Experiment set5S516 for Bosea sp. OAE506

Compare to:

Ying_all64 rep B; time point 3

200 most detrimental genes:

  gene name fitness t score description  
ABIE41_RS19340 +1.0 4.5 hypothetical protein compare
ABIE41_RS19380 +0.9 4.1 DUF4376 domain-containing protein compare
ABIE41_RS19440 +0.9 7.3 hypothetical protein compare
ABIE41_RS18075 +0.8 1.4 multicopper oxidase family protein compare
ABIE41_RS19480 +0.8 5.4 hypothetical protein compare
ABIE41_RS13070 +0.8 2.4 hypothetical protein compare
ABIE41_RS19425 +0.8 6.5 Rha family transcriptional regulator compare
ABIE41_RS17460 +0.7 1.3 hypothetical protein compare
ABIE41_RS16260 +0.7 1.6 hypothetical protein compare
ABIE41_RS02355 +0.7 1.1 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS17145 +0.7 1.7 metal-dependent hydrolase compare
ABIE41_RS12710 +0.7 1.4 hypothetical protein compare
ABIE41_RS19405 +0.6 2.5 phage baseplate assembly protein compare
ABIE41_RS15130 +0.6 1.9 flagellar motor protein MotB compare
ABIE41_RS04410 +0.6 2.4 WecB/TagA/CpsF family glycosyltransferase compare
ABIE41_RS11985 +0.6 1.6 hypothetical protein compare
ABIE41_RS19345 +0.6 2.1 HNH endonuclease signature motif containing protein compare
ABIE41_RS21390 +0.6 1.6 urease subunit gamma compare
ABIE41_RS19560 +0.6 3.4 hypothetical protein compare
ABIE41_RS13395 +0.6 4.0 hypothetical protein compare
ABIE41_RS20645 +0.6 2.7 tripartite tricarboxylate transporter TctB family protein compare
ABIE41_RS19375 +0.6 2.2 N-acetylmuramidase domain-containing protein compare
ABIE41_RS03705 +0.6 1.3 Flp pilus assembly protein CpaB compare
ABIE41_RS19555 +0.6 1.6 LexA family transcriptional regulator compare
ABIE41_RS23145 +0.6 1.9 DUF2093 domain-containing protein compare
ABIE41_RS13385 +0.5 2.4 flagellar type III secretion system pore protein FliP compare
ABIE41_RS08030 +0.5 0.9 glutaredoxin 3 compare
ABIE41_RS22645 +0.5 2.3 phasin compare
ABIE41_RS01630 +0.5 1.4 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS09980 +0.5 2.3 magnesium protoporphyrin IX methyltransferase compare
ABIE41_RS19430 +0.5 2.4 hypothetical protein compare
ABIE41_RS10945 +0.5 3.0 hypothetical protein compare
ABIE41_RS08985 +0.5 1.5 MAPEG family protein compare
ABIE41_RS22180 +0.5 1.9 large conductance mechanosensitive channel protein MscL compare
ABIE41_RS12355 +0.5 2.5 flagellar hook-length control protein FliK compare
ABIE41_RS16165 +0.5 1.3 hypothetical protein compare
ABIE41_RS03120 +0.5 1.2 hypothetical protein compare
ABIE41_RS23300 +0.5 1.1 hypothetical protein compare
ABIE41_RS13425 +0.5 1.8 flagellar basal body P-ring formation chaperone FlgA compare
ABIE41_RS13400 +0.5 3.3 DUF6468 domain-containing protein compare
ABIE41_RS21835 +0.5 1.8 hypothetical protein compare
ABIE41_RS04450 +0.5 2.0 transcriptional regulator compare
ABIE41_RS13360 +0.5 3.7 flagellar biosynthesis protein FliQ compare
ABIE41_RS13485 +0.5 1.3 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS19355 +0.5 3.0 hypothetical protein compare
ABIE41_RS13285 +0.5 3.0 rod-binding protein compare
ABIE41_RS13035 +0.5 1.5 M20 family metallopeptidase compare
ABIE41_RS13410 +0.5 2.5 flagellar basal body-associated protein FliL compare
ABIE41_RS05090 +0.5 1.7 hypothetical protein compare
ABIE41_RS13450 +0.5 2.0 catalase family protein compare
ABIE41_RS13790 +0.4 2.8 proteasome-type protease compare
ABIE41_RS14075 +0.4 2.1 membrane protein insertion efficiency factor YidD compare
ABIE41_RS14140 +0.4 2.7 lytic transglycosylase domain-containing protein compare
ABIE41_RS14425 +0.4 1.5 hypothetical protein compare
ABIE41_RS13295 +0.4 1.8 flagellar assembly protein FliX compare
ABIE41_RS11335 +0.4 0.9 VUT family protein compare
ABIE41_RS15200 +0.4 0.9 hypothetical protein compare
ABIE41_RS10775 +0.4 1.3 PilZ domain-containing protein compare
ABIE41_RS02475 +0.4 2.5 dihydrolipoamide acetyltransferase family protein compare
ABIE41_RS19390 +0.4 1.6 hypothetical protein compare
ABIE41_RS19360 +0.4 1.7 hypothetical protein compare
ABIE41_RS10810 +0.4 0.9 hypothetical protein compare
ABIE41_RS15065 +0.4 0.8 DUF1127 domain-containing protein compare
ABIE41_RS21710 +0.4 1.9 Lrp/AsnC ligand binding domain-containing protein compare
ABIE41_RS15475 +0.4 1.3 response regulator compare
ABIE41_RS22685 +0.4 2.0 tripartite tricarboxylate transporter substrate-binding protein compare
ABIE41_RS10170 +0.4 1.0 metallophosphoesterase compare
ABIE41_RS05945 +0.4 2.5 ABC transporter ATP-binding protein compare
ABIE41_RS02930 +0.4 1.9 methyltransferase domain-containing protein compare
ABIE41_RS18440 +0.4 2.1 SDR family oxidoreductase compare
ABIE41_RS22295 +0.4 2.3 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS12915 +0.4 1.3 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein compare
ABIE41_RS22620 +0.4 1.2 alpha/beta hydrolase compare
ABIE41_RS23285 +0.4 3.1 EAL domain-containing protein compare
ABIE41_RS14355 +0.4 1.5 type VI secretion system ImpA family N-terminal domain-containing protein compare
ABIE41_RS00260 +0.4 1.9 DUF2306 domain-containing protein compare
ABIE41_RS10960 +0.4 3.1 flagellar protein export ATPase FliI compare
ABIE41_RS08880 +0.4 1.2 ATP-binding protein compare
ABIE41_RS13420 +0.4 1.7 flagellar basal-body rod protein FlgG compare
ABIE41_RS16295 +0.4 1.6 enoyl-CoA hydratase/isomerase family protein compare
ABIE41_RS23620 +0.4 2.9 PRC-barrel domain-containing protein compare
ABIE41_RS19385 +0.4 3.2 hypothetical protein compare
ABIE41_RS00820 +0.4 1.1 DUF1232 domain-containing protein compare
ABIE41_RS15135 +0.4 2.6 flagellar motor stator protein MotA compare
ABIE41_RS13390 +0.4 3.1 hypothetical protein compare
ABIE41_RS20550 +0.4 1.1 LacI family DNA-binding transcriptional regulator compare
ABIE41_RS20250 +0.4 0.7 ankyrin repeat domain-containing protein compare
ABIE41_RS13375 +0.4 2.7 flagellar basal body rod protein FlgB compare
ABIE41_RS22835 +0.4 1.4 GFA family protein compare
ABIE41_RS12070 +0.4 1.5 methyl-accepting chemotaxis protein compare
ABIE41_RS09415 +0.4 1.1 hypothetical protein compare
ABIE41_RS18395 +0.4 0.7 LysR family transcriptional regulator compare
ABIE41_RS13505 +0.4 0.6 Spy/CpxP family protein refolding chaperone compare
ABIE41_RS19415 +0.4 2.4 hypothetical protein compare
ABIE41_RS19470 +0.4 1.6 hypothetical protein compare
ABIE41_RS07380 +0.4 1.1 hypothetical protein compare
ABIE41_RS10880 +0.4 1.6 flagellar motor switch protein FliG compare
ABIE41_RS16420 +0.4 0.7 LysR family transcriptional regulator compare
ABIE41_RS20130 +0.4 1.6 thiol-disulfide oxidoreductase DCC family protein compare
ABIE41_RS04445 +0.4 1.8 ATP-dependent protease ATPase subunit HslU compare
ABIE41_RS20225 +0.4 1.6 VOC family protein compare
ABIE41_RS22455 +0.4 0.8 DUF6456 domain-containing protein compare
ABIE41_RS10290 +0.4 1.1 DUF1295 domain-containing protein compare
ABIE41_RS13930 +0.4 1.1 zinc-finger domain-containing protein compare
ABIE41_RS16185 +0.4 0.9 type II 3-dehydroquinate dehydratase compare
ABIE41_RS02925 +0.4 1.3 GtrA family protein compare
ABIE41_RS22245 +0.4 1.7 SOS response-associated peptidase compare
ABIE41_RS13290 +0.4 1.4 flagellar basal body P-ring protein FlgI compare
ABIE41_RS20630 +0.4 1.2 phosphonate ABC transporter, permease protein PhnE compare
ABIE41_RS17435 +0.4 1.0 gephyrin-like molybdotransferase Glp compare
ABIE41_RS07810 +0.4 2.2 transporter substrate-binding domain-containing protein compare
ABIE41_RS03725 +0.4 2.6 pilus assembly protein N-terminal domain-containing protein compare
ABIE41_RS08875 +0.4 1.7 polyphosphate kinase 2 compare
ABIE41_RS13405 +0.4 2.5 flagellar motor switch protein FliM compare
ABIE41_RS17510 +0.4 1.6 DUF4131 domain-containing protein compare
ABIE41_RS13415 +0.3 2.4 flagellar basal-body rod protein FlgF compare
ABIE41_RS01935 +0.3 0.8 hypothetical protein compare
ABIE41_RS22625 +0.3 0.5 DUF1150 domain-containing protein compare
ABIE41_RS10895 +0.3 2.7 sigma-54 dependent transcriptional regulator compare
ABIE41_RS11180 +0.3 1.7 TrmH family RNA methyltransferase compare
ABIE41_RS17060 +0.3 1.7 hypothetical protein compare
ABIE41_RS21875 +0.3 0.5 carboxymuconolactone decarboxylase family protein compare
ABIE41_RS11205 +0.3 1.7 S-methyl-5'-thioadenosine phosphorylase compare
ABIE41_RS10815 +0.3 1.6 hypothetical protein compare
ABIE41_RS09850 +0.3 1.2 squalene/phytoene synthase family protein compare
ABIE41_RS13950 +0.3 1.6 LysR family transcriptional regulator compare
ABIE41_RS07970 +0.3 2.5 acetyl-CoA acetyltransferase compare
ABIE41_RS21545 +0.3 1.3 trypsin-like serine protease compare
ABIE41_RS06465 +0.3 1.2 hypothetical protein compare
ABIE41_RS00060 +0.3 0.6 type II toxin-antitoxin system VapC family toxin compare
ABIE41_RS19620 +0.3 1.4 hypothetical protein compare
ABIE41_RS17455 +0.3 1.1 hypothetical protein compare
ABIE41_RS19100 +0.3 1.7 hypothetical protein compare
ABIE41_RS07755 +0.3 2.4 serine protease compare
ABIE41_RS15545 +0.3 2.1 FAD binding domain-containing protein compare
ABIE41_RS19850 +0.3 1.5 DUF2336 domain-containing protein compare
ABIE41_RS14805 +0.3 1.8 FliM/FliN family flagellar motor switch protein compare
ABIE41_RS09695 +0.3 0.9 folate-binding protein YgfZ compare
ABIE41_RS23425 +0.3 1.3 hypothetical protein compare
ABIE41_RS13820 +0.3 1.9 type I methionyl aminopeptidase compare
ABIE41_RS15580 +0.3 0.9 Cu(I)-responsive transcriptional regulator compare
ABIE41_RS03795 +0.3 1.7 sulfite exporter TauE/SafE family protein compare
ABIE41_RS00795 +0.3 0.5 hypothetical protein compare
ABIE41_RS07125 +0.3 2.4 HNH endonuclease compare
ABIE41_RS21335 +0.3 2.1 CmpA/NrtA family ABC transporter substrate-binding protein compare
ABIE41_RS10080 +0.3 0.9 YeeE/YedE family protein compare
ABIE41_RS16335 +0.3 1.4 (2Fe-2S)-binding protein compare
ABIE41_RS24045 +0.3 1.8 FAD-dependent oxidoreductase compare
ABIE41_RS10655 +0.3 2.2 aldehyde dehydrogenase family protein compare
ABIE41_RS13240 +0.3 2.1 flagellar hook-basal body complex protein compare
ABIE41_RS19315 +0.3 1.0 SMR family transporter compare
ABIE41_RS19450 +0.3 2.1 hypothetical protein compare
ABIE41_RS19410 +0.3 1.6 hypothetical protein compare
ABIE41_RS14825 +0.3 2.1 DUF2177 family protein compare
ABIE41_RS14680 +0.3 1.5 tripartite tricarboxylate transporter substrate-binding protein compare
ABIE41_RS05810 +0.3 0.8 WD40 repeat domain-containing protein compare
ABIE41_RS17785 +0.3 1.1 50S ribosomal protein L9 compare
ABIE41_RS05600 +0.3 1.0 ABC transporter permease compare
ABIE41_RS19420 +0.3 1.8 DNA circularization N-terminal domain-containing protein compare
ABIE41_RS21485 +0.3 1.5 hypothetical protein compare
ABIE41_RS22410 +0.3 2.1 hypothetical protein compare
ABIE41_RS11485 +0.3 1.3 glutathione S-transferase compare
ABIE41_RS24065 +0.3 1.4 quinone-dependent dihydroorotate dehydrogenase compare
ABIE41_RS16225 +0.3 1.6 hypothetical protein compare
ABIE41_RS18090 +0.3 1.9 phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) compare
ABIE41_RS10705 +0.3 1.7 SOS response-associated peptidase compare
ABIE41_RS14695 +0.3 0.7 hypothetical protein compare
ABIE41_RS17440 +0.3 0.6 transcriptional repressor LexA compare
ABIE41_RS02480 +0.3 2.4 alpha-ketoacid dehydrogenase subunit beta compare
ABIE41_RS18295 +0.3 0.6 ArsC family reductase compare
ABIE41_RS13180 +0.3 1.5 DMT family transporter compare
ABIE41_RS14165 +0.3 1.0 hypothetical protein compare
ABIE41_RS05590 +0.3 2.0 DUF3426 domain-containing protein compare
ABIE41_RS00185 +0.3 1.1 OsmC family protein compare
ABIE41_RS19460 +0.3 2.4 phage tail sheath subtilisin-like domain-containing protein compare
ABIE41_RS01645 +0.3 1.8 TIGR00730 family Rossman fold protein compare
ABIE41_RS00365 +0.3 1.9 DUF2188 domain-containing protein compare
ABIE41_RS20440 +0.3 1.0 LysR family transcriptional regulator compare
ABIE41_RS15320 +0.3 2.1 FAD-dependent oxidoreductase compare
ABIE41_RS11240 +0.3 0.8 GntR family transcriptional regulator compare
ABIE41_RS05025 +0.3 1.4 aldolase/citrate lyase family protein compare
ABIE41_RS13370 +0.3 2.1 flagellar basal body rod protein FlgC compare
ABIE41_RS11305 +0.3 1.1 hypothetical protein compare
ABIE41_RS13750 +0.3 1.5 XdhC family protein compare
ABIE41_RS22405 +0.3 2.0 DUF1214 domain-containing protein compare
ABIE41_RS16595 +0.3 1.4 ABC transporter ATP-binding protein compare
ABIE41_RS09505 +0.3 1.3 TetR/AcrR family transcriptional regulator compare
ABIE41_RS11100 +0.3 0.7 hypothetical protein compare
ABIE41_RS15185 +0.3 1.0 IMP dehydrogenase compare
ABIE41_RS19110 +0.3 1.4 hypothetical protein compare
ABIE41_RS12115 +0.3 2.0 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS15275 +0.3 1.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
ABIE41_RS19395 +0.3 2.0 baseplate J/gp47 family protein compare
ABIE41_RS23225 +0.3 1.0 DUF2019 domain-containing protein compare
ABIE41_RS14095 +0.3 1.5 GDYXXLXY domain-containing protein compare
ABIE41_RS10915 +0.3 2.2 flagellar biosynthesis protein FlhA compare
ABIE41_RS22275 +0.3 0.7 lipid kinase compare
ABIE41_RS23840 +0.3 1.7 M20 family metallopeptidase compare
ABIE41_RS15480 +0.3 1.7 helix-turn-helix domain-containing protein compare
ABIE41_RS12055 +0.3 1.2 acyl-CoA thioesterase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Ying_all64 in Bosea sp. OAE506

For carbon source Ying_all64 across organisms