Experiment set5IT088 for Pseudomonas simiae WCS417

Compare to:

Inosine nitrogen source

200 most important genes:

  gene name fitness t score description  
PS417_18595 -7.4 -5.1 3-isopropylmalate dehydratase compare
PS417_18600 -7.1 -4.7 isopropylmalate isomerase compare
PS417_01855 -7.1 -4.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_02005 -6.5 -10.9 glutamate synthase compare
PS417_23545 -6.5 -4.5 gamma-glutamyl kinase compare
PS417_18585 -6.4 -4.4 3-isopropylmalate dehydrogenase compare
PS417_01565 -6.4 -5.2 imidazole glycerol phosphate synthase compare
PS417_23800 -6.3 -10.6 ketol-acid reductoisomerase compare
PS417_02695 -6.3 -2.5 protein hupE compare
PS417_01635 -6.1 -5.7 nitrogen regulation protein NR(I) compare
PS417_01575 -6.1 -5.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_25720 -5.9 -9.7 anthranilate synthase component II compare
PS417_01640 -5.7 -5.6 histidine kinase compare
PS417_18560 -5.7 -10.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_06200 -5.6 -6.7 protein-PII uridylyltransferase compare
PS417_08125 -5.6 -2.2 prephenate dehydratase compare
PS417_00185 -5.6 -5.4 tryptophan synthase subunit beta compare
PS417_25725 -5.5 -14.4 anthranilate synthase component I compare
PS417_01710 -5.5 -4.8 histidine utilization repressor compare
PS417_22690 -5.5 -3.8 phosphogluconate dehydratase compare
PS417_01850 -5.2 -9.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_02000 -5.0 -12.6 glutamate synthase compare
PS417_26745 -5.0 -6.9 methionine biosynthesis protein MetW compare
PS417_23810 -5.0 -11.1 acetolactate synthase 3 catalytic subunit compare
PS417_23110 -4.9 -12.2 2-isopropylmalate synthase compare
PS417_04415 -4.9 -8.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_00180 -4.9 -3.4 tryptophan synthase subunit alpha compare
PS417_06375 -4.9 -1.9 deoxycytidine triphosphate deaminase compare
PS417_24745 -4.9 -5.8 gamma-glutamyl phosphate reductase compare
PS417_02510 -4.8 -7.9 ATP phosphoribosyltransferase regulatory subunit compare
PS417_26740 -4.7 -11.5 homoserine acetyltransferase compare
PS417_24585 -4.7 -14.2 AMP nucleosidase compare
PS417_23805 -4.7 -5.7 acetolactate synthase 3 regulatory subunit compare
PS417_04420 -4.7 -10.1 histidinol dehydrogenase compare
PS417_27795 -4.6 -1.8 orotate phosphoribosyltransferase compare
PS417_02710 -4.6 -7.7 Urease maturation and nickel insertion protein UreE (from data) conserved
PS417_05595 -4.6 -9.1 ornithine carbamoyltransferase compare
PS417_02415 -4.3 -8.3 phosphoserine phosphatase compare
PS417_27615 -4.2 -11.1 ammonia channel protein compare
PS417_05530 -4.2 -5.8 membrane protein compare
PS417_02785 -4.2 -15.8 Urease (EC 3.5.1.5) (from data) conserved
PS417_26995 -4.2 -11.2 phosphoserine phosphatase compare
PS417_03925 -4.2 -11.9 nicotinate-nucleotide pyrophosphorylase compare
PS417_28220 -4.1 -4.0 LysR family transcriptional regulator compare
PS417_18530 -4.1 -5.8 O-succinylhomoserine sulfhydrylase compare
PS417_23995 -4.0 -1.6 preprotein translocase subunit SecG compare
PS417_27835 -4.0 -8.3 endoribonuclease compare
PS417_26890 -3.9 -6.4 dihydroxy-acid dehydratase compare
PS417_25715 -3.9 -6.0 anthranilate phosphoribosyltransferase compare
PS417_25710 -3.9 -2.1 indole-3-glycerol-phosphate synthase compare
PS417_03740 -3.7 -5.2 peptidylprolyl isomerase conserved
PS417_22385 -3.7 -13.5 quinolinate synthase A compare
PS417_01605 -3.7 -3.4 phosphoglycerate mutase compare
PS417_19415 -3.4 -3.4 allantoinase compare
PS417_27010 -3.4 -10.7 threonine dehydratase compare
PS417_01580 -3.4 -1.6 imidazole glycerol phosphate synthase compare
PS417_26985 -3.3 -3.0 phosphoenolpyruvate-protein phosphotransferase compare
PS417_27040 -3.3 -2.0 3-phosphoglycerate dehydrogenase compare
PS417_12855 -3.3 -6.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_12290 -3.2 -6.7 sulfite reductase compare
PS417_01560 -3.2 -4.0 imidazoleglycerol-phosphate dehydratase compare
PS417_27800 -3.1 -8.2 exodeoxyribonuclease III compare
PS417_21035 -3.0 -12.6 multidrug transporter compare
PS417_19420 -3.0 -7.8 OHCU decarboxylase conserved
PS417_07115 -3.0 -15.8 L-aspartate oxidase compare
PS417_26730 -2.8 -1.5 pyrroline-5-carboxylate reductase compare
PS417_19425 -2.7 -1.5 allantoicase compare
PS417_23770 -2.7 -4.0 exodeoxyribonuclease V subunit alpha compare
PS417_12555 -2.6 -12.0 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) compare
PS417_02700 -2.5 -3.9 urease accessory protein UreG compare
PS417_03560 -2.5 -3.1 GTP-binding protein compare
PS417_02705 -2.5 -3.8 urease accessory protein UreF compare
PS417_02555 -2.5 -12.7 exoribonuclease R compare
PS417_16465 -2.4 -5.2 sirohydrochlorin ferrochelatase compare
PS417_01570 -2.4 -1.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_16005 -2.4 -2.3 ATPase compare
PS417_20160 -2.3 -3.3 cysteine synthase compare
PS417_27195 -2.3 -1.2 N-acetylglutamate synthase compare
PS417_02805 -2.2 -1.3 urease subunit gamma compare
PS417_03260 -2.2 -3.3 5S ribosomal RNA compare
PS417_02485 -2.2 -6.7 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_27435 -2.1 -8.7 polyphosphate kinase compare
PS417_22570 -2.1 -1.6 H-NS histone compare
PS417_24155 -2.1 -3.1 ATP-binding protein compare
PS417_16510 -2.1 -4.0 Clp protease ClpX compare
PS417_18690 -2.0 -3.4 aromatic amino acid aminotransferase compare
PS417_21705 -2.0 -5.3 arginine N-succinyltransferase compare
PS417_12310 -1.9 -9.3 methionine synthase compare
PS417_21125 -1.9 -7.3 phosphoadenosine phosphosulfate reductase compare
PS417_26695 -1.9 -1.7 uracil phosphoribosyltransferase compare
PS417_22840 -1.8 -3.1 tRNA-Met compare
PS417_19605 -1.8 -2.0 hypothetical protein compare
PS417_22620 -1.8 -3.9 pyruvate kinase compare
PS417_08220 -1.7 -1.4 epimerase compare
PS417_19430 -1.7 -4.2 ureidoglycolate hydrolase compare
PS417_22565 -1.7 -1.9 formyltetrahydrofolate deformylase compare
PS417_06895 -1.7 -4.3 DNA-binding protein compare
PS417_27035 -1.6 -3.4 FAD-linked oxidase compare
PS417_05140 -1.5 -2.5 dipicolinate synthase compare
PS417_02795 -1.5 -3.2 acetyltransferase compare
PS417_27705 -1.5 -1.9 amino acid dehydrogenase compare
PS417_28230 -1.5 -2.2 transcriptional regulator compare
PS417_26040 -1.5 -3.0 malate synthase compare
PS417_22520 -1.4 -3.0 histidine kinase compare
PS417_21655 -1.4 -2.0 aspartate kinase compare
PS417_08135 -1.4 -5.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_08580 -1.4 -5.1 histidine kinase compare
PS417_20665 -1.3 -6.2 hypothetical protein compare
PS417_09470 -1.3 -1.5 hypothetical protein compare
PS417_07565 -1.3 -2.4 hypothetical protein compare
PS417_08155 -1.3 -2.8 integration host factor subunit beta compare
PS417_23390 -1.2 -5.5 ubiquinol oxidase subunit II compare
PS417_22450 -1.2 -1.7 ATP-dependent DNA helicase RuvA compare
PS417_08200 -1.2 -2.7 hypothetical protein compare
PS417_16555 -1.2 -2.5 cupin compare
PS417_19435 -1.2 -5.1 urate hydroxylase (1.7.3.3) (from data) conserved
PS417_28070 -1.2 -6.2 phosphate ABC transporter ATP-binding protein compare
PS417_26005 -1.2 -7.0 biotin synthase compare
PS417_21690 -1.1 -3.6 N-succinylarginine dihydrolase compare
PS417_18445 -1.1 -3.4 glycerol-3-phosphatase compare
PS417_06680 -1.1 -6.8 nuclease PIN compare
PS417_00845 -1.1 -1.7 transcriptional regulator compare
PS417_00285 -1.1 -3.9 carbonate dehydratase compare
PS417_20610 -1.1 -1.2 hypothetical protein compare
PS417_02815 -1.1 -2.3 urea ABC transporter ATP-binding protein compare
PS417_08430 -1.1 -4.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
PS417_21030 -1.1 -6.1 GntR family transcriptional regulator compare
PS417_00650 -1.1 -1.0 LysR family transcriptional regulator compare
PS417_08670 -1.1 -3.6 molybdopterin biosynthesis protein B compare
PS417_09715 -1.1 -2.3 hypothetical protein compare
PS417_16515 -1.1 -3.0 Clp protease ClpS compare
PS417_02895 -1.0 -1.9 precorrin-6Y C5,15-methyltransferase compare
PS417_08675 -1.0 -4.3 molybdenum cofactor biosynthesis protein MoaA compare
PS417_08195 -1.0 -6.4 hypothetical protein compare
PS417_07885 -1.0 -2.7 hypothetical protein compare
PS417_02150 -1.0 -4.8 potassium/proton antiporter compare
PS417_11180 -1.0 -3.0 TetR family transcriptional regulator compare
PS417_18590 -1.0 -1.3 SAM-dependent methyltransferase compare
PS417_02820 -1.0 -2.0 urea ABC transporter ATP-binding protein compare
PS417_04860 -1.0 -5.2 ATPase compare
PS417_06685 -1.0 -1.0 beta-ketoadipyl CoA thiolase compare
PS417_15465 -1.0 -2.2 carboxynorspermidine decarboxylase compare
PS417_23385 -1.0 -5.1 cytochrome o ubiquinol oxidase subunit I compare
PS417_19190 -1.0 -3.6 BolA family transcriptional regulator compare
PS417_20895 -1.0 -7.4 molybdenum cofactor sulfurylase compare
PS417_21395 -1.0 -5.5 radical SAM protein compare
PS417_18760 -1.0 -3.3 hypothetical protein compare
PS417_20140 -1.0 -2.7 nucleoprotein/polynucleotide-associated enzyme compare
PS417_20985 -1.0 -3.0 porin compare
PS417_23375 -1.0 -1.8 cytochrome C oxidase compare
PS417_15935 -1.0 -1.7 Rrf2 family transcriptional regulator compare
PS417_13445 -1.0 -1.5 D-aminopeptidase compare
PS417_05165 -1.0 -3.0 cytosol aminopeptidase compare
PS417_05540 -1.0 -2.4 histidine kinase compare
PS417_24675 -0.9 -1.4 lipoyl synthase compare
PS417_20635 -0.9 -0.9 ABC transporter ATP-binding protein compare
PS417_13165 -0.9 -1.1 peroxidase compare
PS417_20885 -0.9 -3.9 Xanthine dehydrogenase (EC 1.17.1.4) (from data) compare
PS417_20890 -0.9 -7.1 Xanthine dehydrogenase (EC 1.17.1.4) (from data) compare
PS417_07245 -0.9 -2.4 2-deoxy-D-ribonate 3-dehydrogenase (from data) compare
PS417_00295 -0.9 -3.3 hypothetical protein compare
PS417_27305 -0.9 -4.2 5-formyltetrahydrofolate cyclo-ligase compare
PS417_17780 -0.9 -1.2 Ais protein compare
PS417_28080 -0.9 -6.4 phosphate ABC transporter permease compare
PS417_22640 -0.9 -2.7 cytochrome C biogenesis protein CcmE compare
PS417_18425 -0.9 -1.0 sporulation protein compare
PS417_21630 -0.9 -2.7 magnesium transporter compare
PS417_04865 -0.9 -1.3 molybdenum cofactor biosynthesis protein MoaC compare
PS417_24570 -0.9 -3.0 AsnC family transcriptional regulator compare
PS417_23380 -0.9 -2.1 cytochrome o ubiquinol oxidase subunit III compare
PS417_08225 -0.9 -3.2 acetolactate synthase compare
PS417_03030 -0.9 -3.2 pyrophosphatase compare
PS417_08110 -0.9 -3.3 methylthioribose-1-phosphate isomerase compare
PS417_14725 -0.9 -4.0 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
PS417_25390 -0.9 -4.0 MFS transporter compare
PS417_08990 -0.9 -2.4 ABC transporter substrate-binding protein compare
PS417_24835 -0.8 -2.8 hypothetical protein compare
PS417_04875 -0.8 -1.2 molybdenum cofactor biosynthesis protein MoaE compare
PS417_13730 -0.8 -2.7 hypothetical protein compare
PS417_13510 -0.8 -1.0 polyketide cyclase compare
PS417_04530 -0.8 -1.4 glycerate dehydrogenase compare
PS417_08230 -0.8 -1.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_12845 -0.8 -2.3 NAD(P)H dehydrogenase compare
PS417_08130 -0.8 -1.4 aspartate aminotransferase compare
PS417_09420 -0.8 -1.5 LysR family transcriptional regulator compare
PS417_08945 -0.8 -4.3 heat shock protein 90 compare
PS417_00755 -0.8 -0.7 biofilm PGA synthesis protein PgaD compare
PS417_24380 -0.8 -4.4 guanine permease compare
PS417_24310 -0.8 -2.2 ankyrin compare
PS417_08025 -0.8 -0.8 acetylornithine aminotransferase compare
PS417_17565 -0.8 -2.5 branched-chain amino acid aminotransferase compare
PS417_13305 -0.8 -1.2 hypothetical protein compare
PS417_28085 -0.8 -5.3 phosphate-binding protein compare
PS417_22445 -0.8 -2.4 ATP-dependent DNA helicase RuvB compare
PS417_11520 -0.8 -2.4 Sorbitol dehydrogenase (EC 1.1.1.14) (from data) compare
PS417_20645 -0.8 -4.6 membrane protein compare
PS417_07165 -0.8 -2.7 dihydrodipicolinate synthase compare
PS417_27155 -0.8 -1.0 aliphatic sulfonates transport ATP-binding subunit compare
PS417_06195 -0.8 -4.5 succinyldiaminopimelate aminotransferase compare
PS417_14730 -0.8 -4.8 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare


Specific Phenotypes

For 11 genes in this experiment

For nitrogen source Inosine in Pseudomonas simiae WCS417

For nitrogen source Inosine across organisms