Experiment set5IT086 for Pseudomonas simiae WCS417

Compare to:

Adenine hydrochloride hydrate nitrogen source

200 most important genes:

  gene name fitness t score description  
PS417_01855 -7.3 -4.1 phosphoribosyl-AMP cyclohydrolase compare
PS417_01575 -6.9 -5.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_28220 -6.9 -4.2 LysR family transcriptional regulator compare
PS417_23545 -6.6 -4.4 gamma-glutamyl kinase compare
PS417_27040 -6.5 -3.4 3-phosphoglycerate dehydrogenase compare
PS417_02005 -6.5 -11.7 glutamate synthase compare
PS417_18600 -5.9 -4.6 isopropylmalate isomerase compare
PS417_00185 -5.9 -5.7 tryptophan synthase subunit beta compare
PS417_04415 -5.8 -10.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_25720 -5.7 -10.6 anthranilate synthase component II compare
PS417_22690 -5.6 -3.9 phosphogluconate dehydratase compare
PS417_01850 -5.6 -9.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_24745 -5.5 -3.6 gamma-glutamyl phosphate reductase compare
PS417_02000 -5.4 -13.0 glutamate synthase compare
PS417_02510 -5.4 -3.9 ATP phosphoribosyltransferase regulatory subunit compare
PS417_27835 -5.3 -9.9 endoribonuclease compare
PS417_18560 -5.3 -9.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_18585 -5.3 -7.2 3-isopropylmalate dehydrogenase compare
PS417_23800 -5.3 -12.2 ketol-acid reductoisomerase compare
PS417_12855 -5.2 -6.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_26745 -5.2 -6.3 methionine biosynthesis protein MetW compare
PS417_01565 -5.1 -3.5 imidazole glycerol phosphate synthase compare
PS417_25725 -5.1 -15.3 anthranilate synthase component I compare
PS417_26740 -4.9 -11.7 homoserine acetyltransferase compare
PS417_18530 -4.9 -5.7 O-succinylhomoserine sulfhydrylase compare
PS417_27795 -4.8 -1.7 orotate phosphoribosyltransferase compare
PS417_16465 -4.8 -11.6 sirohydrochlorin ferrochelatase compare
PS417_04420 -4.8 -9.6 histidinol dehydrogenase compare
PS417_18595 -4.7 -3.5 3-isopropylmalate dehydratase compare
PS417_08035 -4.7 -12.0 adenine transporter (MFS superfamily) (from data) conserved
PS417_06685 -4.7 -1.7 beta-ketoadipyl CoA thiolase compare
PS417_23810 -4.7 -11.1 acetolactate synthase 3 catalytic subunit compare
PS417_02555 -4.6 -22.2 exoribonuclease R compare
PS417_12555 -4.5 -13.9 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) compare
PS417_12290 -4.5 -7.7 sulfite reductase compare
PS417_23995 -4.1 -1.4 preprotein translocase subunit SecG compare
PS417_00180 -4.1 -4.8 tryptophan synthase subunit alpha compare
PS417_22620 -4.0 -8.2 pyruvate kinase compare
PS417_25710 -4.0 -1.9 indole-3-glycerol-phosphate synthase compare
PS417_11930 -3.9 -5.3 hypothetical protein compare
PS417_17565 -3.9 -4.9 branched-chain amino acid aminotransferase compare
PS417_01605 -3.9 -3.2 phosphoglycerate mutase compare
PS417_08030 -3.8 -8.9 transcriptional regulator conserved
PS417_26995 -3.8 -11.5 phosphoserine phosphatase compare
PS417_27435 -3.7 -8.7 polyphosphate kinase compare
PS417_02280 -3.7 -2.2 GlcNAc-PI de-N-acetylase compare
PS417_08125 -3.7 -2.2 prephenate dehydratase compare
PS417_27800 -3.7 -7.1 exodeoxyribonuclease III compare
PS417_06375 -3.7 -1.8 deoxycytidine triphosphate deaminase compare
PS417_05595 -3.6 -6.8 ornithine carbamoyltransferase compare
PS417_27195 -3.6 -1.7 N-acetylglutamate synthase compare
PS417_12310 -3.5 -10.9 methionine synthase compare
PS417_01580 -3.5 -1.5 imidazole glycerol phosphate synthase compare
PS417_26510 -3.5 -11.1 5,10-methylenetetrahydrofolate reductase compare
PS417_22570 -3.5 -1.7 H-NS histone compare
PS417_23950 -3.4 -4.6 polynucleotide phosphorylase/polyadenylase compare
PS417_23805 -3.4 -5.6 acetolactate synthase 3 regulatory subunit compare
PS417_25715 -3.4 -4.3 anthranilate phosphoribosyltransferase compare
PS417_22520 -3.2 -4.9 histidine kinase compare
PS417_27305 -3.2 -7.1 5-formyltetrahydrofolate cyclo-ligase compare
PS417_26890 -3.1 -4.8 dihydroxy-acid dehydratase compare
PS417_02415 -3.0 -4.3 phosphoserine phosphatase compare
PS417_26730 -2.9 -1.5 pyrroline-5-carboxylate reductase compare
PS417_25985 -2.9 -3.0 dethiobiotin synthetase compare
PS417_23900 -2.9 -11.3 poly(A) polymerase compare
PS417_27010 -2.7 -7.9 threonine dehydratase compare
PS417_21120 -2.7 -5.8 phosphoserine phosphatase compare
PS417_23110 -2.7 -4.8 2-isopropylmalate synthase compare
PS417_04650 -2.7 -2.1 D-alanine--D-alanine ligase compare
PS417_23775 -2.6 -3.7 exodeoxyribonuclease V subunit beta compare
PS417_00510 -2.6 -1.7 membrane protein compare
PS417_26005 -2.6 -9.6 biotin synthase compare
PS417_23770 -2.6 -4.1 exodeoxyribonuclease V subunit alpha compare
PS417_23915 -2.4 -8.8 pantoate--beta-alanine ligase compare
PS417_21430 -2.4 -3.3 3-oxoacyl-ACP synthase compare
PS417_20985 -2.4 -3.9 porin compare
PS417_08580 -2.4 -7.7 histidine kinase compare
PS417_26540 -2.3 -11.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PS417_26000 -2.3 -10.6 8-amino-7-oxononanoate synthase compare
PS417_02425 -2.2 -7.0 thiosulfate sulfurtransferase compare
PS417_21125 -2.2 -9.7 phosphoadenosine phosphosulfate reductase compare
PS417_27135 -2.2 -1.5 glutamine synthetase compare
PS417_25990 -2.1 -8.0 malonyl-CoA O-methyltransferase compare
PS417_17945 -2.0 -1.5 hypothetical protein compare
PS417_20160 -2.0 -2.1 cysteine synthase compare
PS417_06200 -2.0 -4.6 protein-PII uridylyltransferase compare
PS417_23360 -1.9 -1.4 hypothetical protein compare
PS417_19350 -1.9 -5.4 GTP cyclohydrolase compare
PS417_24155 -1.8 -2.3 ATP-binding protein compare
PS417_03205 -1.8 -5.2 adenine deaminase conserved
PS417_01635 -1.7 -6.2 nitrogen regulation protein NR(I) compare
PS417_03310 -1.6 -6.0 carbonate dehydratase compare
PS417_21850 -1.6 -2.0 LysR family transcriptional regulator compare
PS417_01995 -1.6 -1.5 hypothetical protein compare
PS417_06060 -1.3 -8.2 phosphoenolpyruvate carboxylase compare
PS417_00830 -1.3 -4.3 hypothetical protein compare
PS417_04590 -1.3 -6.0 methyltransferase compare
PS417_27035 -1.3 -6.0 FAD-linked oxidase compare
PS417_09210 -1.3 -1.9 TetR family transcriptional regulator compare
PS417_05885 -1.3 -5.5 potassium transporter Kup compare
PS417_28070 -1.2 -5.4 phosphate ABC transporter ATP-binding protein compare
PS417_01570 -1.2 -1.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_19565 -1.2 -5.1 TetR family transcriptional regulator compare
PS417_25220 -1.2 -4.8 iron-hydroxamate ABC transporter substrate-binding protein compare
PS417_28080 -1.1 -7.6 phosphate ABC transporter permease compare
PS417_01560 -1.1 -1.4 imidazoleglycerol-phosphate dehydratase compare
PS417_21705 -1.1 -4.3 arginine N-succinyltransferase compare
PS417_06700 -1.1 -3.4 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) (from data) compare
PS417_16005 -1.1 -2.9 ATPase compare
PS417_05975 -1.1 -1.0 chemotaxis protein CheW compare
PS417_28075 -1.1 -3.9 phosphate ABC transporter permease compare
PS417_08610 -1.1 -7.6 deoxyguanosinetriphosphate triphosphohydrolase compare
PS417_21750 -1.1 -8.3 acetyl-CoA synthetase compare
PS417_26660 -1.0 -3.6 protein PilI compare
PS417_18455 -1.0 -2.0 hypothetical protein compare
PS417_24460 -1.0 -2.5 hypothetical protein compare
PS417_25645 -1.0 -3.5 peptidase M23 compare
PS417_28085 -1.0 -4.5 phosphate-binding protein compare
PS417_08045 -1.0 -2.4 uracil permease compare
PS417_13165 -1.0 -2.5 peroxidase compare
PS417_05570 -1.0 -3.7 DeoR faimly transcriptional regulator compare
PS417_26420 -1.0 -1.6 hypothetical protein compare
PS417_22695 -1.0 -5.2 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_22450 -1.0 -1.6 ATP-dependent DNA helicase RuvA compare
PS417_26645 -1.0 -1.6 chemotaxis protein compare
PS417_11845 -1.0 -4.6 RpiR family transcriptional regulator compare
PS417_25155 -1.0 -1.4 hypothetical protein compare
PS417_16715 -1.0 -1.8 DoxX family protein compare
PS417_26805 -1.0 -1.0 cell division protein FtsE compare
PS417_18590 -0.9 -1.9 SAM-dependent methyltransferase compare
PS417_08380 -0.9 -3.2 ABC transporter ATP-binding protein compare
PS417_07985 -0.9 -1.0 AbrB family transcriptional regulator compare
PS417_06245 -0.9 -2.3 zinc metallopeptidase RseP compare
PS417_07470 -0.9 -1.4 hypothetical protein compare
PS417_02895 -0.9 -2.1 precorrin-6Y C5,15-methyltransferase compare
PS417_25320 -0.9 -5.1 dTDP-4-dehydrorhamnose reductase compare
PS417_05650 -0.9 -2.7 leucyl-tRNA synthetase compare
PS417_11810 -0.9 -1.2 oxidoreductase compare
PS417_18545 -0.9 -3.2 cell division protein compare
PS417_01915 -0.9 -1.0 ATP-dependent protease ATP-binding subunit HslU compare
PS417_08250 -0.9 -2.2 competence protein ComEA compare
PS417_18070 -0.9 -1.1 general secretion pathway protein GspH compare
PS417_00865 -0.9 -1.8 hypothetical protein compare
PS417_21655 -0.9 -1.3 aspartate kinase compare
PS417_07895 -0.9 -1.5 hypothetical protein compare
PS417_25650 -0.9 -3.1 anhydro-N-acetylmuramic acid kinase compare
PS417_27140 -0.9 -3.4 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) compare
PS417_20170 -0.9 -2.6 hypothetical protein compare
PS417_02150 -0.8 -5.6 potassium/proton antiporter compare
PS417_00295 -0.8 -3.7 hypothetical protein compare
PS417_21930 -0.8 -4.3 membrane protein compare
PS417_22840 -0.8 -2.0 tRNA-Met compare
PS417_26725 -0.8 -2.3 hypothetical protein compare
PS417_00845 -0.8 -1.2 transcriptional regulator compare
PS417_16490 -0.8 -1.8 cell division protein FtsK compare
PS417_06205 -0.8 -5.5 methionine aminopeptidase compare
PS417_11935 -0.8 -3.6 ABC transporter substrate-binding protein compare
PS417_23845 -0.8 -2.3 hemin ABC transporter ATP-binding protein compare
PS417_18355 -0.8 -5.8 DNA-binding protein compare
PS417_15085 -0.8 -3.1 ATPase AAA compare
PS417_00550 -0.8 -0.9 hypothetical protein compare
PS417_22615 -0.8 -3.1 hypothetical protein compare
PS417_05815 -0.8 -3.0 recombinase RecA compare
PS417_04410 -0.8 -0.9 hypothetical protein compare
PS417_02560 -0.8 -1.4 23S rRNA methyltransferase compare
PS417_05840 -0.8 -3.0 LuxR family transcriptional regulator compare
PS417_11530 -0.8 -2.6 amidase compare
PS417_16555 -0.8 -1.3 cupin compare
PS417_04180 -0.8 -3.1 GntR family transcriptional regulator compare
PS417_18690 -0.8 -1.4 aromatic amino acid aminotransferase compare
PS417_16735 -0.8 -2.7 aldehyde dehydrogenase compare
PS417_08220 -0.8 -0.8 epimerase compare
PS417_17840 -0.7 -1.9 betaine-aldehyde dehydrogenase compare
PS417_25270 -0.7 -1.0 NrdR family transcriptional regulator compare
PS417_27870 -0.7 -2.0 ATP-dependent DNA helicase RecG compare
PS417_10305 -0.7 -1.8 hypothetical protein compare
PS417_03705 -0.7 -2.0 2-alkenal reductase compare
PS417_15285 -0.7 -0.9 type VI secretion protein compare
PS417_11945 -0.7 -2.4 hypothetical protein compare
PS417_26655 -0.7 -2.4 chemotaxis protein compare
PS417_21275 -0.7 -5.4 GntR family transcriptional regulator compare
PS417_23025 -0.7 -3.5 murein transglycosylase compare
PS417_28100 -0.7 -2.8 glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) compare
PS417_04985 -0.7 -2.3 ketosteroid isomerase compare
PS417_16195 -0.7 -0.8 AraC family transcriptional regulator compare
PS417_26650 -0.7 -4.8 histidine kinase compare
PS417_15560 -0.7 -2.2 hypothetical protein compare
PS417_05100 -0.7 -1.5 RNA polymerase sigma factor compare
PS417_03740 -0.7 -2.2 peptidylprolyl isomerase compare
PS417_11860 -0.7 -3.1 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) compare
PS417_20635 -0.7 -0.7 ABC transporter ATP-binding protein compare
PS417_16100 -0.7 -2.9 antibiotic biosynthesis monooxygenase compare
PS417_21625 -0.7 -0.8 DNA-binding protein compare
PS417_00870 -0.7 -2.7 hypothetical protein compare
PS417_10015 -0.7 -0.9 hypothetical protein compare
PS417_19935 -0.7 -2.7 hypothetical protein compare
PS417_12325 -0.7 -2.8 precorrin-4 C11-methyltransferase compare
PS417_03685 -0.7 -1.3 FAD-dependent oxidoreductase compare
PS417_13075 -0.7 -1.0 hypothetical protein compare
PS417_27475 -0.7 -1.5 membrane protein compare


Specific Phenotypes

For 15 genes in this experiment

For nitrogen source Adenine hydrochloride hydrate in Pseudomonas simiae WCS417

For nitrogen source Adenine hydrochloride hydrate across organisms