Experiment set5S268 for Pseudomonas sp. RS175

Compare to:

Glycocyamine 20 mM carbon source

200 most important genes:

  gene name fitness t score description  
PFR28_03653 -4.6 -4.2 Molybdopterin-synthase adenylyltransferase compare
PFR28_00780 -3.9 -1.7 hypothetical protein compare
PFR28_00098 -3.8 -5.2 Nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
PFR28_03388 -3.5 -6.8 Quinolinate synthase A compare
PFR28_04252 -3.5 -8.6 Thiazole synthase compare
PFR28_03012 -3.4 -4.1 Phosphate acyltransferase compare
PFR28_05091 -3.4 -15.5 Phosphomethylpyrimidine synthase compare
PFR28_04958 -3.4 -2.3 hypothetical protein compare
PFR28_03844 -3.3 -4.5 Thiamine-phosphate synthase compare
PFR28_01809 -3.2 -1.4 hypothetical protein compare
PFR28_02704 -3.1 -1.4 hypothetical protein compare
PFR28_03202 -3.1 -2.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFR28_04246 -2.9 -3.4 Bifunctional methionine biosynthesis protein MetXA/MetW compare
PFR28_04245 -2.8 -3.4 Homoserine O-succinyltransferase compare
PFR28_02283 -2.8 -2.7 hypothetical protein compare
PFR28_03843 -2.7 -6.4 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFR28_04834 -2.6 -4.0 L-threonine dehydratase biosynthetic IlvA compare
PFR28_03714 -2.6 -8.7 RNA polymerase-binding transcription factor DksA compare
PFR28_02810 -2.5 -3.0 O-succinylhomoserine sulfhydrylase compare
PFR28_04425 -2.5 -7.5 2-iminobutanoate/2-iminopropanoate deaminase compare
PFR28_05125 -2.5 -1.7 ATP phosphoribosyltransferase regulatory subunit compare
PFR28_04071 -2.3 -1.5 Multifunctional CCA protein compare
PFR28_00188 -2.3 -2.3 Histidinol-phosphate aminotransferase compare
PFR28_00689 -2.3 -13.1 L-aspartate oxidase compare
PFR28_03596 -2.3 -2.2 Transcriptional regulator MraZ compare
PFR28_04782 -2.3 -11.9 hypothetical protein compare
PFR28_04120 -2.3 -1.9 hypothetical protein compare
PFR28_02386 -2.3 -3.0 Protein hcp1 compare
PFR28_00193 -2.2 -5.4 Sulfate adenylyltransferase subunit 2 compare
PFR28_00296 -2.2 -4.1 Cytoskeleton protein RodZ compare
PFR28_00960 -2.2 -4.4 hypothetical protein compare
PFR28_02127 -2.1 -1.8 hypothetical protein compare
PFR28_02151 -2.0 -4.4 hypothetical protein compare
PFR28_00089 -2.0 -1.1 Transcription termination/antitermination protein NusA compare
PFR28_03363 -2.0 -2.7 Ornithine carbamoyltransferase 1, anabolic compare
PFR28_01319 -2.0 -7.0 1,4-alpha-glucan branching enzyme GlgB compare
PFR28_03412 -2.0 -2.3 Holliday junction ATP-dependent DNA helicase RuvB compare
PFR28_05015 -1.9 -1.9 Glutamate synthase [NADPH] large chain compare
PFR28_05016 -1.9 -1.3 Glutamate synthase [NADPH] small chain compare
PFR28_01142 -1.9 -2.9 Transaldolase compare
PFR28_04985 -1.9 -1.3 Phosphoribosyl-ATP pyrophosphatase compare
PFR28_04832 -1.9 -2.6 putative phosphatase compare
PFR28_01575 -1.9 -3.3 Ycf48-like protein compare
PFR28_04930 -1.9 -1.3 Imidazole glycerol phosphate synthase subunit HisH compare
PFR28_04986 -1.8 -1.3 Phosphoribosyl-AMP cyclohydrolase compare
PFR28_01672 -1.8 -2.1 hypothetical protein compare
PFR28_04380 -1.8 -1.2 Transcriptional regulator SutA compare
PFR28_04064 -1.7 -1.7 Ribosomal RNA small subunit methyltransferase A compare
PFR28_03778 -1.7 -1.3 hypothetical protein compare
PFR28_00356 -1.7 -5.1 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
PFR28_03697 -1.7 -1.2 Ketol-acid reductoisomerase (NADP(+)) compare
PFR28_04929 -1.7 -1.2 Histidine biosynthesis bifunctional protein HisB compare
PFR28_04278 -1.7 -1.2 Dihydroxy-acid dehydratase compare
PFR28_03571 -1.7 -2.3 Protein AaeX compare
PFR28_03533 -1.7 -1.7 DNA-binding protein HU 1 compare
PFR28_00159 -1.7 -1.6 hypothetical protein compare
PFR28_05042 -1.7 -2.0 hypothetical protein compare
PFR28_04103 -1.6 -2.9 Biotin synthase compare
PFR28_04521 -1.6 -2.9 HTH-type transcriptional regulator HexR compare
PFR28_04517 -1.6 -6.8 Oxaloacetate decarboxylase alpha chain compare
PFR28_00837 -1.6 -5.1 hypothetical protein compare
PFR28_02838 -1.6 -6.4 Aromatic-amino-acid aminotransferase compare
PFR28_00186 -1.6 -1.5 ATP phosphoribosyltransferase compare
PFR28_04830 -1.6 -7.7 Phosphoenolpyruvate-dependent phosphotransferase system compare
PFR28_03429 -1.5 -4.8 Thiamine-phosphate synthase compare
PFR28_00194 -1.5 -4.4 Bifunctional enzyme CysN/CysC compare
PFR28_01366 -1.5 -1.8 Sulfite reductase [ferredoxin] compare
PFR28_03666 -1.5 -1.4 hypothetical protein compare
PFR28_00180 -1.5 -3.7 Intermembrane phospholipid transport system permease protein MlaE compare
PFR28_02111 -1.5 -2.8 hypothetical protein compare
PFR28_01435 -1.5 -1.5 Response regulator UvrY compare
PFR28_00405 -1.5 -1.4 hypothetical protein compare
PFR28_01078 -1.5 -2.3 Adenine phosphoribosyltransferase compare
PFR28_00966 -1.5 -2.4 HTH-type transcriptional regulator CysB compare
PFR28_01670 -1.5 -1.7 hypothetical protein compare
PFR28_03573 -1.4 -5.4 Toluene efflux pump outer membrane protein TtgI compare
PFR28_00690 -1.4 -3.4 RNA polymerase sigma-H factor compare
PFR28_03178 -1.4 -1.8 tRNA-Asp compare
PFR28_02719 -1.4 -1.6 Integration host factor subunit alpha compare
PFR28_05000 -1.4 -1.8 Cell division protein FtsN compare
PFR28_04102 -1.4 -4.5 8-amino-7-oxononanoate synthase compare
PFR28_04418 -1.4 -1.3 Exodeoxyribonuclease compare
PFR28_04933 -1.4 -0.9 Imidazole glycerol phosphate synthase subunit HisF compare
PFR28_04932 -1.4 -0.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PFR28_03369 -1.4 -3.2 Glycerol-3-phosphate regulon repressor compare
PFR28_03326 -1.4 -4.5 hypothetical protein compare
PFR28_00181 -1.4 -5.5 Intermembrane phospholipid transport system binding protein MlaD compare
PFR28_02048 -1.4 -2.2 hypothetical protein compare
PFR28_03414 -1.3 -1.3 Crossover junction endodeoxyribonuclease RuvC compare
PFR28_02608 -1.3 -1.3 DNA translocase FtsK compare
PFR28_03724 -1.3 -3.2 Glucose-6-phosphate isomerase compare
PFR28_01386 -1.3 -2.1 Glutamine transport ATP-binding protein GlnQ compare
PFR28_05160 -1.3 -1.5 hypothetical protein compare
PFR28_05139 -1.3 -0.9 hypothetical protein compare
PFR28_01139 -1.3 -7.6 Intermembrane phospholipid transport system lipoprotein MlaA compare
PFR28_00182 -1.3 -5.0 Intermembrane phospholipid transport system binding protein MlaC compare
PFR28_02021 -1.3 -1.3 FMN reductase (NADH) RutF compare
PFR28_00169 -1.3 -2.4 Phosphocarrier protein NPr compare
PFR28_04208 -1.3 -3.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PFR28_01381 -1.3 -2.0 hypothetical protein compare
PFR28_01157 -1.3 -1.4 hypothetical protein compare
PFR28_01031 -1.3 -3.4 Sensor protein QseC compare
PFR28_03837 -1.3 -4.3 Leucine-responsive regulatory protein compare
PFR28_04620 -1.3 -2.0 Zinc uptake regulation protein compare
PFR28_00573 -1.2 -5.5 Glucose-6-phosphate 1-dehydrogenase compare
PFR28_03536 -1.2 -2.0 hypothetical protein compare
PFR28_02603 -1.2 -0.9 Siroheme synthase compare
PFR28_04100 -1.2 -3.4 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PFR28_01583 -1.2 -1.1 hypothetical protein compare
PFR28_03282 -1.2 -2.3 Arginine N-succinyltransferase subunit alpha compare
PFR28_02414 -1.2 -2.1 RNA polymerase-binding transcription factor DksA compare
PFR28_01212 -1.2 -1.2 hypothetical protein compare
PFR28_04262 -1.2 -2.4 Ribosomal RNA small subunit methyltransferase D compare
PFR28_02449 -1.2 -3.6 putative branched-chain-amino-acid aminotransferase compare
PFR28_00918 -1.2 -4.4 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
PFR28_01365 -1.2 -1.1 hypothetical protein compare
PFR28_00184 -1.2 -2.1 hypothetical protein compare
PFR28_00305 -1.2 -3.1 2-isopropylmalate synthase compare
PFR28_01851 -1.2 -2.9 hypothetical protein compare
PFR28_01501 -1.1 -3.0 Inner membrane protein YqjF compare
PFR28_02527 -1.1 -2.5 hypothetical protein compare
PFR28_00068 -1.1 -0.8 hypothetical protein compare
PFR28_01135 -1.1 -2.0 hypothetical protein compare
PFR28_02357 -1.1 -3.1 Bicyclomycin resistance protein compare
PFR28_00695 -1.1 -0.7 Sulfur carrier protein TusA compare
PFR28_02824 -1.1 -0.8 3-isopropylmalate dehydratase large subunit compare
PFR28_01587 -1.1 -1.4 hypothetical protein compare
PFR28_03612 -1.1 -1.6 Cell division protein ZapE compare
PFR28_04232 -1.1 -2.7 Glutathione synthetase compare
PFR28_03865 -1.1 -3.0 Endolytic peptidoglycan transglycosylase RlpA compare
PFR28_00980 -1.1 -0.7 ATP-dependent RNA helicase DeaD compare
PFR28_05147 -1.1 -2.6 Azurin compare
PFR28_00179 -1.1 -4.1 Intermembrane phospholipid transport system ATP-binding protein MlaF compare
PFR28_05216 -1.1 -2.8 tRNA-dihydrouridine synthase B compare
PFR28_02742 -1.1 -3.0 hypothetical protein compare
PFR28_01372 -1.1 -1.4 Precorrin-4 C(11)-methyltransferase compare
PFR28_02759 -1.0 -2.0 hypothetical protein compare
PFR28_03507 -1.0 -2.2 Protein YrdA compare
PFR28_04518 -1.0 -4.5 2-oxoglutarate carboxylase small subunit compare
PFR28_02242 -1.0 -2.6 putative ABC transporter permease protein NosY compare
PFR28_00694 -1.0 -2.5 Beta-barrel assembly-enhancing protease compare
PFR28_03957 -1.0 -4.5 hypothetical protein compare
PFR28_03418 -1.0 -2.6 hypothetical protein compare
PFR28_01998 -1.0 -3.7 Blue light- and temperature-regulated antirepressor BluF compare
PFR28_04842 -1.0 -2.1 D-3-phosphoglycerate dehydrogenase compare
PFR28_01330 -1.0 -0.7 Glucose starvation-inducible protein B compare
PFR28_01593 -1.0 -1.5 hypothetical protein compare
PFR28_00331 -1.0 -2.5 Tyrosine recombinase XerD compare
PFR28_03572 -1.0 -4.0 p-hydroxybenzoic acid efflux pump subunit AaeB compare
PFR28_03504 -1.0 -3.0 DNA-binding protein compare
PFR28_02821 -1.0 -1.3 3-isopropylmalate dehydrogenase compare
PFR28_03455 -1.0 -2.2 Pyruvate kinase II compare
PFR28_02216 -1.0 -2.6 Molybdenum cofactor biosynthesis protein B compare
PFR28_03634 -1.0 -2.3 hypothetical protein compare
PFR28_03192 -1.0 -1.1 hypothetical protein compare
PFR28_00451 -1.0 -1.4 hypothetical protein compare
PFR28_03650 -1.0 -0.9 hypothetical protein compare
PFR28_02823 -1.0 -0.6 3-isopropylmalate dehydratase small subunit 1 compare
PFR28_02949 -1.0 -2.2 hypothetical protein compare
PFR28_01358 -1.0 -1.1 hypothetical protein compare
PFR28_04228 -1.0 -3.1 hypothetical protein compare
PFR28_02740 -1.0 -1.2 hypothetical protein compare
PFR28_03308 -0.9 -1.6 hypothetical protein compare
PFR28_03846 -0.9 -2.8 hypothetical protein compare
PFR28_02846 -0.9 -2.7 Adaptive-response sensory-kinase SasA compare
PFR28_03919 -0.9 -1.0 hypothetical protein compare
PFR28_03597 -0.9 -3.2 Ribosomal RNA small subunit methyltransferase I compare
PFR28_01729 -0.9 -4.3 Efflux pump periplasmic linker BepF compare
PFR28_01428 -0.9 -1.8 Chemotaxis protein CheA compare
PFR28_05105 -0.9 -1.7 Phosphoserine phosphatase SerB2 compare
PFR28_03806 -0.9 -1.2 Protein/nucleic acid deglycase 3 compare
PFR28_01631 -0.9 -2.1 Nitrate/nitrite transporter NarK compare
PFR28_00930 -0.9 -3.5 GDP-perosamine synthase compare
PFR28_03719 -0.9 -2.4 Poly(A) polymerase I compare
PFR28_00448 -0.9 -1.4 hypothetical protein compare
PFR28_04519 -0.9 -3.1 HTH-type transcriptional activator CmpR compare
PFR28_01375 -0.9 -1.1 hypothetical protein compare
PFR28_04633 -0.9 -1.8 Alginate biosynthesis sensor protein KinB compare
PFR28_03570 -0.9 -2.0 p-hydroxybenzoic acid efflux pump subunit AaeA compare
PFR28_03322 -0.9 -1.6 hypothetical protein compare
PFR28_02145 -0.9 -7.5 Glycogen synthase compare
PFR28_01616 -0.9 -0.8 HTH-type transcriptional regulator YofA compare
PFR28_00299 -0.9 -0.6 hypothetical protein compare
PFR28_00925 -0.9 -1.3 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
PFR28_00987 -0.9 -2.7 Organic hydroperoxide resistance transcriptional regulator compare
PFR28_01113 -0.9 -1.3 DNA topoisomerase 1 compare
PFR28_00913 -0.8 -2.2 Integration host factor subunit beta compare
PFR28_02484 -0.8 -0.6 UTP--glucose-1-phosphate uridylyltransferase compare
PFR28_05182 -0.8 -1.4 Urease accessory protein UreD compare
PFR28_02289 -0.8 -1.4 HTH-type transcriptional repressor NicS compare
PFR28_02296 -0.8 -2.2 Tryptophan-rich sensory protein compare
PFR28_02861 -0.8 -2.3 hypothetical protein compare
PFR28_05249 -0.8 -2.4 Zinc-type alcohol dehydrogenase-like protein compare
PFR28_02083 -0.8 -4.9 Pesticin receptor compare
PFR28_03775 -0.8 -2.1 hypothetical protein compare
PFR28_04824 -0.8 -3.5 Cadmium-transporting ATPase compare
PFR28_01980 -0.8 -2.9 Disulfide-bond oxidoreductase YghU compare
PFR28_03204 -0.8 -2.6 Cobyric acid synthase compare
PFR28_03387 -0.8 -0.7 hypothetical protein compare
PFR28_01774 -0.8 -1.8 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Glycocyamine in Pseudomonas sp. RS175

For carbon source Glycocyamine across organisms