Experiment set5S489 for Escherichia coli ECOR27

Compare to:

Bas65

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -6.3 -14.7 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_03145 rapA -6.1 -12.4 RNA polymerase-associated protein RapA compare
NOLOHH_07555 rfaJ -6.0 -4.1 glucosyltransferase compare
NOLOHH_07565 rfaL -6.0 -4.1 O-antigen ligase RfaL compare
NOLOHH_08175 pdeH -5.9 -15.8 cyclic-guanylate-specific phosphodiesterase compare
NOLOHH_22050 serC -5.9 -5.7 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_16320 fliK -5.8 -4.0 flagellar hook length control protein FliK compare
NOLOHH_07560 rfaB -5.7 -3.9 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_10655 qseC -5.7 -5.5 two-component system sensor histidine kinase QseC compare
NOLOHH_12000 gcvA -5.6 -7.7 glycine cleavage system transcriptional regulator GcvA compare
NOLOHH_09630 sspA -5.6 -3.9 stringent starvation protein A compare
NOLOHH_21180 flgG -5.6 -3.9 flagellar basal-body rod protein FlgG compare
NOLOHH_16330 fliI -5.5 -3.8 flagellum-specific ATP synthase FliI compare
NOLOHH_06220 typA -5.4 -14.3 ribosome-dependent GTPase TypA compare
NOLOHH_06405 tatC -5.4 -14.7 Sec-independent protein translocase subunit TatC compare
NOLOHH_21325 mdoH -5.3 -6.4 glucans biosynthesis glucosyltransferase MdoH compare
NOLOHH_10610 tolC -5.3 -3.7 outer membrane channel protein TolC compare
NOLOHH_09400 Thr_trna -5.3 -1.9 tRNA-Thr(ggt) compare
NOLOHH_21330 mdoG -5.3 -3.6 glucans biosynthesis protein MdoG compare
NOLOHH_21175 flgH -5.2 -3.6 flagellar basal body L-ring protein FlgH compare
NOLOHH_20455 hns -5.2 -3.6 DNA-binding transcriptional regulator H-NS compare
NOLOHH_16975 prc -5.2 -6.2 carboxy terminal-processing peptidase compare
NOLOHH_09470 dusB -5.2 -7.1 tRNA dihydrouridine synthase DusB compare
NOLOHH_21195 flgD -5.1 -3.5 flagellar hook assembly protein FlgD compare
NOLOHH_16345 fliF -5.0 -6.0 flagellar M-ring protein FliF compare
NOLOHH_21095 fabF -5.0 -3.4 beta-ketoacyl-ACP synthase II compare
NOLOHH_06665 wzyE -5.0 -5.9 ECA oligosaccharide polymerase compare
NOLOHH_08515 ftsX -5.0 -3.4 permease-like cell division protein FtsX compare
NOLOHH_15730 -4.9 -8.2 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_09845 greA -4.9 -1.8 transcription elongation factor GreA compare
NOLOHH_12625 emrR -4.9 -4.7 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
NOLOHH_16340 fliG -4.9 -3.4 flagellar motor switch protein FliG compare
NOLOHH_08720 glpD -4.9 -3.4 glycerol-3-phosphate dehydrogenase compare
NOLOHH_12805 rnfH -4.9 -3.3 RnfH family protein compare
NOLOHH_09635 sspB -4.8 -8.9 ClpXP protease specificity-enhancing factor compare
NOLOHH_20895 nudJ -4.8 -1.7 phosphatase NudJ compare
NOLOHH_19325 opgD -4.8 -3.3 glucan biosynthesis protein OpgD compare
NOLOHH_16610 flhA -4.7 -3.3 flagellar biosynthesis protein FlhA compare
NOLOHH_16545 flhC -4.7 -3.2 flagellar transcriptional regulator FlhC compare
NOLOHH_20295 rluB -4.7 -4.5 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_13390 bamB -4.6 -3.2 outer membrane protein assembly factor BamB compare
NOLOHH_05225 dgkA -4.6 -3.2 diacylglycerol kinase compare
NOLOHH_23315 sucA -4.5 -2.7 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_07610 envC -4.5 -13.9 murein hydrolase activator EnvC compare
NOLOHH_16605 flhB -4.4 -4.3 flagellar biosynthesis protein FlhB compare
NOLOHH_01255 lon_P403L -4.4 -7.4 Lon protease compare
NOLOHH_16400 fliA -4.3 -5.1 RNA polymerase sigma factor FliA compare
NOLOHH_08340 gorA -4.3 -12.1 glutathione-disulfide reductase compare
NOLOHH_23245 tolA -4.2 -2.9 cell envelope integrity protein TolA compare
NOLOHH_21185 flgF -4.2 -2.0 flagellar basal-body rod protein FlgF compare
NOLOHH_09905 nusA -4.2 -4.1 Transcription termination/antitermination protein NusA compare
NOLOHH_16335 fliH -4.2 -2.6 flagellar assembly protein FliH compare
NOLOHH_16290 fliQ -4.2 -2.4 flagellar biosynthesis protein FliQ compare
NOLOHH_23235 pal -4.2 -4.1 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_09610 zapG -4.2 -5.3 Z-ring associated protein ZapG compare
NOLOHH_23240 tolB -4.2 -5.0 Tol-Pal system protein TolB compare
NOLOHH_19620 gp18 -4.1 -1.5 phage minor tail protein L compare
NOLOHH_02690 dksA -4.1 -2.8 RNA polymerase-binding protein DksA compare
NOLOHH_21190 flgE -4.1 -2.8 flagellar hook protein FlgE compare
NOLOHH_09835 obgE -4.1 -1.5 GTPase ObgE compare
NOLOHH_13865 crr -4.1 -1.4 PTS glucose transporter subunit IIA compare
NOLOHH_05830 metJ -4.1 -2.5 met regulon transcriptional regulator MetJ compare
NOLOHH_07545 waaO -4.1 -3.9 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_20745 dsbB -4.0 -2.8 disulfide bond formation protein DsbB compare
NOLOHH_09730 ptsN -4.0 -2.8 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_16295 fliP -4.0 -4.8 flagellar type III secretion system pore protein FliP compare
NOLOHH_16325 fliJ -4.0 -2.0 flagella biosynthesis chaperone FliJ compare
NOLOHH_02315 rnhA -4.0 -6.1 ribonuclease HI compare
NOLOHH_01115 rsmS -4.0 -3.3 pleiotropic regulatory protein RsmS compare
NOLOHH_06675 wzxE -4.0 -2.7 lipid III flippase WzxE compare
NOLOHH_07685 mtlR -4.0 -8.8 mannitol operon repressor MtlR conserved
NOLOHH_23735 rlmH -3.9 -2.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
NOLOHH_23730 rsfS -3.9 -5.1 ribosome silencing factor compare
NOLOHH_13415 guaA -3.9 -2.7 glutamine-hydrolyzing GMP synthase compare
NOLOHH_23480 pgm -3.9 -2.7 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_21130 yceD -3.9 -2.7 23S rRNA accumulation protein YceD compare
NOLOHH_03030 cra -3.8 -4.5 catabolite repressor/activator compare
NOLOHH_23250 tolR -3.8 -2.6 colicin uptake protein TolR compare
NOLOHH_16845 zwf -3.7 -1.8 glucose-6-phosphate dehydrogenase compare
NOLOHH_16305 fliN -3.7 -1.9 flagellar motor switch protein FliN compare
NOLOHH_05815 metL -3.7 -9.8 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_24815 trbG -3.7 -1.3 conjugal transfer protein TrbG compare
NOLOHH_21170 flgI -3.7 -2.5 flagellar basal body P-ring protein FlgI compare
NOLOHH_07440 rpoZ -3.7 -5.9 DNA-directed RNA polymerase subunit omega compare
NOLOHH_24675 finO -3.7 -6.9 Fertility inhibition protein compare
NOLOHH_18050 rsxE -3.7 -2.0 electron transport complex subunit RsxE compare
NOLOHH_06530 corA -3.6 -2.5 magnesium/cobalt transporter CorA compare
NOLOHH_16310 fliM -3.6 -2.1 flagellar motor switch protein FliM compare
NOLOHH_14780 apbE -3.6 -2.5 FAD:protein FMN transferase ApbE compare
NOLOHH_16970 proQ -3.6 -4.5 RNA chaperone ProQ compare
NOLOHH_17230 cdgI -3.6 -1.5 putative diguanylate cyclase CdgI compare
NOLOHH_00385 -3.6 -1.8 hypothetical protein compare
NOLOHH_06410 tatB -3.6 -4.1 Sec-independent protein translocase protein TatB compare
NOLOHH_14305 truA -3.6 -4.2 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_08775 -3.5 -5.4 NfuA family Fe-S biogenesis protein compare
NOLOHH_21200 flgC -3.5 -2.1 flagellar basal body rod protein FlgC compare
NOLOHH_23145 galE -3.5 -5.8 UDP-glucose 4-epimerase GalE compare
NOLOHH_04005 Leu_trna -3.4 -1.7 tRNA-Leu(caa) compare
NOLOHH_10640 ygiN -3.4 -2.2 putative quinol monooxygenase YgiN compare
NOLOHH_11495 xerD -3.4 -3.2 site-specific tyrosine recombinase XerD compare
NOLOHH_13365 rodZ -3.3 -5.9 cytoskeleton protein RodZ compare
NOLOHH_11230 tkt -3.3 -2.3 transketolase compare
NOLOHH_21165 flgJ -3.3 -3.2 flagellar assembly peptidoglycan hydrolase FlgJ compare
NOLOHH_10280 mzrA -3.3 -9.7 EnvZ/OmpR regulon moderator MzrA compare
NOLOHH_20255 yciX -3.3 -1.4 YmiA family putative membrane protein compare
NOLOHH_18060 rsxD -3.3 -3.2 electron transport complex subunit RsxD compare
NOLOHH_13070 rseC -3.3 -2.3 SoxR-reducing system protein RseC compare
NOLOHH_13185 glyA -3.3 -4.9 serine hydroxymethyltransferase compare
NOLOHH_01275 tig -3.2 -6.4 trigger factor compare
NOLOHH_06300 dsbA -3.2 -2.2 thiol:disulfide interchange protein DsbA compare
NOLOHH_02670 mrcB -3.1 -16.6 bifunctional glycosyl transferase/transpeptidase compare
NOLOHH_16315 fliL -3.1 -2.3 flagellar basal body-associated protein FliL compare
NOLOHH_21210 flgA -3.0 -2.1 flagellar basal body P-ring formation protein FlgA compare
NOLOHH_09695 arcB -3.0 -4.6 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_05965 pfkA -3.0 -6.0 6-phosphofructokinase compare
NOLOHH_09725 rapZ -3.0 -7.8 RNase adapter RapZ compare
NOLOHH_16285 fliR -3.0 -1.4 flagellar type III secretion system protein FliR compare
NOLOHH_02510 skp -2.9 -1.9 molecular chaperone Skp compare
NOLOHH_03170 surA -2.9 -3.5 peptidylprolyl isomerase SurA compare
NOLOHH_09085 slyD -2.9 -7.7 peptidylprolyl isomerase compare
NOLOHH_14160 Arg_trna -2.9 -4.1 tRNA-Arg(cct) compare
NOLOHH_23105 pgl -2.9 -7.0 6-phosphogluconolactonase compare
NOLOHH_00170 -2.9 -1.0 hypothetical protein compare
NOLOHH_11480 sdhE -2.9 -1.0 FAD assembly factor SdhE compare
NOLOHH_13035 srmB -2.9 -9.7 ATP-dependent RNA helicase SrmB compare
NOLOHH_11425 ubiI -2.8 -1.9 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_13285 iscR -2.8 -2.6 Fe-S cluster assembly transcriptional regulator IscR compare
NOLOHH_05490 hupA -2.8 -1.7 DNA-binding protein HU-alpha compare
NOLOHH_11365 rpiA -2.8 -1.9 ribose-5-phosphate isomerase RpiA compare
NOLOHH_03020 rsmH -2.8 -3.6 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
NOLOHH_18070 rsxB -2.7 -1.7 electron transport complex subunit RsxB compare
NOLOHH_08900 aroK -2.7 -1.9 shikimate kinase AroK compare
NOLOHH_14340 ubiX -2.7 -1.8 flavin prenyltransferase UbiX compare
NOLOHH_14910 yejM -2.6 -2.9 LPS biosynthesis-modulating metalloenzyme YejM compare
NOLOHH_23545 nagA -2.6 -6.9 N-acetylglucosamine-6-phosphate deacetylase compare
NOLOHH_06415 tatA -2.6 -1.9 Sec-independent protein translocase subunit TatA compare
NOLOHH_09850 yhbY -2.6 -3.0 ribosome assembly RNA-binding protein YhbY compare
NOLOHH_08510 ftsE -2.6 -3.8 cell division ATP-binding protein FtsE compare
NOLOHH_06395 rfaH -2.6 -6.5 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_19040 adhP -2.6 -2.3 alcohol dehydrogenase AdhP compare
NOLOHH_13055 rseA -2.5 -2.4 anti-sigma-E factor RseA compare
NOLOHH_04165 treC -2.5 -3.4 alpha,alpha-phosphotrehalase compare
NOLOHH_12630 ygaH -2.5 -5.0 L-valine transporter subunit YgaH compare
NOLOHH_09590 argR -2.5 -3.1 transcriptional regulator ArgR compare
NOLOHH_20735 fadR -2.5 -1.7 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_12655 proW -2.5 -8.2 glycine betaine/L-proline ABC transporter permease ProW conserved
NOLOHH_13450 ppk1 -2.5 -7.0 polyphosphate kinase 1 compare
NOLOHH_11145 gshB -2.5 -7.7 glutathione synthase compare
NOLOHH_06695 rffG -2.5 -13.1 dTDP-glucose 4,6-dehydratase compare
NOLOHH_11490 fldB -2.4 -7.1 flavodoxin FldB compare
NOLOHH_11185 speB -2.4 -6.5 agmatinase compare
NOLOHH_07125 -2.4 -3.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_14300 usg -2.4 -4.7 aspartate-semialdehyde dehydrogenase compare
NOLOHH_02185 ydcD -2.4 -1.2 Uncharacterized protein YdcD compare
NOLOHH_23310 odhB -2.4 -1.6 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_06920 mnmG -2.4 -4.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_20465 rssB -2.4 -2.9 two-component system response regulator RssB compare
NOLOHH_12545 recA -2.3 -3.2 recombinase RecA compare
NOLOHH_01150 tomB -2.3 -5.2 Hha toxicity modulator TomB compare
NOLOHH_06385 fre -2.3 -8.3 NAD(P)H-flavin reductase compare
NOLOHH_13170 qseF -2.2 -7.6 two-component system response regulator QseF/GlrR conserved
NOLOHH_18065 rsxC -2.2 -4.1 electron transport complex subunit RsxC compare
NOLOHH_17655 aroH -2.2 -3.2 3-deoxy-7-phosphoheptulonate synthase AroH compare
NOLOHH_20530 narX -2.2 -4.4 nitrate/nitrite two-component system sensor histidine kinase NarX compare
NOLOHH_10020 diaA -2.2 -9.1 DnaA initiator-associating protein DiaA compare
NOLOHH_00940 -2.1 -1.7 RHS repeat protein compare
NOLOHH_12635 ygaZ -2.1 -6.3 L-valine exporter subunit YgaZ compare
NOLOHH_05950 cdh -2.1 -10.8 CDP-diacylglycerol diphosphatase compare
NOLOHH_09875 secG -2.1 -1.6 preprotein translocase subunit SecG compare
NOLOHH_16180 msrQ -2.1 -2.4 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
NOLOHH_12600 gshA -2.1 -8.9 glutamate--cysteine ligase compare
NOLOHH_23885 ahpC -2.0 -6.9 alkyl hydroperoxide reductase subunit C compare
NOLOHH_12310 rpoS -2.0 -7.1 RNA polymerase sigma factor RpoS compare
NOLOHH_24465 -2.0 -2.2 Longus pilus structural subunit compare
NOLOHH_22695 ybhL -2.0 -2.2 Inhibitor of apoptosis-promoting Bax1 compare
NOLOHH_09760 kdsC -2.0 -3.2 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
NOLOHH_02870 ampD -2.0 -6.6 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
NOLOHH_24290 ssb -2.0 -2.6 single-stranded DNA-binding protein compare
NOLOHH_02455 rof -2.0 -2.1 Rho-binding antiterminator compare
NOLOHH_16750 mepM -2.0 -4.9 murein DD-endopeptidase MepM conserved
NOLOHH_02845 aceE -2.0 -1.3 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_15075 lysP -2.0 -11.3 lysine-specific permease compare
NOLOHH_23345 gltA -1.9 -4.9 citrate synthase compare
NOLOHH_05885 hslU -1.9 -2.3 HslU--HslV peptidase ATPase subunit compare
NOLOHH_16230 dcm -1.9 -3.4 DNA-cytosine methyltransferase conserved
NOLOHH_21020 ndh -1.9 -5.1 NADH-quinone dehydrogenase compare
NOLOHH_21640 gfcB -1.9 -4.1 Uncharacterized lipoprotein GfcB compare
NOLOHH_18305 ynfA -1.9 -1.2 YnfA family protein compare
NOLOHH_22605 ybiJ -1.9 -2.4 DUF1471 domain-containing protein compare
NOLOHH_19485 paaB -1.9 -1.7 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_21045 lpoB -1.8 -2.5 penicillin-binding protein activator LpoB compare
NOLOHH_13165 qseG -1.8 -5.0 two-component system QseEF-associated lipoprotein QseG conserved
NOLOHH_11515 lysS -1.8 -1.7 lysine--tRNA ligase compare
NOLOHH_02340 yafD -1.8 -7.7 endonuclease/exonuclease/phosphatase family protein conserved
NOLOHH_03505 ettA -1.8 -6.1 energy-dependent translational throttle protein EttA conserved
NOLOHH_02805 yacC -1.8 -5.7 YacC family pilotin-like protein conserved
NOLOHH_10690 ftsP -1.8 -6.9 cell division protein FtsP compare
NOLOHH_20440 ychT -1.8 -1.0 Protein YchT compare
NOLOHH_05980 cpxR -1.7 -5.1 envelope stress response regulator transcription factor CpxR compare
NOLOHH_00135 -1.7 -1.4 hypothetical protein compare


Specific Phenotypes

For 57 genes in this experiment

For phage Phage in Escherichia coli ECOR27

For phage Phage across organisms