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Experiment set5S167 for
Erwinia amylovora T8
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Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8
200 most important genes:
gene
name
fitness
t score
description
OLJFJH
_16185
-4.4
-2.3
leucine-responsive transcriptional regulator Lrp
compare
OLJFJH
_03710
-3.0
-0.9
peptide deformylase
compare
OLJFJH
_17325
-2.8
-4.7
cytochrome d ubiquinol oxidase subunit II
compare
OLJFJH
_16195
-2.7
-4.8
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
compare
OLJFJH
_16055
-2.5
-3.7
DUF882 domain-containing protein
compare
OLJFJH
_05635
-2.5
-1.5
beta family protein
compare
OLJFJH
_15205
-2.5
-6.7
muramoyltetrapeptide carboxypeptidase
compare
OLJFJH
_02365
-2.4
-2.9
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
compare
OLJFJH
_17320
-2.4
-10.8
cytochrome ubiquinol oxidase subunit I
compare
OLJFJH
_06100
-2.2
-11.4
bifunctional aspartate kinase/homoserine dehydrogenase II
compare
OLJFJH
_00700
-2.2
-2.5
Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC
compare
OLJFJH
_09610
-2.2
-0.9
tRNA-Arg
compare
OLJFJH
_03640
-2.2
-8.3
lysine-sensitive aspartokinase 3
compare
OLJFJH
_16430
-2.2
-0.9
hypothetical protein
compare
OLJFJH
_10855
-2.1
-7.8
phosphoenolpyruvate-protein phosphotransferase PtsI
compare
OLJFJH
_00695
-2.1
-2.8
Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD
compare
OLJFJH
_15990
-2.1
-4.4
quinone-dependent dihydroorotate dehydrogenase
compare
OLJFJH
_06110
-2.0
-11.2
Phosphoenolpyruvate carboxylase
compare
OLJFJH
_10590
-2.0
-5.9
Phosphoribosylformylglycinamidine cyclo-ligase
compare
OLJFJH
_04810
-1.9
-11.6
biofilm formation regulator HmsP
compare
OLJFJH
_07100
-1.9
-10.4
calcium/sodium antiporter
compare
OLJFJH
_11455
-1.9
-0.8
NADH-quinone oxidoreductase subunit NuoK
compare
OLJFJH
_07465
-1.9
-11.5
DNA phosphorothioation system sulfurtransferase DndC
compare
OLJFJH
_16200
-1.9
-5.4
cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
compare
OLJFJH
_06780
-1.8
-8.7
phosphoribosylamine--glycine ligase
compare
OLJFJH
_01395
-1.8
-7.7
carbamoyl-phosphate synthase large subunit
compare
OLJFJH
_06270
-1.8
-3.2
thioredoxin TrxA
compare
OLJFJH
_16980
-1.8
-10.9
citrate synthase
compare
OLJFJH
_13440
-1.8
-1.2
TonB system transport protein TonB
compare
OLJFJH
_16045
-1.8
-6.8
aromatic amino acid aminotransferase
compare
OLJFJH
_12195
-1.8
-9.6
putrescine/spermidine ABC transporter
compare
OLJFJH
_10850
-1.7
-2.1
PTS glucose transporter subunit IIA
compare
OLJFJH
_06145
-1.7
-11.0
Si-specific NAD(P)(+) transhydrogenase
compare
OLJFJH
_03170
-1.7
-0.9
hypothetical protein
compare
OLJFJH
_10305
-1.7
-9.9
phosphoribosylformylglycinamidine synthase
compare
OLJFJH
_13645
-1.7
-6.0
peptide ABC transporter ATP-binding protein SapD
compare
OLJFJH
_14150
-1.6
-0.7
osmotically-inducible lipoprotein B
compare
OLJFJH
_16215
-1.6
-9.2
ATP-dependent Clp protease ATP-binding subunit ClpA
compare
OLJFJH
_08610
-1.6
-3.1
agmatinase
compare
OLJFJH
_01600
-1.6
-8.0
YtjB family periplasmic protein
compare
OLJFJH
_18630
-1.6
-0.9
ribonuclease HI
compare
OLJFJH
_14015
-1.6
-1.0
Putative sugar transport protein
compare
OLJFJH
_13655
-1.5
-7.2
putrescine ABC transporter permease SapB
compare
OLJFJH
_07030
-1.5
-12.3
glutamate synthase large subunit
compare
OLJFJH
_01045
-1.5
-6.6
1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
compare
OLJFJH
_07460
-1.5
-6.3
DNA sulfur modification protein DndD
compare
OLJFJH
_07060
-1.5
-2.7
PTS IIA-like nitrogen regulatory protein PtsN
compare
OLJFJH
_10445
-1.5
-4.8
cytoskeleton protein RodZ
compare
OLJFJH
_05770
-1.5
-2.5
orotate phosphoribosyltransferase
compare
OLJFJH
_07025
-1.5
-9.1
sulfite reductase subunit alpha
compare
OLJFJH
_15725
-1.4
-3.2
glucan biosynthesis protein G
compare
OLJFJH
_09490
-1.4
-1.5
EscR/YscR/HrcR family type III secretion system export apparatus protein
compare
OLJFJH
_10865
-1.4
-1.1
cysteine synthase A
compare
OLJFJH
_15670
-1.4
-3.1
dihydroorotase
compare
OLJFJH
_16675
-1.4
-5.4
L D-transpeptidase
compare
OLJFJH
_18265
-1.4
-0.9
YaiA
compare
OLJFJH
_07380
-1.3
-8.2
leucyl aminopeptidase
compare
OLJFJH
_13570
-1.3
-3.0
orotidine-5'-phosphate decarboxylase
compare
OLJFJH
_14950
-1.3
-4.1
redox-regulated ATPase YchF
compare
OLJFJH
_07320
-1.3
-4.1
2-iminobutanoate/2-iminopropanoate deaminase
compare
OLJFJH
_16610
-1.3
-0.9
protein YohO
compare
OLJFJH
_04160
-1.3
-2.4
two-component system response regulator OmpR
compare
OLJFJH
_10205
-1.3
-1.4
SAM-dependent methyltransferase
compare
OLJFJH
_12045
-1.3
-1.5
Amylovoran biosynthesis protein AmsC
compare
OLJFJH
_16760
-1.3
-6.2
biotin synthase BioB
compare
OLJFJH
_15705
-1.3
-2.2
lipid A biosynthesis lauroyl acyltransferase
compare
OLJFJH
_15720
-1.3
-5.5
glucan biosynthesis glucosyltransferase H
compare
OLJFJH
_01400
-1.3
-6.4
carbamoyl phosphate synthase small subunit
compare
OLJFJH
_05615
-1.2
-1.4
Conserved uncharacterized protein
compare
OLJFJH
_01595
-1.2
-2.4
phosphoserine phosphatase
compare
OLJFJH
_17630
-1.2
-0.6
5-(carboxyamino)imidazole ribonucleotide mutase
compare
OLJFJH
_02090
-1.2
-4.4
sorbitol-6-phosphate dehydrogenase
compare
OLJFJH
_09725
-1.2
-3.7
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
compare
OLJFJH
_03725
-1.2
-5.9
Trk system potassium transporter TrkA
compare
OLJFJH
_07825
-1.2
-3.0
tol-pal system-associated acyl-CoA thioesterase
compare
OLJFJH
_08810
-1.2
-3.1
FAD assembly factor SdhE
compare
OLJFJH
_10035
-1.2
-1.4
flagellar biosynthesis anti-sigma factor FlgM
compare
OLJFJH
_07000
-1.2
-7.0
cell division protein ZapE
compare
OLJFJH
_17040
-1.2
-1.0
replication initiation negative regulator SeqA
compare
OLJFJH
_05955
-1.2
-5.8
6-phosphofructokinase
compare
OLJFJH
_10860
-1.1
-1.4
phosphocarrier protein Hpr
compare
OLJFJH
_07830
-1.1
-2.3
TonB system transport protein ExbD
compare
OLJFJH
_13720
-1.1
-7.8
oligopeptide ABC transporter substrate-binding protein OppA
compare
OLJFJH
_06570
-1.1
-6.0
Trk system potassium transporter TrkH
compare
OLJFJH
_07265
-1.1
-3.3
polyribonucleotide nucleotidyltransferase
compare
OLJFJH
_17800
-1.1
-5.1
molecular chaperone HtpG
compare
OLJFJH
_07070
-1.1
-5.1
RNA polymerase factor sigma-54
compare
OLJFJH
_16940
-1.1
-3.8
ADP-forming succinate--CoA ligase subunit beta
compare
OLJFJH
_11240
-1.1
-2.7
tRNA pseudouridine(38-40) synthase TruA
compare
OLJFJH
_07185
-1.1
-2.8
transcription elongation factor GreA
compare
OLJFJH
_10215
-1.1
-5.1
RNA polymerase sigma factor RpoE
compare
OLJFJH
_11280
-1.1
-4.8
amidophosphoribosyltransferase
compare
OLJFJH
_14555
-1.1
-1.9
pyruvate kinase PykF
compare
OLJFJH
_05630
-1.1
-0.4
sce7726 family protein
compare
OLJFJH
_03565
-1.0
-4.3
zinc uptake transcriptional repressor Zur
compare
OLJFJH
_15570
-1.0
-2.8
ribonuclease E
compare
OLJFJH
_01945
-1.0
-0.7
DUF1435 domain-containing protein
compare
OLJFJH
_11200
-1.0
-2.5
hypothetical protein
compare
OLJFJH
_02420
-1.0
-4.5
FKBP-type peptidyl-prolyl cis-trans isomerase
compare
OLJFJH
_10720
-1.0
-0.9
Uncharacterised protein family (UPF0370)
compare
OLJFJH
_08605
-1.0
-1.5
YidB-like protein
compare
OLJFJH
_13410
-1.0
-3.9
oligopeptide ABC transporter permease OppC
compare
OLJFJH
_05495
-1.0
-5.2
nitrogen regulation protein NR(I)
compare
OLJFJH
_17610
-1.0
-4.9
alcohol dehydrogenase AdhP
compare
OLJFJH
_08395
-1.0
-0.9
tetratricopeptide repeat protein
compare
OLJFJH
_03200
-1.0
-4.4
TonB-dependent siderophore receptor
compare
OLJFJH
_16935
-1.0
-5.0
succinate--CoA ligase subunit alpha
compare
OLJFJH
_12480
-1.0
-3.9
Epoxyqueuosine reductase QueH
compare
OLJFJH
_10200
-1.0
-3.4
ATP-dependent RNA helicase SrmB
compare
OLJFJH
_04990
-1.0
-0.9
mannitol-1-phosphate 5-dehydrogenase
compare
OLJFJH
_13980
-1.0
-0.6
hypothetical protein
compare
OLJFJH
_17995
-1.0
-3.3
Uncharacterized lipoprotein
compare
OLJFJH
_04440
-1.0
-4.6
MurR/RpiR family transcriptional regulator
compare
OLJFJH
_07090
-0.9
-3.4
3-deoxy-manno-octulosonate-8-phosphatase KdsC
compare
OLJFJH
_17245
-0.9
-3.7
D-alanyl-D-alanine carboxypeptidase DacA
compare
OLJFJH
_08305
-0.9
-0.7
hypothetical protein
compare
OLJFJH
_17650
-0.9
-0.5
ABC transporter ATP-binding protein
compare
OLJFJH
_02695
-0.9
-1.6
hypothetical protein
compare
OLJFJH
_04800
-0.9
-6.1
peptidase M16
compare
OLJFJH
_14605
-0.9
-7.3
Uncharacterized protein YdiJ
compare
OLJFJH
_17550
-0.9
-0.7
hypothetical protein
compare
OLJFJH
_18030
-0.9
-5.2
MFS transporter
compare
OLJFJH
_09370
-0.9
-4.0
protein-L-isoaspartate(D-aspartate) O-methyltransferase
compare
OLJFJH
_13420
-0.9
-5.9
murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
compare
OLJFJH
_13560
-0.9
-2.7
DUF1049 domain-containing protein
compare
OLJFJH
_15335
-0.9
-1.8
antitermination protein
compare
OLJFJH
_08230
-0.9
-3.2
DNA-binding protein
compare
OLJFJH
_04155
-0.9
-2.6
two-component system sensor histidine kinase EnvZ
compare
OLJFJH
_01265
-0.9
-4.5
division/cell wall cluster transcriptional repressor MraZ
compare
OLJFJH
_05510
-0.9
-1.8
ribosome-dependent GTPase TypA
compare
OLJFJH
_06520
-0.9
-2.4
Sec-independent protein translocase protein TatB
compare
OLJFJH
_01370
-0.9
-1.0
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
compare
OLJFJH
_02245
-0.9
-0.7
YqjK-like family protein
compare
OLJFJH
_18145
-0.9
-5.5
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
compare
OLJFJH
_17635
-0.9
-4.5
5-(carboxyamino)imidazole ribonucleotide synthase
compare
OLJFJH
_00755
-0.9
-2.5
RNA 2' 3'-cyclic phosphodiesterase
compare
OLJFJH
_00745
-0.9
-6.3
bifunctional glycosyl transferase/transpeptidase
compare
OLJFJH
_09390
-0.8
-0.4
Transposase
compare
OLJFJH
_06985
-0.8
-4.5
outer membrane-stress sensor serine endopeptidase DegS
compare
OLJFJH
_13415
-0.8
-3.0
ABC transporter ATP-binding protein
compare
OLJFJH
_01475
-0.8
-3.5
transaldolase B
compare
OLJFJH
_11435
-0.8
-3.6
NADH-quinone oxidoreductase subunit NuoG
compare
OLJFJH
_08530
-0.8
-4.8
YggS family pyridoxal phosphate enzyme
compare
OLJFJH
_13650
-0.8
-2.7
peptide ABC transporter permease SapC
compare
OLJFJH
_11325
-0.8
-3.0
NUDIX hydrolase YfcD
compare
OLJFJH
_11360
-0.8
-1.1
phosphate acetyltransferase
compare
OLJFJH
_04935
-0.8
-0.5
Transcriptional regulator
compare
OLJFJH
_10685
-0.8
-0.9
Colicin immunity protein/pyocin immunity protein
compare
OLJFJH
_13405
-0.8
-3.4
oligopeptide ABC transporter permease OppB
compare
OLJFJH
_10815
-0.8
-4.6
sulfate ABC transporter substrate-binding protein
compare
OLJFJH
_11165
-0.8
-2.8
Sulfite exporter TauE/SafE
compare
OLJFJH
_06410
-0.8
-2.6
DUF484 domain-containing protein
compare
OLJFJH
_13335
-0.8
-0.7
heme-binding protein
compare
OLJFJH
_16180
-0.8
-0.5
cell division protein FtsK
compare
OLJFJH
_13590
-0.8
-0.7
osmotically-inducible lipoprotein OsmB
compare
OLJFJH
_12895
-0.8
-4.4
pyruvate kinase
compare
OLJFJH
_11320
-0.8
-0.7
Uncharacterized GST-like protein yfcF
compare
OLJFJH
_13615
-0.8
-1.1
DUF2931 domain-containing protein
compare
OLJFJH
_15805
-0.8
-2.9
GlpM protein
compare
OLJFJH
_05745
-0.8
-1.5
DUF4102 domain-containing protein
compare
OLJFJH
_11930
-0.8
-3.3
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
compare
OLJFJH
_13910
-0.8
-4.5
TonB-dependent copper receptor
compare
OLJFJH
_08775
-0.8
-2.6
glycine cleavage system aminomethyltransferase GcvT
compare
OLJFJH
_05045
-0.8
-3.7
DeoR/GlpR transcriptional regulator
compare
OLJFJH
_14495
-0.7
-3.4
ribonuclease T
compare
OLJFJH
_06150
-0.7
-4.9
HTH-type transcriptional repressor FabR
compare
OLJFJH
_05765
-0.7
-1.8
ribonuclease PH
compare
OLJFJH
_11090
-0.7
-1.5
heme exporter protein CcmD
compare
OLJFJH
_05550
-0.7
-3.6
ATP-dependent DNA helicase RecG
compare
OLJFJH
_05195
-0.7
-2.4
phosphopantetheinyl transferase
compare
OLJFJH
_09365
-0.7
-3.7
5'/3'-nucleotidase SurE
compare
OLJFJH
_07485
-0.7
-1.4
Rha family transcriptional regulator
compare
OLJFJH
_10370
-0.7
-5.2
aminopeptidase PepB
compare
OLJFJH
_12565
-0.7
-1.7
hypothetical protein
compare
OLJFJH
_17605
-0.7
-0.8
ribosome-associated protein YbcJ
compare
OLJFJH
_18095
-0.7
-2.3
transcriptional regulator NrdR
compare
OLJFJH
_04615
-0.7
-2.5
hypothetical protein
compare
OLJFJH
_17160
-0.7
-3.7
CNNM family magnesium/cobalt transport protein CorC
compare
OLJFJH
_11775
-0.7
-2.1
1-phosphofructokinase
compare
OLJFJH
_11750
-0.7
-3.1
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
compare
OLJFJH
_12715
-0.7
-2.1
flagellar transcriptional regulator FlhD
compare
OLJFJH
_10820
-0.7
-3.4
sulfate/thiosulfate ABC transporter permease CysT
compare
OLJFJH
_17330
-0.7
-2.8
CsbD family protein
compare
OLJFJH
_05910
-0.7
-3.7
protein-export chaperone SecB
compare
OLJFJH
_04620
-0.7
-0.7
Inversin
compare
OLJFJH
_14725
-0.7
-0.9
Endoribonuclease GhoS
compare
OLJFJH
_16190
-0.7
-2.7
thioredoxin-disulfide reductase
compare
OLJFJH
_15520
-0.7
-1.6
beta-ketoacyl-ACP synthase II
compare
OLJFJH
_01720
-0.7
-0.8
hypothetical protein
compare
OLJFJH
_14145
-0.7
-2.4
GNAT family N-acetyltransferase
compare
OLJFJH
_18640
-0.7
-2.0
hydroxyacylglutathione hydrolase
compare
OLJFJH
_06025
-0.7
-4.2
multidrug efflux MFS transporter EmrD
compare
OLJFJH
_07515
-0.7
-3.0
TA system toxin CbtA family protein
compare
OLJFJH
_14930
-0.7
-2.5
stress-induced protein YchH
compare
OLJFJH
_15075
-0.7
-0.6
type III secretion system inner rod subunit SctI
compare
OLJFJH
_10660
-0.7
-0.6
hypothetical protein
compare
OLJFJH
_10645
-0.7
-1.2
phosphoribosylaminoimidazolesuccinocarboxamide synthase
compare
OLJFJH
_06395
-0.7
-3.2
class I adenylate cyclase
compare
OLJFJH
_11590
-0.7
-2.4
hypothetical protein
compare
OLJFJH
_06380
-0.7
-3.0
uroporphyrinogen-III C-methyltransferase
compare
Specific Phenotypes
For 3 genes in this experiment