Experiment set5S502 for Escherichia coli ECOR27

Compare to:

Bas66

200 most important genes:

  gene name fitness t score description  
NOLOHH_09630 sspA -5.9 -4.1 stringent starvation protein A compare
NOLOHH_20455 hns -5.4 -3.7 DNA-binding transcriptional regulator H-NS compare
NOLOHH_16320 fliK -5.4 -5.2 flagellar hook length control protein FliK compare
NOLOHH_07545 waaO -5.3 -3.6 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_07565 rfaL -5.1 -7.8 O-antigen ligase RfaL compare
NOLOHH_09845 greA -5.0 -2.1 transcription elongation factor GreA compare
NOLOHH_23315 sucA -4.8 -3.3 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_06665 wzyE -4.7 -7.8 ECA oligosaccharide polymerase compare
NOLOHH_08340 gorA -4.6 -12.8 glutathione-disulfide reductase compare
NOLOHH_06220 typA -4.5 -18.1 ribosome-dependent GTPase TypA compare
NOLOHH_16335 fliH -4.5 -3.0 flagellar assembly protein FliH compare
NOLOHH_21095 fabF -4.4 -4.2 beta-ketoacyl-ACP synthase II compare
NOLOHH_23235 pal -4.4 -4.2 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_23245 tolA -4.4 -4.2 cell envelope integrity protein TolA compare
NOLOHH_09835 obgE -4.2 -1.8 GTPase ObgE compare
NOLOHH_23480 pgm -4.2 -2.9 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_21325 mdoH -4.2 -10.5 glucans biosynthesis glucosyltransferase MdoH compare
NOLOHH_23145 galE -4.2 -5.7 UDP-glucose 4-epimerase GalE compare
NOLOHH_13390 bamB -4.1 -6.3 outer membrane protein assembly factor BamB compare
NOLOHH_16325 fliJ -4.1 -2.3 flagella biosynthesis chaperone FliJ compare
NOLOHH_21130 yceD -4.1 -2.8 23S rRNA accumulation protein YceD compare
NOLOHH_16610 flhA -4.1 -6.2 flagellar biosynthesis protein FlhA compare
NOLOHH_07560 rfaB -4.0 -8.1 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_21195 flgD -4.0 -6.1 flagellar hook assembly protein FlgD compare
NOLOHH_16400 fliA -4.0 -6.0 RNA polymerase sigma factor FliA compare
NOLOHH_21165 flgJ -4.0 -2.7 flagellar assembly peptidoglycan hydrolase FlgJ compare
NOLOHH_19325 opgD -4.0 -7.1 glucan biosynthesis protein OpgD compare
NOLOHH_06530 corA -4.0 -2.7 magnesium/cobalt transporter CorA compare
NOLOHH_20465 rssB -3.9 -2.7 two-component system response regulator RssB compare
NOLOHH_06675 wzxE -3.9 -3.8 lipid III flippase WzxE compare
NOLOHH_08720 glpD -3.9 -7.9 glycerol-3-phosphate dehydrogenase compare
NOLOHH_16310 fliM -3.9 -2.7 flagellar motor switch protein FliM compare
NOLOHH_23240 tolB -3.9 -7.8 Tol-Pal system protein TolB compare
NOLOHH_16845 zwf -3.8 -2.2 glucose-6-phosphate dehydrogenase compare
NOLOHH_10610 tolC -3.8 -4.1 outer membrane channel protein TolC compare
NOLOHH_21330 mdoG -3.7 -8.7 glucans biosynthesis protein MdoG compare
NOLOHH_16975 prc -3.7 -9.8 carboxy terminal-processing peptidase compare
NOLOHH_21185 flgF -3.6 -3.0 flagellar basal-body rod protein FlgF compare
NOLOHH_07555 rfaJ -3.6 -3.5 glucosyltransferase compare
NOLOHH_02315 rnhA -3.6 -5.9 ribonuclease HI compare
NOLOHH_14200 sixA -3.6 -3.4 phosphohistidine phosphatase SixA compare
NOLOHH_03145 rapA -3.6 -19.3 RNA polymerase-associated protein RapA compare
NOLOHH_20745 dsbB -3.5 -4.1 disulfide bond formation protein DsbB compare
NOLOHH_12805 rnfH -3.5 -2.7 RnfH family protein compare
NOLOHH_23730 rsfS -3.5 -4.9 ribosome silencing factor compare
NOLOHH_14780 apbE -3.4 -3.3 FAD:protein FMN transferase ApbE compare
NOLOHH_21175 flgH -3.4 -5.6 flagellar basal body L-ring protein FlgH compare
NOLOHH_10655 qseC -3.4 -8.9 two-component system sensor histidine kinase QseC compare
NOLOHH_03170 surA -3.4 -4.0 peptidylprolyl isomerase SurA compare
NOLOHH_16545 flhC -3.4 -5.0 flagellar transcriptional regulator FlhC compare
NOLOHH_09470 dusB -3.3 -10.4 tRNA dihydrouridine synthase DusB compare
NOLOHH_13185 glyA -3.3 -5.3 serine hydroxymethyltransferase compare
NOLOHH_13055 rseA -3.3 -2.3 anti-sigma-E factor RseA compare
NOLOHH_21170 flgI -3.3 -3.2 flagellar basal body P-ring protein FlgI compare
NOLOHH_09695 arcB -3.3 -5.0 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_16295 fliP -3.3 -5.4 flagellar type III secretion system pore protein FliP compare
NOLOHH_16605 flhB -3.2 -4.2 flagellar biosynthesis protein FlhB compare
NOLOHH_21020 ndh -3.2 -6.8 NADH-quinone dehydrogenase compare
NOLOHH_14305 truA -3.2 -5.3 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_23250 tolR -3.2 -3.8 colicin uptake protein TolR compare
NOLOHH_05885 hslU -3.1 -4.7 HslU--HslV peptidase ATPase subunit compare
NOLOHH_05490 hupA -3.1 -2.1 DNA-binding protein HU-alpha compare
NOLOHH_05225 dgkA -3.1 -4.7 diacylglycerol kinase compare
NOLOHH_02510 skp -3.1 -2.3 molecular chaperone Skp compare
NOLOHH_06550 xerC -3.1 -2.9 tyrosine recombinase XerC compare
NOLOHH_12625 emrR -3.1 -5.1 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
NOLOHH_23105 pgl -3.1 -7.8 6-phosphogluconolactonase compare
NOLOHH_16285 fliR -3.0 -1.7 flagellar type III secretion system protein FliR compare
NOLOHH_02690 dksA -3.0 -5.4 RNA polymerase-binding protein DksA compare
NOLOHH_14340 ubiX -3.0 -2.0 flavin prenyltransferase UbiX compare
NOLOHH_03020 rsmH -3.0 -4.0 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
NOLOHH_16305 fliN -2.9 -2.4 flagellar motor switch protein FliN compare
NOLOHH_16970 proQ -2.9 -5.4 RNA chaperone ProQ compare
NOLOHH_14160 Arg_trna -2.9 -3.9 tRNA-Arg(cct) compare
NOLOHH_18145 manA -2.9 -3.4 mannose-6-phosphate isomerase compare
NOLOHH_16345 fliF -2.9 -7.5 flagellar M-ring protein FliF compare
NOLOHH_17545 yniA -2.9 -3.3 putative ketoamine kinase YniA compare
NOLOHH_20225 lapA -2.9 -1.7 lipopolysaccharide assembly protein LapA compare
NOLOHH_05815 metL -2.8 -10.0 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_08175 pdeH -2.8 -14.1 cyclic-guanylate-specific phosphodiesterase compare
NOLOHH_09905 nusA -2.8 -4.3 Transcription termination/antitermination protein NusA compare
NOLOHH_06300 dsbA -2.8 -3.3 thiol:disulfide interchange protein DsbA compare
NOLOHH_06920 mnmG -2.8 -3.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_09730 ptsN -2.7 -3.7 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_20735 fadR -2.7 -1.8 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_23310 odhB -2.7 -1.8 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_06405 tatC -2.7 -11.7 Sec-independent protein translocase subunit TatC compare
NOLOHH_21180 flgG -2.7 -5.0 flagellar basal-body rod protein FlgG compare
NOLOHH_21200 flgC -2.7 -2.0 flagellar basal body rod protein FlgC compare
NOLOHH_21210 flgA -2.7 -2.6 flagellar basal body P-ring formation protein FlgA compare
NOLOHH_23995 fes -2.7 -4.7 enterobactin/ferric enterobactin esterase compare
NOLOHH_22050 serC -2.7 -6.9 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_20015 ycjW -2.6 -2.2 Uncharacterized HTH-type transcriptional regulator YcjW compare
NOLOHH_13865 crr -2.6 -1.5 PTS glucose transporter subunit IIA compare
NOLOHH_20895 nudJ -2.6 -1.8 phosphatase NudJ compare
NOLOHH_11145 gshB -2.6 -8.7 glutathione synthase compare
NOLOHH_13070 rseC -2.6 -4.2 SoxR-reducing system protein RseC compare
NOLOHH_05965 pfkA -2.6 -6.3 6-phosphofructokinase compare
NOLOHH_05830 metJ -2.5 -2.7 met regulon transcriptional regulator MetJ compare
NOLOHH_00445 -2.5 -1.7 peptidyl-arginine deiminase compare
NOLOHH_06590 cyaA -2.5 -10.4 class I adenylate cyclase compare
NOLOHH_04005 Leu_trna -2.5 -1.7 tRNA-Leu(caa) compare
NOLOHH_12630 ygaH -2.5 -5.1 L-valine transporter subunit YgaH compare
NOLOHH_21190 flgE -2.5 -5.4 flagellar hook protein FlgE compare
NOLOHH_06415 tatA -2.4 -2.8 Sec-independent protein translocase subunit TatA compare
NOLOHH_24675 finO -2.4 -7.5 Fertility inhibition protein compare
NOLOHH_06715 wecA -2.4 -15.1 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_23545 nagA -2.4 -6.8 N-acetylglucosamine-6-phosphate deacetylase compare
NOLOHH_18060 rsxD -2.4 -3.6 electron transport complex subunit RsxD compare
NOLOHH_01255 lon_P403L -2.4 -8.3 Lon protease compare
NOLOHH_07610 envC -2.4 -10.1 murein hydrolase activator EnvC compare
NOLOHH_16330 fliI -2.3 -3.2 flagellum-specific ATP synthase FliI compare
NOLOHH_09400 Thr_trna -2.3 -2.1 tRNA-Thr(ggt) compare
NOLOHH_11495 xerD -2.3 -2.8 site-specific tyrosine recombinase XerD compare
NOLOHH_11490 fldB -2.3 -5.4 flavodoxin FldB compare
NOLOHH_08775 -2.3 -4.9 NfuA family Fe-S biogenesis protein compare
NOLOHH_03030 cra -2.3 -6.3 catabolite repressor/activator compare
NOLOHH_02845 aceE -2.3 -1.6 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_21380 cgsE -2.2 -1.3 curli production assembly/transport protein CsgE compare
NOLOHH_12600 gshA -2.2 -8.5 glutamate--cysteine ligase compare
NOLOHH_11365 rpiA -2.2 -2.5 ribose-5-phosphate isomerase RpiA compare
NOLOHH_12000 gcvA -2.2 -7.1 glycine cleavage system transcriptional regulator GcvA compare
NOLOHH_06395 rfaH -2.1 -7.1 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_16290 fliQ -2.1 -2.6 flagellar biosynthesis protein FliQ compare
NOLOHH_01275 tig -2.1 -5.0 trigger factor compare
NOLOHH_08900 aroK -2.1 -2.0 shikimate kinase AroK compare
NOLOHH_18070 rsxB -2.1 -2.3 electron transport complex subunit RsxB compare
NOLOHH_23735 rlmH -2.1 -1.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
NOLOHH_21045 lpoB -2.0 -3.6 penicillin-binding protein activator LpoB compare
NOLOHH_09085 slyD -2.0 -7.2 peptidylprolyl isomerase compare
NOLOHH_06410 tatB -2.0 -6.0 Sec-independent protein translocase protein TatB compare
NOLOHH_08905 aroB -2.0 -6.3 3-dehydroquinate synthase compare
NOLOHH_10020 diaA -2.0 -9.7 DnaA initiator-associating protein DiaA compare
NOLOHH_16340 fliG -2.0 -2.2 flagellar motor switch protein FliG compare
NOLOHH_17230 cdgI -2.0 -2.9 putative diguanylate cyclase CdgI compare
NOLOHH_14300 usg -2.0 -4.2 aspartate-semialdehyde dehydrogenase compare
NOLOHH_06695 rffG -2.0 -11.5 dTDP-glucose 4,6-dehydratase compare
NOLOHH_12635 ygaZ -1.9 -7.8 L-valine exporter subunit YgaZ compare
NOLOHH_21055 hinT -1.9 -1.8 purine nucleoside phosphoramidase compare
NOLOHH_07575 rfaF -1.9 -1.3 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_13100 pdxJ -1.9 -2.9 pyridoxine 5'-phosphate synthase compare
NOLOHH_11230 tkt -1.9 -2.4 transketolase compare
NOLOHH_13310 hscA -1.9 -2.7 Fe-S protein assembly chaperone HscA compare
NOLOHH_09635 sspB -1.8 -5.9 ClpXP protease specificity-enhancing factor compare
NOLOHH_18820 lsrA -1.8 -2.6 autoinducer 2 ABC transporter ATP-binding protein LsrA compare
NOLOHH_23260 ybgC -1.8 -3.4 tol-pal system-associated acyl-CoA thioesterase compare
NOLOHH_12660 proV -1.8 -7.0 glycine betaine/L-proline ABC transporter ATP-binding protein ProV compare
NOLOHH_01270 clpP -1.8 -3.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_09610 zapG -1.8 -4.7 Z-ring associated protein ZapG compare
NOLOHH_07125 -1.8 -3.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_12880 yfiR -1.8 -2.7 Protein YfiR compare
NOLOHH_24715 traS -1.8 -2.3 conjugal transfer entry exclusion protein TraS compare
NOLOHH_18065 rsxC -1.7 -4.6 electron transport complex subunit RsxC compare
NOLOHH_13285 iscR -1.7 -3.0 Fe-S cluster assembly transcriptional regulator IscR compare
NOLOHH_23000 ea10 -1.7 -1.6 Protein ea10 compare
NOLOHH_23510 fur -1.7 -2.2 ferric iron uptake transcriptional regulator compare
NOLOHH_13035 srmB -1.7 -6.2 ATP-dependent RNA helicase SrmB compare
NOLOHH_03190 apaH -1.7 -6.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_11185 speB -1.7 -6.2 agmatinase compare
NOLOHH_21815 pqiC -1.7 -2.7 membrane integrity-associated transporter subunit PqiC compare
NOLOHH_09725 rapZ -1.6 -6.1 RNase adapter RapZ compare
NOLOHH_14015 fryB -1.6 -2.0 PTS system fructose-like EIIB component 1 compare
NOLOHH_07440 rpoZ -1.6 -3.9 DNA-directed RNA polymerase subunit omega compare
NOLOHH_24235 -1.6 -1.2 conjugal transfer protein TraM compare
NOLOHH_02670 mrcB -1.6 -11.9 bifunctional glycosyl transferase/transpeptidase compare
NOLOHH_05175 alr -1.6 -8.7 alanine racemase compare
NOLOHH_12545 recA -1.6 -2.9 recombinase RecA compare
NOLOHH_12655 proW -1.6 -5.8 glycine betaine/L-proline ABC transporter permease ProW conserved
NOLOHH_22075 pflA -1.6 -1.9 pyruvate formate lyase 1-activating protein compare
NOLOHH_06525 -1.5 -2.0 DUF943 domain-containing protein compare
NOLOHH_18050 rsxE -1.5 -2.1 electron transport complex subunit RsxE compare
NOLOHH_16275 dsrB -1.5 -1.7 protein DsrB compare
NOLOHH_24290 ssb -1.5 -2.9 single-stranded DNA-binding protein compare
NOLOHH_19790 -1.5 -2.5 phage replisome organizer compare
NOLOHH_16435 yecF -1.5 -2.4 DUF2594 domain-containing protein compare
NOLOHH_08375 pitA -1.5 -5.0 inorganic phosphate transporter PitA compare
NOLOHH_03340 -1.5 -1.3 fimbrial family protein compare
NOLOHH_16750 mepM -1.4 -4.3 murein DD-endopeptidase MepM conserved
NOLOHH_13355 ndk -1.4 -2.2 nucleoside-diphosphate kinase compare
NOLOHH_08510 ftsE -1.4 -2.8 cell division ATP-binding protein FtsE compare
NOLOHH_09760 kdsC -1.4 -3.9 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
NOLOHH_15110 mglA -1.4 -2.0 galactose/methyl galactoside ABC transporter ATP-binding protein MglA compare
NOLOHH_16855 kdgA -1.4 -1.4 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_07690 mtlD -1.4 -4.4 mannitol-1-phosphate 5-dehydrogenase compare
NOLOHH_13365 rodZ -1.4 -4.5 cytoskeleton protein RodZ compare
NOLOHH_11775 yqeJ -1.4 -1.1 Uncharacterized protein YqeJ compare
NOLOHH_13160 qseE -1.4 -7.4 two component system sensor histidine kinase QseE/GlrK conserved
NOLOHH_11940 recD -1.4 -4.3 exodeoxyribonuclease V subunit alpha compare
NOLOHH_06385 fre -1.3 -6.9 NAD(P)H-flavin reductase compare
NOLOHH_21335 mdoC -1.3 -2.2 glucans biosynthesis protein MdoC compare
NOLOHH_19385 ydcF -1.3 -1.1 Protein YdcF compare
NOLOHH_18620 ydfJ -1.3 -1.5 Putative transporter YdfJ compare
NOLOHH_16230 dcm -1.3 -3.2 DNA-cytosine methyltransferase conserved
NOLOHH_17565 yniD -1.3 -1.0 Uncharacterized protein YniD compare
NOLOHH_00940 -1.3 -1.5 RHS repeat protein compare
NOLOHH_06605 hemX -1.3 -7.8 uroporphyrinogen-III C-methyltransferase compare
NOLOHH_04190 yjgA -1.3 -5.9 ribosome-associated protein compare
NOLOHH_16190 hiuH -1.3 -1.8 hydroxyisourate hydrolase compare
NOLOHH_11110 rdgB -1.2 -3.7 XTP/dITP diphosphatase compare
NOLOHH_07540 rfaP -1.2 -2.4 lipopolysaccharide core heptose(I) kinase RfaP compare


Specific Phenotypes

For 8 genes in this experiment

For phage Phage in Escherichia coli ECOR27

For phage Phage across organisms