
NOLOHH_23425 ybfC -0.7 -1.0 Uncharacterized protein YbfC compare
NOLOHH_23350 fimA -0.7 -0.9 type 1 fimbrial protein compare
NOLOHH_13075 lepA -0.7 -1.9 translation elongation factor 4 compare
NOLOHH_18960 ddpA -0.7 -0.8 putative D,D-dipeptide-binding periplasmic protein DdpA compare
NOLOHH_20460 galU -0.7 -0.9 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_16580 tap -0.7 -2.2 methyl-accepting chemotaxis protein IV compare
NOLOHH_07720 yibA -0.7 -2.0 Protein YibA compare
NOLOHH_14350 hisJ -0.7 -1.5 histidine ABC transporter substrate-binding protein HisJ compare
NOLOHH_07010 pstS -0.7 -2.9 phosphate ABC transporter substrate-binding protein PstS compare
NOLOHH_06385 fre -0.7 -4.0 NAD(P)H-flavin reductase compare
NOLOHH_11105 hemW -0.7 -3.3 radical SAM family heme chaperone HemW compare
NOLOHH_20940 potB -0.7 -0.8 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_19330 ydcJ -0.7 -1.1 Uncharacterized protein YdcJ compare
NOLOHH_09610 zapG -0.7 -2.6 Z-ring associated protein ZapG compare
NOLOHH_10590 zupT -0.7 -3.3 zinc transporter ZupT compare
NOLOHH_22050 serC -0.7 -3.9 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_11705 -0.7 -1.9 PrgH/EprH family type III secretion apparatus protein compare
NOLOHH_16700 -0.7 -1.6 putative transcriptional regulatory protein YebC compare
NOLOHH_03190 apaH -0.7 -2.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_04510 hflK -0.7 -2.0 FtsH protease activity modulator HflK compare
NOLOHH_09725 rapZ -0.7 -2.5 RNase adapter RapZ compare
NOLOHH_14630 nudI -0.7 -1.4 nucleoside triphosphatase NudI compare
NOLOHH_18060 rsxD -0.7 -1.5 electron transport complex subunit RsxD compare
NOLOHH_04965 rpiB -0.7 -1.7 bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB compare
NOLOHH_08375 pitA -0.7 -2.7 inorganic phosphate transporter PitA compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms