Experiment set5S248 for Pseudomonas sp. RS175

Compare to:

L-Phenylalanine 5 mM carbon source

200 most important genes:

  gene name fitness t score description  
PFR28_00837 -5.0 -11.6 hypothetical protein compare
PFR28_04071 -4.7 -2.1 Multifunctional CCA protein compare
PFR28_00222 -4.7 -20.4 hypothetical protein compare
PFR28_03388 -4.6 -9.8 Quinolinate synthase A compare
PFR28_00098 -4.6 -7.6 Nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
PFR28_04252 -4.5 -11.4 Thiazole synthase compare
PFR28_00223 -4.4 -8.4 Maleylpyruvate isomerase conserved
PFR28_02475 -4.1 -15.6 4-hydroxyphenylpyruvate dioxygenase conserved
PFR28_04246 -4.1 -2.8 Bifunctional methionine biosynthesis protein MetXA/MetW compare
PFR28_03653 -3.9 -4.9 Molybdopterin-synthase adenylyltransferase compare
PFR28_03843 -3.8 -9.3 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFR28_00918 -3.7 -3.6 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
PFR28_04245 -3.6 -5.0 Homoserine O-succinyltransferase compare
PFR28_00221 -3.6 -16.8 Homogentisate 1,2-dioxygenase conserved
PFR28_00188 -3.6 -4.9 Histidinol-phosphate aminotransferase compare
PFR28_04834 -3.5 -5.8 L-threonine dehydratase biosynthetic IlvA compare
PFR28_03844 -3.4 -7.5 Thiamine-phosphate synthase compare
PFR28_00193 -3.4 -7.5 Sulfate adenylyltransferase subunit 2 compare
PFR28_00800 -3.4 -11.9 Aspartate aminotransferase conserved
PFR28_02810 -3.3 -6.0 O-succinylhomoserine sulfhydrylase compare
PFR28_00960 -3.3 -3.2 hypothetical protein compare
PFR28_05091 -3.2 -18.5 Phosphomethylpyrimidine synthase compare
PFR28_03724 -3.0 -5.7 Glucose-6-phosphate isomerase compare
PFR28_00194 -3.0 -6.9 Bifunctional enzyme CysN/CysC compare
PFR28_00181 -2.9 -11.4 Intermembrane phospholipid transport system binding protein MlaD compare
PFR28_00356 -2.9 -8.2 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
PFR28_03596 -2.9 -3.3 Transcriptional regulator MraZ compare
PFR28_01319 -2.8 -10.8 1,4-alpha-glucan branching enzyme GlgB compare
PFR28_04436 -2.8 -4.6 hypothetical protein compare
PFR28_04335 -2.8 -7.6 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PFR28_03363 -2.8 -4.2 Ornithine carbamoyltransferase 1, anabolic compare
PFR28_01142 -2.7 -5.9 Transaldolase compare
PFR28_01182 -2.7 -2.4 hypothetical protein compare
PFR28_03311 -2.7 -18.0 Aromatic amino acid transport protein AroP conserved
PFR28_04887 -2.6 -3.5 '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 compare
PFR28_03714 -2.6 -12.4 RNA polymerase-binding transcription factor DksA compare
PFR28_00803 -2.6 -15.1 Transcriptional regulatory protein TyrR conserved
PFR28_04985 -2.5 -1.7 Phosphoribosyl-ATP pyrophosphatase compare
PFR28_05016 -2.5 -3.0 Glutamate synthase [NADPH] small chain compare
PFR28_05015 -2.5 -6.1 Glutamate synthase [NADPH] large chain compare
PFR28_03784 -2.5 -8.5 Energy-dependent translational throttle protein EttA compare
PFR28_03012 -2.5 -7.6 Phosphate acyltransferase compare
PFR28_04832 -2.5 -5.0 putative phosphatase compare
PFR28_03697 -2.5 -1.7 Ketol-acid reductoisomerase (NADP(+)) compare
PFR28_04930 -2.4 -2.4 Imidazole glycerol phosphate synthase subunit HisH compare
PFR28_00622 -2.4 -4.0 Beta-ketoadipyl-CoA thiolase compare
PFR28_00928 -2.4 -3.2 putative sugar transferase EpsL compare
PFR28_04380 -2.4 -1.6 Transcriptional regulator SutA compare
PFR28_04278 -2.4 -1.6 Dihydroxy-acid dehydratase compare
PFR28_00826 -2.4 -9.6 Flagellar secretion chaperone FliS compare
PFR28_00159 -2.4 -3.6 hypothetical protein compare
PFR28_04929 -2.4 -1.6 Histidine biosynthesis bifunctional protein HisB compare
PFR28_00186 -2.3 -2.7 ATP phosphoribosyltransferase compare
PFR28_00845 -2.3 -8.7 Flagellar biosynthetic protein FliP compare
PFR28_00855 -2.3 -10.0 hypothetical protein compare
PFR28_04325 -2.3 -5.8 5-formyltetrahydrofolate cyclo-ligase compare
PFR28_00839 -2.3 -4.6 hypothetical protein compare
PFR28_04103 -2.3 -4.9 Biotin synthase compare
PFR28_00810 -2.3 -15.6 hypothetical protein compare
PFR28_05125 -2.2 -3.9 ATP phosphoribosyltransferase regulatory subunit compare
PFR28_00825 -2.2 -14.3 B-type flagellar hook-associated protein 2 compare
PFR28_01366 -2.2 -3.4 Sulfite reductase [ferredoxin] compare
PFR28_04418 -2.2 -1.5 Exodeoxyribonuclease compare
PFR28_00844 -2.2 -2.5 hypothetical protein compare
PFR28_03257 -2.2 -10.2 hypothetical protein compare
PFR28_03412 -2.2 -4.7 Holliday junction ATP-dependent DNA helicase RuvB compare
PFR28_03259 -2.2 -4.7 hypothetical protein compare
PFR28_00180 -2.2 -7.9 Intermembrane phospholipid transport system permease protein MlaE compare
PFR28_04110 -2.2 -10.3 Malate synthase G compare
PFR28_00853 -2.2 -8.9 Chemotaxis protein CheY compare
PFR28_00834 -2.2 -16.0 hypothetical protein compare
PFR28_00848 -2.1 -12.1 Flagellar biosynthetic protein FlhB compare
PFR28_00807 -2.1 -8.6 Flagellar P-ring protein compare
PFR28_01365 -2.1 -1.5 hypothetical protein compare
PFR28_00842 -2.1 -13.7 Flagellar motor switch protein FliM compare
PFR28_03202 -2.1 -2.4 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFR28_03846 -2.1 -7.0 hypothetical protein compare
PFR28_01139 -2.1 -13.1 Intermembrane phospholipid transport system lipoprotein MlaA compare
PFR28_04986 -2.1 -2.4 Phosphoribosyl-AMP cyclohydrolase compare
PFR28_00832 -2.1 -14.3 Flagellar M-ring protein compare
PFR28_03251 -2.1 -16.7 Flagellar hook protein FlgE compare
PFR28_00182 -2.1 -9.7 Intermembrane phospholipid transport system binding protein MlaC compare
PFR28_00966 -2.1 -5.8 HTH-type transcriptional regulator CysB compare
PFR28_05000 -2.1 -3.3 Cell division protein FtsN compare
PFR28_03254 -2.1 -10.4 Flagellar basal body rod protein FlgB compare
PFR28_00835 -2.0 -17.0 Flagellum-specific ATP synthase compare
PFR28_00809 -2.0 -14.4 hypothetical protein compare
PFR28_00849 -2.0 -15.8 Flagellar biosynthesis protein FlhA compare
PFR28_03255 -2.0 -12.6 Chemotaxis protein methyltransferase Cher2 compare
PFR28_02613 -2.0 -8.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
PFR28_02603 -2.0 -1.4 Siroheme synthase compare
PFR28_00179 -2.0 -7.9 Intermembrane phospholipid transport system ATP-binding protein MlaF compare
PFR28_00808 -2.0 -12.5 hypothetical protein compare
PFR28_00831 -2.0 -12.7 Flagellar hook-basal body complex protein FliE compare
PFR28_00805 -2.0 -10.8 Flagellar basal-body rod protein FlgG compare
PFR28_00840 -2.0 -12.2 hypothetical protein compare
PFR28_00804 -2.0 -11.1 Flagellar basal-body rod protein FlgF compare
PFR28_00861 -2.0 -12.1 Chemotaxis protein CheW compare
PFR28_00930 -2.0 -7.9 GDP-perosamine synthase compare
PFR28_00847 -2.0 -7.9 Flagellar biosynthetic protein FliR compare
PFR28_03253 -2.0 -11.8 Flagellar basal-body rod protein FlgC compare
PFR28_00850 -2.0 -13.4 Signal recognition particle 54 kDa protein compare
PFR28_03865 -1.9 -5.9 Endolytic peptidoglycan transglycosylase RlpA compare
PFR28_00806 -1.9 -13.0 Flagellar L-ring protein compare
PFR28_00305 -1.9 -5.7 2-isopropylmalate synthase compare
PFR28_04933 -1.9 -1.3 Imidazole glycerol phosphate synthase subunit HisF compare
PFR28_00852 -1.9 -14.5 RNA polymerase sigma factor FliA compare
PFR28_00846 -1.9 -13.7 Flagellar biosynthetic protein FliQ compare
PFR28_00856 -1.9 -7.8 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 compare
PFR28_00823 -1.9 -9.6 Flagellin compare
PFR28_00296 -1.9 -2.0 Cytoskeleton protein RodZ compare
PFR28_01324 -1.8 -7.0 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B conserved
PFR28_04232 -1.8 -4.5 Glutathione synthetase compare
PFR28_00833 -1.8 -7.4 Flagellar motor switch protein FliG compare
PFR28_02608 -1.8 -2.3 DNA translocase FtsK compare
PFR28_02824 -1.8 -1.2 3-isopropylmalate dehydratase large subunit compare
PFR28_00836 -1.8 -9.2 Flagellar FliJ protein compare
PFR28_03698 -1.7 -2.1 Acetolactate synthase isozyme 3 small subunit compare
PFR28_04874 -1.7 -9.6 Phosphoenolpyruvate carboxykinase (ATP) compare
PFR28_05071 -1.7 -2.9 D-inositol-3-phosphate glycosyltransferase compare
PFR28_02719 -1.7 -2.6 Integration host factor subunit alpha compare
PFR28_05204 -1.7 -3.3 Sulfite reductase [ferredoxin] compare
PFR28_05139 -1.7 -1.5 hypothetical protein compare
PFR28_02771 -1.7 -2.3 Putative tyrosine-protein kinase YveL compare
PFR28_05105 -1.7 -2.0 Phosphoserine phosphatase SerB2 compare
PFR28_04489 -1.7 -7.4 Phosphate-binding protein PstS compare
PFR28_03413 -1.7 -3.0 Holliday junction ATP-dependent DNA helicase RuvA compare
PFR28_00695 -1.7 -1.1 Sulfur carrier protein TusA compare
PFR28_02145 -1.7 -14.5 Glycogen synthase compare
PFR28_02449 -1.7 -6.4 putative branched-chain-amino-acid aminotransferase compare
PFR28_05199 -1.6 -4.9 Precorrin-6A reductase compare
PFR28_02823 -1.6 -1.0 3-isopropylmalate dehydratase small subunit 1 compare
PFR28_03304 -1.6 -1.5 hypothetical protein compare
PFR28_00854 -1.6 -5.5 Protein phosphatase CheZ compare
PFR28_00689 -1.6 -12.2 L-aspartate oxidase compare
PFR28_02821 -1.6 -3.3 3-isopropylmalate dehydrogenase compare
PFR28_04565 -1.5 -10.8 Protein RarD compare
PFR28_03957 -1.5 -8.5 hypothetical protein compare
PFR28_00089 -1.5 -1.5 Transcription termination/antitermination protein NusA compare
PFR28_04624 -1.5 -8.9 DNA polymerase I compare
PFR28_03209 -1.5 -3.6 Corrinoid adenosyltransferase compare
PFR28_04059 -1.5 -10.2 N-acetylmuramate alpha-1-phosphate uridylyltransferase compare
PFR28_01930 -1.5 -1.4 HTH-type transcriptional regulator McbR compare
PFR28_03223 -1.5 -6.4 GTP pyrophosphokinase compare
PFR28_05079 -1.5 -9.6 hypothetical protein compare
PFR28_02484 -1.5 -1.7 UTP--glucose-1-phosphate uridylyltransferase compare
PFR28_05110 -1.4 -7.8 Motility protein A compare
PFR28_00331 -1.4 -4.6 Tyrosine recombinase XerD compare
PFR28_00633 -1.4 -8.8 HTH-type transcriptional regulator TtgR compare
PFR28_01250 -1.4 -6.7 hypothetical protein compare
PFR28_02846 -1.4 -5.2 Adaptive-response sensory-kinase SasA compare
PFR28_00427 -1.4 -9.8 RNA polymerase sigma factor RpoS compare
PFR28_03204 -1.4 -5.5 Cobyric acid synthase compare
PFR28_03956 -1.4 -8.0 putative ABC transporter ATP-binding protein compare
PFR28_01119 -1.4 -4.7 Beta-hexosaminidase compare
PFR28_03266 -1.4 -2.5 hypothetical protein compare
PFR28_05207 -1.3 -5.5 Siroheme synthase compare
PFR28_03427 -1.3 -3.3 Sensor histidine kinase RcsC compare
PFR28_03578 -1.3 -2.7 Transcriptional activator protein CzcR compare
PFR28_01325 -1.3 -3.7 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A compare
PFR28_03252 -1.3 -6.3 Basal-body rod modification protein FlgD compare
PFR28_04102 -1.3 -6.2 8-amino-7-oxononanoate synthase compare
PFR28_02616 -1.3 -10.0 Isocitrate dehydrogenase [NADP] compare
PFR28_00932 -1.3 -11.6 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase compare
PFR28_03573 -1.3 -7.0 Toluene efflux pump outer membrane protein TtgI compare
PFR28_00472 -1.3 -2.4 Protein RecA compare
PFR28_00828 -1.3 -11.6 Anaerobic nitric oxide reductase transcription regulator NorR compare
PFR28_00841 -1.3 -5.9 hypothetical protein compare
PFR28_04487 -1.3 -6.9 hypothetical protein compare
PFR28_05216 -1.3 -5.6 tRNA-dihydrouridine synthase B compare
PFR28_04488 -1.3 -10.4 hypothetical protein compare
PFR28_02625 -1.3 -7.8 Isocitrate lyase compare
PFR28_01181 -1.3 -5.5 hypothetical protein compare
PFR28_01038 -1.3 -9.8 Phosphoenolpyruvate synthase compare
PFR28_05212 -1.3 -5.3 Sensor histidine kinase RcsC compare
PFR28_00106 -1.3 -3.9 Tagatose-6-phosphate kinase compare
PFR28_00917 -1.3 -8.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
PFR28_01378 -1.2 -2.4 Magnesium-chelatase 38 kDa subunit compare
PFR28_00478 -1.2 -2.6 Transcriptional regulatory protein DegU compare
PFR28_01095 -1.2 -2.3 Cbb3-type cytochrome c oxidase subunit CcoN1 compare
PFR28_00900 -1.2 -6.0 N-acetylmuramic acid 6-phosphate phosphatase compare
PFR28_04902 -1.2 -3.2 Inner membrane protein YgaZ compare
PFR28_03570 -1.2 -3.6 p-hydroxybenzoic acid efflux pump subunit AaeA compare
PFR28_04633 -1.2 -3.1 Alginate biosynthesis sensor protein KinB compare
PFR28_00927 -1.2 -7.9 D-inositol-3-phosphate glycosyltransferase compare
PFR28_00827 -1.2 -5.7 hypothetical protein compare
PFR28_04782 -1.2 -8.7 hypothetical protein compare
PFR28_04842 -1.2 -3.5 D-3-phosphoglycerate dehydrogenase compare
PFR28_01876 -1.2 -1.4 hypothetical protein compare
PFR28_01184 -1.2 -4.8 hypothetical protein compare
PFR28_00862 -1.2 -6.1 hypothetical protein compare
PFR28_04060 -1.2 -9.1 N-acetylmuramate/N-acetylglucosamine kinase compare
PFR28_00728 -1.2 -5.3 5-oxoprolinase subunit A 3 compare
PFR28_00916 -1.2 -8.4 UDP-N-acetylglucosamine 2-epimerase compare
PFR28_00802 -1.1 -4.1 Phenylalanine-4-hydroxylase compare
PFR28_04486 -1.1 -6.9 Phosphate import ATP-binding protein PstB compare
PFR28_01077 -1.1 -3.6 Recombination protein RecR compare
PFR28_03572 -1.1 -5.6 p-hydroxybenzoic acid efflux pump subunit AaeB compare
PFR28_01583 -1.1 -1.5 hypothetical protein compare
PFR28_03218 -1.1 -2.0 Phosphoribosylglycinamide formyltransferase compare


Specific Phenotypes

For 18 genes in this experiment

For carbon source L-Phenylalanine in Pseudomonas sp. RS175

For carbon source L-Phenylalanine across organisms