Experiment set5S167 for Erwinia amylovora T8

Compare to:

Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8

200 most important genes:

  gene name fitness t score description  
OLJFJH_16185 -4.4 -2.3 leucine-responsive transcriptional regulator Lrp compare
OLJFJH_03710 -3.0 -0.9 peptide deformylase compare
OLJFJH_17325 -2.8 -4.7 cytochrome d ubiquinol oxidase subunit II compare
OLJFJH_16195 -2.7 -4.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
OLJFJH_16055 -2.5 -3.7 DUF882 domain-containing protein compare
OLJFJH_05635 -2.5 -1.5 beta family protein compare
OLJFJH_15205 -2.5 -6.7 muramoyltetrapeptide carboxypeptidase compare
OLJFJH_02365 -2.4 -2.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
OLJFJH_17320 -2.4 -10.8 cytochrome ubiquinol oxidase subunit I compare
OLJFJH_06100 -2.2 -11.4 bifunctional aspartate kinase/homoserine dehydrogenase II compare
OLJFJH_00700 -2.2 -2.5 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_09610 -2.2 -0.9 tRNA-Arg compare
OLJFJH_03640 -2.2 -8.3 lysine-sensitive aspartokinase 3 compare
OLJFJH_16430 -2.2 -0.9 hypothetical protein compare
OLJFJH_10855 -2.1 -7.8 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_00695 -2.1 -2.8 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_15990 -2.1 -4.4 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_06110 -2.0 -11.2 Phosphoenolpyruvate carboxylase compare
OLJFJH_10590 -2.0 -5.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_04810 -1.9 -11.6 biofilm formation regulator HmsP compare
OLJFJH_07100 -1.9 -10.4 calcium/sodium antiporter compare
OLJFJH_11455 -1.9 -0.8 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_07465 -1.9 -11.5 DNA phosphorothioation system sulfurtransferase DndC compare
OLJFJH_16200 -1.9 -5.4 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
OLJFJH_06780 -1.8 -8.7 phosphoribosylamine--glycine ligase compare
OLJFJH_01395 -1.8 -7.7 carbamoyl-phosphate synthase large subunit compare
OLJFJH_06270 -1.8 -3.2 thioredoxin TrxA compare
OLJFJH_16980 -1.8 -10.9 citrate synthase compare
OLJFJH_13440 -1.8 -1.2 TonB system transport protein TonB compare
OLJFJH_16045 -1.8 -6.8 aromatic amino acid aminotransferase compare
OLJFJH_12195 -1.8 -9.6 putrescine/spermidine ABC transporter compare
OLJFJH_10850 -1.7 -2.1 PTS glucose transporter subunit IIA compare
OLJFJH_06145 -1.7 -11.0 Si-specific NAD(P)(+) transhydrogenase compare
OLJFJH_03170 -1.7 -0.9 hypothetical protein compare
OLJFJH_10305 -1.7 -9.9 phosphoribosylformylglycinamidine synthase compare
OLJFJH_13645 -1.7 -6.0 peptide ABC transporter ATP-binding protein SapD compare
OLJFJH_14150 -1.6 -0.7 osmotically-inducible lipoprotein B compare
OLJFJH_16215 -1.6 -9.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
OLJFJH_08610 -1.6 -3.1 agmatinase compare
OLJFJH_01600 -1.6 -8.0 YtjB family periplasmic protein compare
OLJFJH_18630 -1.6 -0.9 ribonuclease HI compare
OLJFJH_14015 -1.6 -1.0 Putative sugar transport protein compare
OLJFJH_13655 -1.5 -7.2 putrescine ABC transporter permease SapB compare
OLJFJH_07030 -1.5 -12.3 glutamate synthase large subunit compare
OLJFJH_01045 -1.5 -6.6 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
OLJFJH_07460 -1.5 -6.3 DNA sulfur modification protein DndD compare
OLJFJH_07060 -1.5 -2.7 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_10445 -1.5 -4.8 cytoskeleton protein RodZ compare
OLJFJH_05770 -1.5 -2.5 orotate phosphoribosyltransferase compare
OLJFJH_07025 -1.5 -9.1 sulfite reductase subunit alpha compare
OLJFJH_15725 -1.4 -3.2 glucan biosynthesis protein G compare
OLJFJH_09490 -1.4 -1.5 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
OLJFJH_10865 -1.4 -1.1 cysteine synthase A compare
OLJFJH_15670 -1.4 -3.1 dihydroorotase compare
OLJFJH_16675 -1.4 -5.4 L D-transpeptidase compare
OLJFJH_18265 -1.4 -0.9 YaiA compare
OLJFJH_07380 -1.3 -8.2 leucyl aminopeptidase compare
OLJFJH_13570 -1.3 -3.0 orotidine-5'-phosphate decarboxylase compare
OLJFJH_14950 -1.3 -4.1 redox-regulated ATPase YchF compare
OLJFJH_07320 -1.3 -4.1 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_16610 -1.3 -0.9 protein YohO compare
OLJFJH_04160 -1.3 -2.4 two-component system response regulator OmpR compare
OLJFJH_10205 -1.3 -1.4 SAM-dependent methyltransferase compare
OLJFJH_12045 -1.3 -1.5 Amylovoran biosynthesis protein AmsC compare
OLJFJH_16760 -1.3 -6.2 biotin synthase BioB compare
OLJFJH_15705 -1.3 -2.2 lipid A biosynthesis lauroyl acyltransferase compare
OLJFJH_15720 -1.3 -5.5 glucan biosynthesis glucosyltransferase H compare
OLJFJH_01400 -1.3 -6.4 carbamoyl phosphate synthase small subunit compare
OLJFJH_05615 -1.2 -1.4 Conserved uncharacterized protein compare
OLJFJH_01595 -1.2 -2.4 phosphoserine phosphatase compare
OLJFJH_17630 -1.2 -0.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_02090 -1.2 -4.4 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_09725 -1.2 -3.7 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_03725 -1.2 -5.9 Trk system potassium transporter TrkA compare
OLJFJH_07825 -1.2 -3.0 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_08810 -1.2 -3.1 FAD assembly factor SdhE compare
OLJFJH_10035 -1.2 -1.4 flagellar biosynthesis anti-sigma factor FlgM compare
OLJFJH_07000 -1.2 -7.0 cell division protein ZapE compare
OLJFJH_17040 -1.2 -1.0 replication initiation negative regulator SeqA compare
OLJFJH_05955 -1.2 -5.8 6-phosphofructokinase compare
OLJFJH_10860 -1.1 -1.4 phosphocarrier protein Hpr compare
OLJFJH_07830 -1.1 -2.3 TonB system transport protein ExbD compare
OLJFJH_13720 -1.1 -7.8 oligopeptide ABC transporter substrate-binding protein OppA compare
OLJFJH_06570 -1.1 -6.0 Trk system potassium transporter TrkH compare
OLJFJH_07265 -1.1 -3.3 polyribonucleotide nucleotidyltransferase compare
OLJFJH_17800 -1.1 -5.1 molecular chaperone HtpG compare
OLJFJH_07070 -1.1 -5.1 RNA polymerase factor sigma-54 compare
OLJFJH_16940 -1.1 -3.8 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_11240 -1.1 -2.7 tRNA pseudouridine(38-40) synthase TruA compare
OLJFJH_07185 -1.1 -2.8 transcription elongation factor GreA compare
OLJFJH_10215 -1.1 -5.1 RNA polymerase sigma factor RpoE compare
OLJFJH_11280 -1.1 -4.8 amidophosphoribosyltransferase compare
OLJFJH_14555 -1.1 -1.9 pyruvate kinase PykF compare
OLJFJH_05630 -1.1 -0.4 sce7726 family protein compare
OLJFJH_03565 -1.0 -4.3 zinc uptake transcriptional repressor Zur compare
OLJFJH_15570 -1.0 -2.8 ribonuclease E compare
OLJFJH_01945 -1.0 -0.7 DUF1435 domain-containing protein compare
OLJFJH_11200 -1.0 -2.5 hypothetical protein compare
OLJFJH_02420 -1.0 -4.5 FKBP-type peptidyl-prolyl cis-trans isomerase compare
OLJFJH_10720 -1.0 -0.9 Uncharacterised protein family (UPF0370) compare
OLJFJH_08605 -1.0 -1.5 YidB-like protein compare
OLJFJH_13410 -1.0 -3.9 oligopeptide ABC transporter permease OppC compare
OLJFJH_05495 -1.0 -5.2 nitrogen regulation protein NR(I) compare
OLJFJH_17610 -1.0 -4.9 alcohol dehydrogenase AdhP compare
OLJFJH_08395 -1.0 -0.9 tetratricopeptide repeat protein compare
OLJFJH_03200 -1.0 -4.4 TonB-dependent siderophore receptor compare
OLJFJH_16935 -1.0 -5.0 succinate--CoA ligase subunit alpha compare
OLJFJH_12480 -1.0 -3.9 Epoxyqueuosine reductase QueH compare
OLJFJH_10200 -1.0 -3.4 ATP-dependent RNA helicase SrmB compare
OLJFJH_04990 -1.0 -0.9 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_13980 -1.0 -0.6 hypothetical protein compare
OLJFJH_17995 -1.0 -3.3 Uncharacterized lipoprotein compare
OLJFJH_04440 -1.0 -4.6 MurR/RpiR family transcriptional regulator compare
OLJFJH_07090 -0.9 -3.4 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
OLJFJH_17245 -0.9 -3.7 D-alanyl-D-alanine carboxypeptidase DacA compare
OLJFJH_08305 -0.9 -0.7 hypothetical protein compare
OLJFJH_17650 -0.9 -0.5 ABC transporter ATP-binding protein compare
OLJFJH_02695 -0.9 -1.6 hypothetical protein compare
OLJFJH_04800 -0.9 -6.1 peptidase M16 compare
OLJFJH_14605 -0.9 -7.3 Uncharacterized protein YdiJ compare
OLJFJH_17550 -0.9 -0.7 hypothetical protein compare
OLJFJH_18030 -0.9 -5.2 MFS transporter compare
OLJFJH_09370 -0.9 -4.0 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
OLJFJH_13420 -0.9 -5.9 murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF compare
OLJFJH_13560 -0.9 -2.7 DUF1049 domain-containing protein compare
OLJFJH_15335 -0.9 -1.8 antitermination protein compare
OLJFJH_08230 -0.9 -3.2 DNA-binding protein compare
OLJFJH_04155 -0.9 -2.6 two-component system sensor histidine kinase EnvZ compare
OLJFJH_01265 -0.9 -4.5 division/cell wall cluster transcriptional repressor MraZ compare
OLJFJH_05510 -0.9 -1.8 ribosome-dependent GTPase TypA compare
OLJFJH_06520 -0.9 -2.4 Sec-independent protein translocase protein TatB compare
OLJFJH_01370 -0.9 -1.0 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_02245 -0.9 -0.7 YqjK-like family protein compare
OLJFJH_18145 -0.9 -5.5 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
OLJFJH_17635 -0.9 -4.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_00755 -0.9 -2.5 RNA 2' 3'-cyclic phosphodiesterase compare
OLJFJH_00745 -0.9 -6.3 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_09390 -0.8 -0.4 Transposase compare
OLJFJH_06985 -0.8 -4.5 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_13415 -0.8 -3.0 ABC transporter ATP-binding protein compare
OLJFJH_01475 -0.8 -3.5 transaldolase B compare
OLJFJH_11435 -0.8 -3.6 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_08530 -0.8 -4.8 YggS family pyridoxal phosphate enzyme compare
OLJFJH_13650 -0.8 -2.7 peptide ABC transporter permease SapC compare
OLJFJH_11325 -0.8 -3.0 NUDIX hydrolase YfcD compare
OLJFJH_11360 -0.8 -1.1 phosphate acetyltransferase compare
OLJFJH_04935 -0.8 -0.5 Transcriptional regulator compare
OLJFJH_10685 -0.8 -0.9 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_13405 -0.8 -3.4 oligopeptide ABC transporter permease OppB compare
OLJFJH_10815 -0.8 -4.6 sulfate ABC transporter substrate-binding protein compare
OLJFJH_11165 -0.8 -2.8 Sulfite exporter TauE/SafE compare
OLJFJH_06410 -0.8 -2.6 DUF484 domain-containing protein compare
OLJFJH_13335 -0.8 -0.7 heme-binding protein compare
OLJFJH_16180 -0.8 -0.5 cell division protein FtsK compare
OLJFJH_13590 -0.8 -0.7 osmotically-inducible lipoprotein OsmB compare
OLJFJH_12895 -0.8 -4.4 pyruvate kinase compare
OLJFJH_11320 -0.8 -0.7 Uncharacterized GST-like protein yfcF compare
OLJFJH_13615 -0.8 -1.1 DUF2931 domain-containing protein compare
OLJFJH_15805 -0.8 -2.9 GlpM protein compare
OLJFJH_05745 -0.8 -1.5 DUF4102 domain-containing protein compare
OLJFJH_11930 -0.8 -3.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_13910 -0.8 -4.5 TonB-dependent copper receptor compare
OLJFJH_08775 -0.8 -2.6 glycine cleavage system aminomethyltransferase GcvT compare
OLJFJH_05045 -0.8 -3.7 DeoR/GlpR transcriptional regulator compare
OLJFJH_14495 -0.7 -3.4 ribonuclease T compare
OLJFJH_06150 -0.7 -4.9 HTH-type transcriptional repressor FabR compare
OLJFJH_05765 -0.7 -1.8 ribonuclease PH compare
OLJFJH_11090 -0.7 -1.5 heme exporter protein CcmD compare
OLJFJH_05550 -0.7 -3.6 ATP-dependent DNA helicase RecG compare
OLJFJH_05195 -0.7 -2.4 phosphopantetheinyl transferase compare
OLJFJH_09365 -0.7 -3.7 5'/3'-nucleotidase SurE compare
OLJFJH_07485 -0.7 -1.4 Rha family transcriptional regulator compare
OLJFJH_10370 -0.7 -5.2 aminopeptidase PepB compare
OLJFJH_12565 -0.7 -1.7 hypothetical protein compare
OLJFJH_17605 -0.7 -0.8 ribosome-associated protein YbcJ compare
OLJFJH_18095 -0.7 -2.3 transcriptional regulator NrdR compare
OLJFJH_04615 -0.7 -2.5 hypothetical protein compare
OLJFJH_17160 -0.7 -3.7 CNNM family magnesium/cobalt transport protein CorC compare
OLJFJH_11775 -0.7 -2.1 1-phosphofructokinase compare
OLJFJH_11750 -0.7 -3.1 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
OLJFJH_12715 -0.7 -2.1 flagellar transcriptional regulator FlhD compare
OLJFJH_10820 -0.7 -3.4 sulfate/thiosulfate ABC transporter permease CysT compare
OLJFJH_17330 -0.7 -2.8 CsbD family protein compare
OLJFJH_05910 -0.7 -3.7 protein-export chaperone SecB compare
OLJFJH_04620 -0.7 -0.7 Inversin compare
OLJFJH_14725 -0.7 -0.9 Endoribonuclease GhoS compare
OLJFJH_16190 -0.7 -2.7 thioredoxin-disulfide reductase compare
OLJFJH_15520 -0.7 -1.6 beta-ketoacyl-ACP synthase II compare
OLJFJH_01720 -0.7 -0.8 hypothetical protein compare
OLJFJH_14145 -0.7 -2.4 GNAT family N-acetyltransferase compare
OLJFJH_18640 -0.7 -2.0 hydroxyacylglutathione hydrolase compare
OLJFJH_06025 -0.7 -4.2 multidrug efflux MFS transporter EmrD compare
OLJFJH_07515 -0.7 -3.0 TA system toxin CbtA family protein compare
OLJFJH_14930 -0.7 -2.5 stress-induced protein YchH compare
OLJFJH_15075 -0.7 -0.6 type III secretion system inner rod subunit SctI compare
OLJFJH_10660 -0.7 -0.6 hypothetical protein compare
OLJFJH_10645 -0.7 -1.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_06395 -0.7 -3.2 class I adenylate cyclase compare
OLJFJH_11590 -0.7 -2.4 hypothetical protein compare
OLJFJH_06380 -0.7 -3.0 uroporphyrinogen-III C-methyltransferase compare


Specific Phenotypes

For 3 genes in this experiment