Experiment set5S531 for Escherichia coli ECOR27

Compare to:

Bas36

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -5.0 -21.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -4.9 -8.2 O-antigen ligase RfaL compare
NOLOHH_07555 rfaJ -4.8 -4.7 glucosyltransferase compare
NOLOHH_07545 waaO -4.2 -4.1 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_15730 -4.2 -11.1 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07560 rfaB -4.1 -7.8 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_23145 galE -4.1 -5.5 UDP-glucose 4-epimerase GalE compare
NOLOHH_06675 wzxE -3.2 -4.9 lipid III flippase WzxE compare
NOLOHH_06665 wzyE -3.1 -7.9 ECA oligosaccharide polymerase compare
NOLOHH_11425 ubiI -3.0 -2.1 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_13300 iscA -2.7 -2.1 iron-sulfur cluster assembly protein IscA compare
NOLOHH_12545 recA -2.7 -4.1 recombinase RecA compare
NOLOHH_24495 -2.6 -1.6 lngG compare
NOLOHH_06530 corA -2.5 -5.4 magnesium/cobalt transporter CorA compare
NOLOHH_00565 -2.5 -2.1 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_20460 galU -2.4 -1.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_16290 fliQ -2.3 -2.7 flagellar biosynthesis protein FliQ compare
NOLOHH_23315 sucA -2.3 -2.6 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_07535 rfaG -2.3 -5.2 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_23480 pgm -2.3 -3.6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_24675 finO -2.3 -11.3 Fertility inhibition protein compare
NOLOHH_07125 -2.1 -3.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_20895 nudJ -2.1 -1.8 phosphatase NudJ compare
NOLOHH_21940 aspC -2.1 -2.5 aspartate transaminase compare
NOLOHH_06920 mnmG -1.9 -4.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_02285 hcp1,tssD1 -1.9 -1.6 type VI secretion system protein, Hcp family compare
NOLOHH_24400 -1.9 -4.0 nuclease PIN compare
NOLOHH_19620 gp18 -1.9 -1.4 phage minor tail protein L compare
NOLOHH_05965 pfkA -1.8 -6.2 6-phosphofructokinase compare
NOLOHH_11245 -1.8 -1.6 Putative oxidoreductase compare
NOLOHH_05815 metL -1.8 -8.9 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_02185 ydcD -1.8 -1.3 Uncharacterized protein YdcD compare
NOLOHH_11495 xerD -1.7 -3.0 site-specific tyrosine recombinase XerD compare
NOLOHH_11365 rpiA -1.7 -2.4 ribose-5-phosphate isomerase RpiA compare
NOLOHH_00445 -1.7 -4.0 peptidyl-arginine deiminase compare
NOLOHH_24795 trbI -1.6 -1.7 type-F conjugative transfer system protein TrbI compare
NOLOHH_21130 yceD -1.6 -2.8 23S rRNA accumulation protein YceD compare
NOLOHH_13070 rseC -1.6 -3.8 SoxR-reducing system protein RseC compare
NOLOHH_02845 aceE -1.6 -2.4 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_06550 xerC -1.6 -2.2 tyrosine recombinase XerC compare
NOLOHH_16845 zwf -1.6 -1.8 glucose-6-phosphate dehydrogenase compare
NOLOHH_04165 treC -1.6 -4.1 alpha,alpha-phosphotrehalase compare
NOLOHH_07710 yibG -1.5 -1.5 Uncharacterized protein YibG compare
NOLOHH_01270 clpP -1.5 -2.9 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_00940 -1.5 -1.8 RHS repeat protein compare
NOLOHH_19250 ydcS -1.5 -2.0 Bifunctional polyhydroxybutyrate synthase / ABC transporter periplasmic binding protein compare
NOLOHH_21095 fabF -1.5 -2.9 beta-ketoacyl-ACP synthase II compare
NOLOHH_16505 ftnB -1.4 -1.5 non-heme ferritin-like protein compare
NOLOHH_13310 hscA -1.4 -2.3 Fe-S protein assembly chaperone HscA compare
NOLOHH_10640 ygiN -1.4 -1.3 putative quinol monooxygenase YgiN compare
NOLOHH_07575 rfaF -1.4 -1.3 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_21050 -1.4 -1.3 DUF1425 domain-containing protein compare
NOLOHH_13415 guaA -1.4 -2.4 glutamine-hydrolyzing GMP synthase compare
NOLOHH_11775 yqeJ -1.4 -1.1 Uncharacterized protein YqeJ compare
NOLOHH_13640 arsC -1.4 -2.0 ArsC family reductase compare
NOLOHH_07015 pstC -1.3 -3.4 phosphate ABC transporter permease PstC compare
NOLOHH_18545 -1.3 -3.2 phage minor tail protein G compare
NOLOHH_19095 narW -1.3 -1.8 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_22905 ninH -1.3 -3.5 Protein ninH compare
NOLOHH_14340 ubiX -1.3 -2.2 flavin prenyltransferase UbiX compare
NOLOHH_05490 hupA -1.3 -1.4 DNA-binding protein HU-alpha compare
NOLOHH_19785 -1.3 -2.5 DUF977 domain-containing protein compare
NOLOHH_14505 nuoK -1.2 -2.2 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_09695 arcB -1.2 -4.3 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_19485 paaB -1.2 -1.8 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_12805 rnfH -1.2 -1.8 RnfH family protein compare
NOLOHH_20940 potB -1.2 -2.0 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_20170 -1.2 -1.4 DUF559 domain-containing protein compare
NOLOHH_22440 pdeI -1.2 -1.1 putative cyclic di-GMP phosphodiesterase PdeI compare
NOLOHH_23250 tolR -1.2 -2.7 colicin uptake protein TolR compare
NOLOHH_23485 seqA -1.2 -1.4 replication initiation negative regulator SeqA compare
NOLOHH_18060 rsxD -1.2 -2.9 electron transport complex subunit RsxD compare
NOLOHH_19330 ydcJ -1.2 -1.7 Uncharacterized protein YdcJ compare
NOLOHH_09610 zapG -1.2 -3.2 Z-ring associated protein ZapG compare
NOLOHH_09875 secG -1.2 -1.5 preprotein translocase subunit SecG compare
NOLOHH_24760 trbA -1.1 -1.7 conjugal transfer protein TrbA compare
NOLOHH_18820 lsrA -1.1 -1.0 autoinducer 2 ABC transporter ATP-binding protein LsrA compare
NOLOHH_23790 crcB -1.1 -2.3 fluoride efflux transporter CrcB compare
NOLOHH_23510 fur -1.1 -1.8 ferric iron uptake transcriptional regulator compare
NOLOHH_13355 ndk -1.1 -2.8 nucleoside-diphosphate kinase compare
NOLOHH_19420 ydbD -1.1 -1.9 Uncharacterized protein YdbD compare
NOLOHH_20205 osmB -1.1 -1.4 osmotically-inducible lipoprotein OsmB compare
NOLOHH_04460 -1.1 -1.3 DUF2491 domain-containing protein compare
NOLOHH_23035 -1.1 -2.6 DUF5405 domain-containing protein compare
NOLOHH_17355 gdhA -1.1 -2.5 NADP-specific glutamate dehydrogenase compare
NOLOHH_20775 ycgN -1.1 -1.3 YcgN family cysteine cluster protein compare
NOLOHH_09730 ptsN -1.1 -2.2 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_05225 dgkA -1.1 -2.8 diacylglycerol kinase compare
NOLOHH_03190 apaH -1.1 -4.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_23245 tolA -1.1 -3.8 cell envelope integrity protein TolA compare
NOLOHH_19010 gntT -1.1 -1.9 transporter compare
NOLOHH_00385 -1.1 -3.0 hypothetical protein compare
NOLOHH_20785 ycgL -1.1 -1.6 Protein YcgL compare
NOLOHH_07540 rfaP -1.1 -3.7 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_17545 yniA -1.0 -1.9 putative ketoamine kinase YniA compare
NOLOHH_18080 ydgK -1.0 -1.0 Inner membrane protein YdgK compare
NOLOHH_23995 fes -1.0 -2.9 enterobactin/ferric enterobactin esterase compare
NOLOHH_18025 pdxY -1.0 -2.0 pyridoxal kinase PdxY compare
NOLOHH_01935 rclC -1.0 -1.1 reactive chlorine species resistance protein RclC compare
NOLOHH_08775 -1.0 -2.9 NfuA family Fe-S biogenesis protein compare
NOLOHH_08375 pitA -1.0 -3.6 inorganic phosphate transporter PitA compare
NOLOHH_01255 lon_P403L -1.0 -5.1 Lon protease compare
NOLOHH_06395 rfaH -1.0 -2.6 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_08900 aroK -1.0 -1.1 shikimate kinase AroK compare
NOLOHH_05900 zapB -1.0 -3.0 septal ring assembly protein ZapB compare
NOLOHH_06300 dsbA -1.0 -2.4 thiol:disulfide interchange protein DsbA compare
NOLOHH_19045 yddM -1.0 -1.3 HigA family addiction module antitoxin compare
NOLOHH_17130 yeaX -1.0 -2.1 carnitine monooxygenase subunit YeaX compare
NOLOHH_02690 dksA -1.0 -3.1 RNA polymerase-binding protein DksA compare
NOLOHH_02510 skp -1.0 -1.7 molecular chaperone Skp compare
NOLOHH_21360 csgA -1.0 -2.5 curlin major subunit CsgA compare
NOLOHH_15315 yehE -1.0 -1.8 Uncharacterized protein YehE compare
NOLOHH_17905 purR -1.0 -3.1 HTH-type transcriptional repressor PurR compare
NOLOHH_23060 -1.0 -1.9 IS1 orfB compare
NOLOHH_16770 -0.9 -1.7 TrmB family transcriptional regulator compare
NOLOHH_07955 yiaG -0.9 -2.1 HTH-type transcriptional regulator compare
NOLOHH_17845 ydhT -0.9 -2.5 protein YdhT compare
NOLOHH_14465 nuoB -0.9 -3.8 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_13055 rseA -0.9 -1.7 anti-sigma-E factor RseA compare
NOLOHH_09940 pnp -0.9 -5.7 polyribonucleotide nucleotidyltransferase compare
NOLOHH_05830 metJ -0.9 -1.5 met regulon transcriptional regulator MetJ compare
NOLOHH_20455 hns -0.9 -1.6 DNA-binding transcriptional regulator H-NS compare
NOLOHH_19845 recT -0.9 -1.4 recombination protein RecT compare
NOLOHH_15505 parE -0.9 -1.4 type II toxin-antitoxin system RelE/ParE family toxin compare
NOLOHH_03360 nhaA -0.9 -2.0 Na+/H+ antiporter NhaA compare
NOLOHH_23875 uspG -0.9 -1.6 universal stress protein UspG compare
NOLOHH_13075 lepA -0.9 -2.3 translation elongation factor 4 compare
NOLOHH_18960 ddpA -0.9 -1.4 putative D,D-dipeptide-binding periplasmic protein DdpA compare
NOLOHH_17075 nudL -0.9 -1.5 CoA pyrophosphatase compare
NOLOHH_13990 ypeD -0.9 -1.3 Protein YpeD compare
NOLOHH_20830 -0.9 -0.8 Autotransporter domain-containing protein compare
NOLOHH_20425 -0.9 -1.2 hypothetical protein compare
NOLOHH_11110 rdgB -0.9 -2.8 XTP/dITP diphosphatase compare
NOLOHH_11740 pbl -0.9 -2.0 Putative peptidoglycan-binding-like protein compare
NOLOHH_08800 feoC -0.9 -1.9 [Fe-S]-dependent transcriptional repressor FeoC compare
NOLOHH_22875 -0.9 -3.0 Endolysin compare
NOLOHH_18955 ddpX -0.9 -1.5 D-alanyl-D-alanine dipeptidase compare
NOLOHH_18065 rsxC -0.9 -3.1 electron transport complex subunit RsxC compare
NOLOHH_16335 fliH -0.8 -1.0 flagellar assembly protein FliH compare
NOLOHH_18555 -0.8 -1.8 Tail component of prophage CP-933X compare
NOLOHH_11490 fldB -0.8 -3.8 flavodoxin FldB compare
NOLOHH_01905 -0.8 -1.7 Uncharacterized protein YkgH compare
NOLOHH_09955 deaD -0.8 -2.0 ATP-dependent RNA helicase DeaD compare
NOLOHH_20670 dhaL -0.8 -0.9 dihydroxyacetone kinase subunit DhaL compare
NOLOHH_08905 aroB -0.8 -3.5 3-dehydroquinate synthase compare
NOLOHH_06590 cyaA -0.8 -4.9 class I adenylate cyclase compare
NOLOHH_08720 glpD -0.8 -3.9 glycerol-3-phosphate dehydrogenase compare
NOLOHH_18240 ynfL -0.8 -1.2 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_18855 fimA -0.8 -0.8 type 1 fimbrial major subunit FimA compare
NOLOHH_15815 hisH -0.8 -2.1 imidazole glycerol phosphate synthase subunit HisH compare
NOLOHH_16355 yedK -0.8 -1.5 Abasic site processing protein YedK compare
NOLOHH_20505 narJ -0.8 -0.8 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_15345 rcnA -0.8 -2.6 nickel/cobalt efflux protein RcnA compare
NOLOHH_14125 emrY -0.8 -2.2 multidrug efflux MFS transporter permease subunit EmrY compare
NOLOHH_22960 -0.8 -1.6 Bacteriophage CII protein compare
NOLOHH_13430 yfgG -0.8 -0.8 Uncharacterized protein YfgG compare
NOLOHH_14510 nuoL -0.8 -3.6 NADH-quinone oxidoreductase subunit L compare
NOLOHH_06385 fre -0.8 -4.6 NAD(P)H-flavin reductase compare
NOLOHH_00535 fII -0.8 -1.1 Head-tail connector protein FII compare
NOLOHH_09485 yhdT -0.8 -1.9 Uncharacterized membrane protein YhdT compare
NOLOHH_13035 srmB -0.8 -3.9 ATP-dependent RNA helicase SrmB compare
NOLOHH_17790 sufS -0.8 -1.5 cysteine desulfurase SufS compare
NOLOHH_22050 serC -0.8 -3.7 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_23265 ybgE -0.8 -2.0 cyd operon protein YbgE compare
NOLOHH_17255 yeaD -0.8 -1.0 Putative glucose-6-phosphate 1-epimerase compare
NOLOHH_16870 yebF -0.8 -1.7 Protein YebF compare
NOLOHH_03600 prfC -0.8 -5.8 peptide chain release factor 3 compare
NOLOHH_15245 yehR -0.8 -2.5 Uncharacterized lipoprotein YehR compare
NOLOHH_18975 dppD -0.8 -1.0 ABC transporter ATP-binding protein compare
NOLOHH_04490 nsrR -0.8 -3.8 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_14855 ccmA -0.8 -2.2 cytochrome c biogenesis heme-transporting ATPase CcmA compare
NOLOHH_22860 -0.8 -3.0 terminase small subunit compare
NOLOHH_13865 crr -0.8 -0.8 PTS glucose transporter subunit IIA compare
NOLOHH_11100 -0.8 -2.4 Bacterial extracellular solute-binding protein, family 7 compare
NOLOHH_07530 rfaQ -0.8 -5.2 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_21845 zapC -0.8 -1.9 cell division protein ZapC compare
NOLOHH_20700 emtA -0.8 -0.9 membrane-bound lytic murein transglycosylase EmtA compare
NOLOHH_09850 yhbY -0.8 -2.5 ribosome assembly RNA-binding protein YhbY compare
NOLOHH_16435 yecF -0.8 -1.6 DUF2594 domain-containing protein compare
NOLOHH_23105 pgl -0.8 -3.5 6-phosphogluconolactonase compare
NOLOHH_15490 yegR -0.8 -0.8 Uncharacterized protein YegR compare
NOLOHH_05005 ytcA -0.7 -1.6 Uncharacterized protein YtcA compare
NOLOHH_19680 -0.7 -2.1 Phage Mu protein F like protein compare
NOLOHH_14760 rcsB -0.7 -1.4 transcriptional regulator RcsB compare
NOLOHH_18130 uidB -0.7 -1.4 glucuronide transporter compare
NOLOHH_20865 bluF -0.7 -0.8 blue light-responsive regulator BluF compare
NOLOHH_22675 ybhQ -0.7 -1.5 Inner membrane protein YbhQ compare
NOLOHH_17225 dgcJ -0.7 -1.7 diguanylate cyclase DgcJ compare
NOLOHH_04525 miaA -0.7 -0.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_18245 mlc -0.7 -0.8 DNA-binding transcriptional repressor Mlc compare
NOLOHH_13115 shoB -0.7 -0.9 Small toxic protein ShoB compare
NOLOHH_17365 nudG -0.7 -0.9 CTP pyrophosphohydrolase compare
NOLOHH_18730 marC -0.7 -0.8 NAAT family transporter MarC compare
NOLOHH_21150 rne -0.7 -2.8 ribonuclease E compare
NOLOHH_20815 -0.7 -1.2 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_04420 ulaR -0.7 -3.7 HTH-type transcriptional regulator UlaR compare
NOLOHH_17690 ydiQ -0.7 -1.1 electron transfer flavoprotein compare
NOLOHH_21740 rlmI -0.7 -2.4 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI compare
NOLOHH_19750 -0.7 -1.2 antiterminator compare
NOLOHH_16225 yedJ -0.7 -2.6 phosphohydrolase compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms