Experiment set5S178 for Erwinia amylovora T8

Compare to:

Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

200 most important genes:

  gene name fitness t score description  
OLJFJH_10335 -5.9 -4.1 nitrogen regulatory protein P-II compare
OLJFJH_17325 -5.2 -7.2 cytochrome d ubiquinol oxidase subunit II compare
OLJFJH_06785 -5.1 -18.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_15990 -5.1 -6.0 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_06780 -4.7 -17.5 phosphoribosylamine--glycine ligase compare
OLJFJH_17320 -4.7 -16.6 cytochrome ubiquinol oxidase subunit I compare
OLJFJH_09590 -4.7 -2.5 carbon storage regulator CsrA compare
OLJFJH_10645 -4.7 -5.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_06145 -4.7 -25.6 Si-specific NAD(P)(+) transhydrogenase compare
OLJFJH_16200 -4.6 -8.3 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
OLJFJH_16195 -4.6 -8.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
OLJFJH_10590 -4.5 -10.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_02365 -4.5 -5.3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
OLJFJH_13570 -4.5 -6.1 orotidine-5'-phosphate decarboxylase compare
OLJFJH_03640 -4.4 -15.4 lysine-sensitive aspartokinase 3 compare
OLJFJH_15670 -4.3 -5.2 dihydroorotase compare
OLJFJH_07825 -4.3 -5.9 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_11230 -4.3 -2.9 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_11165 -4.2 -7.2 Sulfite exporter TauE/SafE compare
OLJFJH_15725 -4.1 -4.9 glucan biosynthesis protein G compare
OLJFJH_05770 -4.1 -5.7 orotate phosphoribosyltransferase compare
OLJFJH_13440 -4.0 -2.6 TonB system transport protein TonB compare
OLJFJH_10305 -4.0 -18.0 phosphoribosylformylglycinamidine synthase compare
OLJFJH_10565 -4.0 -14.1 polyphosphate kinase 1 compare
OLJFJH_08650 -4.0 -14.9 erythrose-4-phosphate dehydrogenase compare
OLJFJH_11280 -4.0 -13.8 amidophosphoribosyltransferase compare
OLJFJH_00695 -3.8 -5.3 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_00690 -3.8 -6.8 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_07830 -3.8 -5.1 TonB system transport protein ExbD compare
OLJFJH_11450 -3.8 -3.6 NADH-quinone oxidoreductase subunit J compare
OLJFJH_10220 -3.7 -1.0 anti-sigma-E factor RseA compare
OLJFJH_10170 -3.7 -2.9 outer membrane protein assembly factor BamE compare
OLJFJH_17630 -3.6 -1.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_16675 -3.6 -9.4 L D-transpeptidase compare
OLJFJH_05635 -3.6 -2.5 beta family protein compare
OLJFJH_11050 -3.6 -3.4 tRNA-Arg compare
OLJFJH_01595 -3.6 -8.2 phosphoserine phosphatase compare
OLJFJH_14045 -3.6 -3.3 transcriptional regulator compare
OLJFJH_15720 -3.5 -13.1 glucan biosynthesis glucosyltransferase H compare
OLJFJH_16980 -3.5 -16.2 citrate synthase compare
OLJFJH_06040 -3.5 -8.9 glycerol kinase GlpK compare
OLJFJH_06205 -3.4 -2.3 Protein of unknown function DUF compare
OLJFJH_10855 -3.4 -12.5 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_05510 -3.4 -5.1 ribosome-dependent GTPase TypA compare
OLJFJH_16935 -3.2 -13.0 succinate--CoA ligase subunit alpha compare
OLJFJH_16900 -3.2 -2.2 cell division protein CpoB compare
OLJFJH_16045 -3.2 -11.6 aromatic amino acid aminotransferase compare
OLJFJH_07025 -3.2 -20.0 sulfite reductase subunit alpha compare
OLJFJH_16055 -3.2 -4.5 DUF882 domain-containing protein compare
OLJFJH_11445 -3.2 -3.9 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_06325 -3.2 -9.6 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
OLJFJH_07100 -3.2 -15.8 calcium/sodium antiporter compare
OLJFJH_06330 -3.1 -12.6 ECA oligosaccharide polymerase compare
OLJFJH_06100 -3.1 -14.9 bifunctional aspartate kinase/homoserine dehydrogenase II compare
OLJFJH_16780 -3.0 -4.1 6-phosphogluconolactonase compare
OLJFJH_06110 -3.0 -19.9 Phosphoenolpyruvate carboxylase compare
OLJFJH_06290 -3.0 -12.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
OLJFJH_11240 -3.0 -6.8 tRNA pseudouridine(38-40) synthase TruA compare
OLJFJH_17985 -3.0 -5.5 trigger factor compare
OLJFJH_00700 -3.0 -3.8 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_07030 -3.0 -22.8 glutamate synthase large subunit compare
OLJFJH_06270 -3.0 -5.9 thioredoxin TrxA compare
OLJFJH_13885 -2.9 -4.4 hypothetical protein compare
OLJFJH_01730 -2.9 -1.9 hypothetical protein compare
OLJFJH_16955 -2.9 -2.0 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_11595 -2.8 -4.3 FAD:protein FMN transferase ApbE compare
OLJFJH_09310 -2.8 -10.4 phosphoadenylyl-sulfate reductase compare
OLJFJH_01400 -2.8 -13.0 carbamoyl phosphate synthase small subunit compare
OLJFJH_16940 -2.7 -8.3 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_16960 -2.7 -1.9 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_07015 -2.7 -3.2 stringent starvation protein A compare
OLJFJH_01395 -2.7 -11.3 carbamoyl-phosphate synthase large subunit compare
OLJFJH_07465 -2.7 -13.6 DNA phosphorothioation system sulfurtransferase DndC compare
OLJFJH_15205 -2.6 -9.3 muramoyltetrapeptide carboxypeptidase compare
OLJFJH_06335 -2.6 -9.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
OLJFJH_16575 -2.6 -6.7 helix-turn-helix-type transcriptional regulator compare
OLJFJH_07070 -2.6 -10.5 RNA polymerase factor sigma-54 compare
OLJFJH_10860 -2.6 -2.6 phosphocarrier protein Hpr compare
OLJFJH_04160 -2.6 -6.0 two-component system response regulator OmpR compare
OLJFJH_06315 -2.6 -9.9 dTDP-4-amino-4 6-dideoxygalactose transaminase compare
OLJFJH_00645 -2.6 -1.9 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
OLJFJH_10165 -2.6 -1.7 RnfH family protein compare
OLJFJH_05835 -2.5 -5.1 glycosyl transferase compare
OLJFJH_15060 -2.5 -1.2 type III secretion system protein compare
OLJFJH_07020 -2.5 -4.1 ClpXP protease specificity-enhancing factor compare
OLJFJH_03950 -2.5 -1.1 DUF2387 domain-containing protein compare
OLJFJH_06045 -2.5 -8.1 aquaporin compare
OLJFJH_09105 -2.5 -3.7 exodeoxyribonuclease V subunit alpha compare
OLJFJH_10850 -2.5 -4.2 PTS glucose transporter subunit IIA compare
OLJFJH_09335 -2.5 -9.3 Adenylyl-sulfate kinase compare
OLJFJH_10230 -2.5 -4.6 SoxR-reducing system protein RseC compare
OLJFJH_11930 -2.4 -7.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_16180 -2.4 -4.9 cell division protein FtsK compare
OLJFJH_12195 -2.4 -13.1 putrescine/spermidine ABC transporter compare
OLJFJH_03200 -2.4 -6.5 TonB-dependent siderophore receptor compare
OLJFJH_10865 -2.4 -1.8 cysteine synthase A compare
OLJFJH_17635 -2.4 -11.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_08735 -2.3 -10.5 phosphoglycerate dehydrogenase compare
OLJFJH_05630 -2.3 -0.8 sce7726 family protein compare
OLJFJH_16215 -2.3 -13.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
OLJFJH_06280 -2.3 -13.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
OLJFJH_07000 -2.3 -13.3 cell division protein ZapE compare
OLJFJH_06415 -2.3 -4.6 tyrosine recombinase XerC compare
OLJFJH_05500 -2.3 -11.8 nitrogen regulation protein NR(II) compare
OLJFJH_15570 -2.3 -7.6 ribonuclease E compare
OLJFJH_16965 -2.3 -1.6 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_06200 -2.3 -5.0 HTH-type transcriptional regulator HdfR compare
OLJFJH_17780 -2.3 -8.5 DUF6024 domain-containing protein compare
OLJFJH_06320 -2.3 -5.0 lipid III flippase WzxE compare
OLJFJH_01370 -2.2 -3.3 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_04440 -2.2 -9.8 MurR/RpiR family transcriptional regulator compare
OLJFJH_13285 -2.2 -11.3 two-component system response regulator RssB compare
OLJFJH_16190 -2.2 -6.9 thioredoxin-disulfide reductase compare
OLJFJH_06545 -2.2 -1.5 NAD(P)H-flavin reductase compare
OLJFJH_11455 -2.2 -1.1 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_06735 -2.2 -14.2 thiamine phosphate synthase compare
OLJFJH_11470 -2.1 -8.1 NADH-quinone oxidoreductase subunit NuoN compare
OLJFJH_11460 -2.1 -11.3 NADH-quinone oxidoreductase subunit L compare
OLJFJH_07460 -2.1 -8.3 DNA sulfur modification protein DndD compare
OLJFJH_04990 -2.1 -2.9 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_18025 -2.1 -2.4 heme o synthase compare
OLJFJH_05565 -2.1 -1.6 DNA-directed RNA polymerase subunit omega compare
OLJFJH_06295 -2.1 -7.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
OLJFJH_11440 -2.1 -4.3 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_03535 -2.0 -1.5 hypothetical protein compare
OLJFJH_06310 -2.0 -5.1 dTDP-4-amino-4 6-dideoxy-D-galactose acyltransferase compare
OLJFJH_11420 -2.0 -7.7 NADH-quinone oxidoreductase subunit C/D compare
OLJFJH_17040 -2.0 -2.0 replication initiation negative regulator SeqA compare
OLJFJH_05845 -2.0 -7.6 putative lipopolysaccharide heptosyltransferase III compare
OLJFJH_01655 -2.0 -6.5 peptide chain release factor 3 compare
OLJFJH_04800 -2.0 -16.2 peptidase M16 compare
OLJFJH_01600 -2.0 -10.9 YtjB family periplasmic protein compare
OLJFJH_06305 -2.0 -8.6 glucose-1-phosphate thymidylyltransferase RfbA compare
OLJFJH_17960 -2.0 -6.8 endopeptidase La compare
OLJFJH_11365 -2.0 -5.6 acetate kinase compare
OLJFJH_17775 -2.0 -10.4 EamA-like transporter family compare
OLJFJH_10445 -2.0 -5.3 cytoskeleton protein RodZ compare
OLJFJH_01945 -1.9 -1.4 DUF1435 domain-containing protein compare
OLJFJH_11435 -1.9 -7.6 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_16760 -1.9 -8.1 biotin synthase BioB compare
OLJFJH_11415 -1.9 -9.8 NADH-quinone oxidoreductase subunit B compare
OLJFJH_11750 -1.9 -11.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
OLJFJH_05850 -1.9 -8.0 deacetylase compare
OLJFJH_18015 -1.9 -2.2 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_07110 -1.9 -5.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
OLJFJH_06410 -1.9 -6.9 DUF484 domain-containing protein compare
OLJFJH_03565 -1.9 -3.8 zinc uptake transcriptional repressor Zur compare
OLJFJH_10465 -1.9 -1.3 outer membrane protein assembly factor BamB compare
OLJFJH_15700 -1.9 -2.3 rhodanese-related sulfurtransferase compare
OLJFJH_11410 -1.9 -5.1 NADH-quinone oxidoreductase subunit NuoA compare
OLJFJH_01825 -1.9 -11.2 serine/threonine phosphatase compare
OLJFJH_11465 -1.9 -7.2 NADH-quinone oxidoreductase subunit M compare
OLJFJH_07380 -1.9 -10.0 leucyl aminopeptidase compare
OLJFJH_12850 -1.8 -2.0 crossover junction endodeoxyribonuclease RuvC compare
OLJFJH_10245 -1.8 -3.9 translation elongation factor 4 compare
OLJFJH_18645 -1.8 -14.5 murein transglycosylase D compare
OLJFJH_11275 -1.8 -7.3 colicin V production protein compare
OLJFJH_07320 -1.8 -6.2 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_03170 -1.8 -1.1 hypothetical protein compare
OLJFJH_14950 -1.8 -4.7 redox-regulated ATPase YchF compare
OLJFJH_11430 -1.8 -7.2 NADH-quinone oxidoreductase subunit NuoF compare
OLJFJH_18020 -1.7 -2.3 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_05495 -1.7 -9.2 nitrogen regulation protein NR(I) compare
OLJFJH_07050 -1.7 -5.2 PTS phosphocarrier protein NPr compare
OLJFJH_09370 -1.7 -7.6 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
OLJFJH_05920 -1.7 -2.0 serine O-acetyltransferase compare
OLJFJH_10825 -1.7 -8.0 sulfate/thiosulfate ABC transporter permease CysW compare
OLJFJH_05910 -1.7 -5.7 protein-export chaperone SecB compare
OLJFJH_07270 -1.7 -5.4 lipoprotein NlpI compare
OLJFJH_08570 -1.7 -7.4 glutathione synthase compare
OLJFJH_07330 -1.6 -9.2 aspartate carbamoyltransferase compare
OLJFJH_10685 -1.6 -1.7 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_05550 -1.6 -7.8 ATP-dependent DNA helicase RecG compare
OLJFJH_18010 -1.6 -2.2 cytochrome o ubiquinol oxidase subunit I compare
OLJFJH_18125 -1.6 -5.7 tRNA guanosine(34) transglycosylase Tgt compare
OLJFJH_05045 -1.6 -8.3 DeoR/GlpR transcriptional regulator compare
OLJFJH_11925 -1.6 -2.3 hydroxyethylthiazole kinase compare
OLJFJH_04155 -1.6 -4.0 two-component system sensor histidine kinase EnvZ compare
OLJFJH_10940 -1.6 -1.2 tRNA-Ala compare
OLJFJH_15185 -1.5 -1.8 GlsB/YeaQ/YmgE family stress response membrane protein compare
OLJFJH_06520 -1.5 -5.4 Sec-independent protein translocase protein TatB compare
OLJFJH_15520 -1.5 -4.3 beta-ketoacyl-ACP synthase II compare
OLJFJH_13720 -1.5 -9.1 oligopeptide ABC transporter substrate-binding protein OppA compare
OLJFJH_02420 -1.5 -7.5 FKBP-type peptidyl-prolyl cis-trans isomerase compare
OLJFJH_10820 -1.5 -5.3 sulfate/thiosulfate ABC transporter permease CysT compare
OLJFJH_08530 -1.5 -8.4 YggS family pyridoxal phosphate enzyme compare
OLJFJH_09305 -1.5 -5.5 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_07265 -1.5 -4.7 polyribonucleotide nucleotidyltransferase compare
OLJFJH_17130 -1.5 -1.0 tRNA-Gln compare
OLJFJH_06380 -1.4 -7.2 uroporphyrinogen-III C-methyltransferase compare
OLJFJH_13585 -1.4 -1.3 hypothetical protein compare
OLJFJH_04085 -1.4 -6.3 cell division protein DamX compare
OLJFJH_04080 -1.4 -1.0 adenine-specific DNA-methyltransferase compare
OLJFJH_09575 -1.4 -3.4 recombinase RecA compare
OLJFJH_07675 -1.4 -7.6 outer membrane channel protein TolC compare
OLJFJH_17845 -1.4 -8.6 multidrug efflux transporter transcriptional repressor AcrR compare
OLJFJH_11120 -1.4 -8.9 phospholipid-binding lipoprotein MlaA compare
OLJFJH_16040 -1.4 -8.2 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_10215 -1.4 -5.4 RNA polymerase sigma factor RpoE compare
OLJFJH_00815 -1.4 -2.8 hypoxanthine phosphoribosyltransferase compare


Specific Phenotypes

None in this experiment