Experiment set5IT091 for Pseudomonas simiae WCS417

Compare to:

Ammonium chloride nitrogen source

200 most important genes:

  gene name fitness t score description  
PS417_18600 -7.5 -4.9 isopropylmalate isomerase compare
PS417_01575 -7.1 -6.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_28220 -7.0 -4.6 LysR family transcriptional regulator compare
PS417_25720 -7.0 -8.3 anthranilate synthase component II compare
PS417_23545 -6.9 -4.7 gamma-glutamyl kinase compare
PS417_26740 -6.6 -12.7 homoserine acetyltransferase compare
PS417_27040 -6.6 -3.7 3-phosphoglycerate dehydrogenase compare
PS417_23805 -6.5 -6.3 acetolactate synthase 3 regulatory subunit compare
PS417_01855 -6.3 -5.5 phosphoribosyl-AMP cyclohydrolase compare
PS417_18560 -6.0 -8.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_18585 -5.9 -7.0 3-isopropylmalate dehydrogenase compare
PS417_23800 -5.8 -12.5 ketol-acid reductoisomerase compare
PS417_02510 -5.7 -6.5 ATP phosphoribosyltransferase regulatory subunit compare
PS417_27835 -5.6 -8.2 endoribonuclease compare
PS417_04415 -5.6 -10.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_00185 -5.5 -6.5 tryptophan synthase subunit beta compare
PS417_25725 -5.5 -15.5 anthranilate synthase component I compare
PS417_24745 -5.4 -5.2 gamma-glutamyl phosphate reductase compare
PS417_16465 -5.3 -12.4 sirohydrochlorin ferrochelatase compare
PS417_22690 -5.2 -6.2 phosphogluconate dehydratase compare
PS417_06375 -5.1 -2.0 deoxycytidine triphosphate deaminase compare
PS417_26745 -5.0 -6.0 methionine biosynthesis protein MetW compare
PS417_27795 -4.9 -1.9 orotate phosphoribosyltransferase compare
PS417_23810 -4.9 -12.5 acetolactate synthase 3 catalytic subunit compare
PS417_01850 -4.9 -10.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_26995 -4.8 -13.2 phosphoserine phosphatase compare
PS417_02005 -4.8 -13.6 glutamate synthase compare
PS417_20125 -4.8 -5.7 phosphoribosylglycinamide formyltransferase compare
PS417_18530 -4.6 -5.2 O-succinylhomoserine sulfhydrylase compare
PS417_01565 -4.6 -3.8 imidazole glycerol phosphate synthase compare
PS417_18595 -4.6 -3.3 3-isopropylmalate dehydratase compare
PS417_12855 -4.5 -7.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_04420 -4.3 -11.9 histidinol dehydrogenase compare
PS417_23995 -4.3 -1.6 preprotein translocase subunit SecG compare
PS417_12290 -4.2 -9.0 sulfite reductase compare
PS417_25710 -4.1 -2.2 indole-3-glycerol-phosphate synthase compare
PS417_01605 -4.0 -3.8 phosphoglycerate mutase compare
PS417_25715 -3.9 -5.3 anthranilate phosphoribosyltransferase compare
PS417_08125 -3.8 -2.5 prephenate dehydratase compare
PS417_00180 -3.8 -4.4 tryptophan synthase subunit alpha compare
PS417_23110 -3.7 -6.8 2-isopropylmalate synthase compare
PS417_26890 -3.7 -6.8 dihydroxy-acid dehydratase compare
PS417_05595 -3.7 -6.5 ornithine carbamoyltransferase compare
PS417_27195 -3.7 -1.8 N-acetylglutamate synthase compare
PS417_01580 -3.6 -1.7 imidazole glycerol phosphate synthase compare
PS417_02000 -3.6 -17.2 glutamate synthase compare
PS417_02415 -3.6 -6.5 phosphoserine phosphatase compare
PS417_18690 -3.3 -5.5 aromatic amino acid aminotransferase compare
PS417_25985 -3.1 -3.5 dethiobiotin synthetase compare
PS417_26000 -3.1 -12.7 8-amino-7-oxononanoate synthase compare
PS417_20160 -2.9 -5.6 cysteine synthase compare
PS417_08220 -2.9 -1.9 epimerase compare
PS417_20985 -2.9 -4.4 porin compare
PS417_26005 -2.9 -9.6 biotin synthase compare
PS417_26540 -2.9 -13.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase conserved
PS417_26695 -2.6 -1.9 uracil phosphoribosyltransferase compare
PS417_22620 -2.5 -6.6 pyruvate kinase compare
PS417_23770 -2.5 -3.7 exodeoxyribonuclease V subunit alpha compare
PS417_08230 -2.4 -3.2 lipopolysaccharide biosynthesis protein RfbH compare
PS417_08245 -2.4 -1.8 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_02555 -2.4 -16.7 exoribonuclease R compare
PS417_21705 -2.3 -5.7 arginine N-succinyltransferase compare
PS417_03310 -2.2 -8.8 carbonate dehydratase compare
PS417_01560 -2.2 -2.8 imidazoleglycerol-phosphate dehydratase compare
PS417_26730 -2.2 -1.5 pyrroline-5-carboxylate reductase compare
PS417_21655 -2.2 -2.7 aspartate kinase compare
PS417_23900 -2.1 -10.2 poly(A) polymerase compare
PS417_06645 -2.1 -9.8 RNA polymerase-associated protein RapA compare
PS417_24835 -2.1 -5.0 hypothetical protein compare
PS417_25990 -2.1 -8.3 malonyl-CoA O-methyltransferase compare
PS417_27435 -2.1 -7.3 polyphosphate kinase compare
PS417_12555 -2.1 -7.5 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) compare
PS417_21125 -2.0 -6.2 phosphoadenosine phosphosulfate reductase compare
PS417_01570 -2.0 -1.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_08195 -1.9 -8.2 hypothetical protein compare
PS417_08200 -1.9 -4.4 hypothetical protein compare
PS417_21980 -1.9 -10.6 permease DsdX compare
PS417_06680 -1.8 -10.4 nuclease PIN compare
PS417_24155 -1.8 -3.1 ATP-binding protein compare
PS417_20610 -1.7 -1.9 hypothetical protein compare
PS417_20665 -1.7 -6.3 hypothetical protein compare
PS417_03925 -1.7 -6.7 nicotinate-nucleotide pyrophosphorylase compare
PS417_08225 -1.7 -6.0 acetolactate synthase compare
PS417_22385 -1.6 -9.3 quinolinate synthase A compare
PS417_08580 -1.6 -7.4 histidine kinase compare
PS417_21430 -1.6 -2.9 3-oxoacyl-ACP synthase compare
PS417_07170 -1.6 -2.1 hypothetical protein compare
PS417_22520 -1.6 -3.1 histidine kinase compare
PS417_22695 -1.5 -7.3 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_26990 -1.5 -2.3 RNA pyrophosphohydrolase compare
PS417_05455 -1.5 -7.2 XRE family transcriptional regulator compare
PS417_07165 -1.5 -4.6 dihydrodipicolinate synthase compare
PS417_27800 -1.4 -6.2 exodeoxyribonuclease III compare
PS417_08205 -1.4 -4.6 acetyltransferase compare
PS417_08155 -1.3 -2.4 integration host factor subunit beta compare
PS417_13800 -1.3 -3.3 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_21630 -1.3 -3.9 magnesium transporter compare
PS417_18590 -1.3 -1.5 SAM-dependent methyltransferase compare
PS417_06200 -1.3 -4.8 protein-PII uridylyltransferase compare
PS417_21700 -1.2 -4.2 arginine N-succinyltransferase compare
PS417_07115 -1.2 -8.5 L-aspartate oxidase compare
PS417_27035 -1.2 -4.1 FAD-linked oxidase compare
PS417_08130 -1.2 -2.1 aspartate aminotransferase compare
PS417_21035 -1.1 -5.8 multidrug transporter compare
PS417_15780 -1.1 -3.2 membrane protein compare
PS417_23950 -1.1 -2.2 polynucleotide phosphorylase/polyadenylase compare
PS417_07875 -1.1 -1.3 hypothetical protein compare
PS417_27010 -1.0 -6.5 threonine dehydratase compare
PS417_00175 -1.0 -1.4 CigR compare
PS417_08990 -1.0 -2.8 ABC transporter substrate-binding protein compare
PS417_05850 -1.0 -2.6 LysR family transcriptional regulator compare
PS417_21690 -1.0 -5.3 N-succinylarginine dihydrolase compare
PS417_14515 -1.0 -2.1 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_08135 -1.0 -5.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_05570 -1.0 -4.5 DeoR faimly transcriptional regulator compare
PS417_04410 -0.9 -1.1 hypothetical protein compare
PS417_26985 -0.9 -3.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_05165 -0.9 -1.5 cytosol aminopeptidase compare
PS417_22060 -0.9 -1.6 hypothetical protein compare
PS417_01710 -0.9 -4.0 histidine utilization repressor compare
PS417_16735 -0.9 -3.4 aldehyde dehydrogenase compare
PS417_21750 -0.9 -7.5 acetyl-CoA synthetase compare
PS417_08365 -0.9 -1.1 hypothetical protein compare
PS417_28070 -0.9 -4.2 phosphate ABC transporter ATP-binding protein compare
PS417_05885 -0.9 -5.3 potassium transporter Kup compare
PS417_28080 -0.9 -5.7 phosphate ABC transporter permease compare
PS417_16490 -0.8 -1.8 cell division protein FtsK compare
PS417_24935 -0.8 -1.1 hypothetical protein compare
PS417_15935 -0.8 -2.6 Rrf2 family transcriptional regulator compare
PS417_18540 -0.8 -1.9 colicin V production CvpA compare
PS417_17780 -0.8 -1.3 Ais protein compare
PS417_17240 -0.8 -2.5 trigger factor compare
PS417_21360 -0.8 -1.2 termination factor Rho compare
PS417_27005 -0.8 -1.1 membrane protein compare
PS417_04270 -0.8 -5.5 ribonuclease G compare
PS417_05905 -0.8 -1.3 hypothetical protein compare
PS417_28225 -0.8 -1.5 hypothetical protein compare
PS417_15465 -0.8 -2.1 carboxynorspermidine decarboxylase compare
PS417_21480 -0.8 -1.5 23S rRNA pseudouridylate synthase compare
PS417_18425 -0.8 -1.0 sporulation protein compare
PS417_10995 -0.7 -2.2 GntR family transcriptional regulator compare
PS417_22570 -0.7 -0.9 H-NS histone compare
PS417_23650 -0.7 -2.9 Kynureninase (EC 3.7.1.3) (from data) compare
PS417_28230 -0.7 -1.2 transcriptional regulator compare
PS417_22565 -0.7 -1.1 formyltetrahydrofolate deformylase compare
PS417_00995 -0.7 -1.5 alpha/beta hydrolase compare
PS417_00075 -0.7 -1.7 hypothetical protein compare
PS417_02915 -0.7 -3.3 precorrin-3B C17-methyltransferase compare
PS417_01950 -0.7 -3.4 malate dehydrogenase compare
PS417_02150 -0.7 -4.4 potassium/proton antiporter compare
PS417_20265 -0.7 -2.3 transcriptional regulator compare
PS417_02025 -0.7 -3.4 hypothetical protein compare
PS417_15470 -0.7 -2.8 saccharopine dehydrogenase compare
PS417_10025 -0.7 -1.4 bacteriophage lambda NinG family protein compare
PS417_13575 -0.6 -2.6 succinylglutamate desuccinylase compare
PS417_20620 -0.6 -3.2 glycosyl transferase family 2 compare
PS417_23205 -0.6 -2.0 transcriptional regulator compare
PS417_24785 -0.6 -0.8 nucleoside-diphosphate sugar epimerase compare
PS417_23775 -0.6 -1.4 exodeoxyribonuclease V subunit beta compare
PS417_03430 -0.6 -2.0 methyltransferase type 11 compare
PS417_20635 -0.6 -0.7 ABC transporter ATP-binding protein compare
PS417_18310 -0.6 -1.3 hypothetical protein compare
PS417_04705 -0.6 -1.6 hypothetical protein compare
PS417_18965 -0.6 -2.0 dienelactone hydrolase compare
PS417_00295 -0.6 -3.1 hypothetical protein compare
PS417_18205 -0.6 -1.7 aldehyde dehydrogenase compare
PS417_11615 -0.6 -0.9 urea ABC transporter ATP-binding protein compare
PS417_20660 -0.6 -3.4 hypothetical protein compare
PS417_05840 -0.6 -2.4 LuxR family transcriptional regulator compare
PS417_19075 -0.6 -2.7 ABC transporter ATP-binding protein compare
PS417_14305 -0.6 -2.6 hydroxyproline-2-epimerase compare
PS417_24585 -0.6 -4.2 AMP nucleosidase compare
PS417_22445 -0.6 -1.8 ATP-dependent DNA helicase RuvB compare
PS417_00455 -0.6 -1.2 hypothetical protein compare
PS417_15085 -0.6 -2.5 ATPase AAA compare
PS417_13145 -0.6 -1.3 50S ribosomal protein L21 compare
PS417_01825 -0.6 -1.5 chemotaxis protein compare
PS417_22140 -0.6 -3.7 glucose/xylose ABC transporter, permease component 2 (from data) compare
PS417_11430 -0.6 -3.6 EamA compare
PS417_24500 -0.6 -2.8 DEAD/DEAH box helicase compare
PS417_09435 -0.6 -2.7 glyoxalase compare
PS417_23380 -0.6 -1.1 cytochrome o ubiquinol oxidase subunit III compare
PS417_26420 -0.6 -1.2 hypothetical protein compare
PS417_02740 -0.6 -1.6 LysR family transcriptional regulator compare
PS417_06540 -0.6 -1.2 membrane protein compare
PS417_13490 -0.6 -1.2 hypothetical protein compare
PS417_05160 -0.6 -0.8 DNA polymerase III subunit chi compare
PS417_17590 -0.6 -0.9 ABC transporter substrate-binding protein compare
PS417_19520 -0.6 -2.0 transcriptional regulator compare
PS417_07195 -0.6 -2.2 hypothetical protein compare
PS417_23530 -0.5 -2.6 1,2-oxophytodienoate reductase compare
PS417_23375 -0.5 -0.8 cytochrome C oxidase compare
PS417_05535 -0.5 -1.1 Fis family transcriptional regulator compare
PS417_05695 -0.5 -2.3 transcriptional regulator compare
PS417_05040 -0.5 -2.3 amino acid dehydrogenase compare
PS417_10320 -0.5 -1.8 hypothetical protein compare
PS417_06530 -0.5 -2.2 membrane protein compare
PS417_15725 -0.5 -1.4 nitrate/nitrite transporter NarK compare
PS417_03705 -0.5 -1.1 2-alkenal reductase compare
PS417_25915 -0.5 -1.3 carbon-nitrogen hydrolase compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Ammonium chloride in Pseudomonas simiae WCS417

For nitrogen source Ammonium chloride across organisms