Experiment set5IT086 for Pseudomonas putida KT2440

Compare to:

Vanillin carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_1292 -6.0 -8.2 Cyclic pyranopterin monophosphate synthase accessory protein compare
PP_1379 -5.8 -6.9 3-carboxy-cis,cis-muconate cycloisomerase compare
PP_4656 -5.6 -8.5 protocatechuate 3,4-dioxygenase beta chain compare
PP_1377 -5.5 -8.4 beta-ketoadipyl-CoA thiolase compare
PP_1380 -5.4 -7.4 3-oxoadipate enol-lactonase 2 compare
PP_3736 -5.3 -11.3 vanillate O-demethylase oxygenase subunit compare
PP_3952 -5.2 -11.0 3-oxoadipate CoA-transferase subunit A compare
PP_1375 -5.0 -15.9 transcription regulatory protein (pca regulon) compare
PP_2123 -4.7 -12.5 molybdenum::molybdopterin ligase compare
PP_3737 -4.6 -11.1 vanillate O-demethylase oxidoreductase compare
PP_4655 -4.4 -9.1 protocatechuate 3,4-dioxygenase alpha chain compare
PP_1294 -4.1 -7.6 molybdopterin synthase large subunit compare
PP_3828 -4.1 -11.3 Molybdate-binding periplasmic protein compare
PP_3621 -3.5 -7.7 vanillin dehydrogenase, iorA-like component (from data) compare
PP_3622 -3.3 -15.5 vanillin dehydrogenase, iorB-like component (from data) compare
PP_3830 -3.1 -10.7 Molybdenum import ATP-binding protein ModC compare
PP_1616 -3.0 -12.0 formaldehyde dehydrogenase, glutathione-dependent compare
PP_4597 -2.9 -5.7 Cyclic pyranopterin monophosphate synthase compare
PP_5161 -2.9 -7.3 putative lysophospholipase compare
PP_4231 -2.5 -7.8 putative Xanthine dehydrogenase accessory factor compare
PP_3456 -2.4 -8.9 Multidrug resistance protein MexB compare
PP_3455 -2.3 -6.0 Multidrug efflux RND membrane fusion protein compare
PP_3623 -2.0 -12.2 vanillin dehydrogenase, cytochrome c component (from data) compare
PP_1615 -1.8 -9.2 Transcriptional regulator, LysR family compare
PP_1789 -1.6 -5.9 Hydrolase, haloacid dehalogenase-like family compare
PP_3493 -1.5 -7.9 Transcriptional regulator, LysR family compare
PP_1236 -1.3 -5.8 putative Glycine cleavage system transcriptional repressor compare
PP_1395 -1.0 -6.5 Transcriptional regulator, AraC family compare


Specific phenotypes for carbon source Vanillin across organisms