Experiment set5IT085 for Pseudomonas putida KT2440

Compare to:

Vanillin carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_1292 -5.8 -8.9 Cyclic pyranopterin monophosphate synthase accessory protein compare
PP_1377 -5.8 -8.0 beta-ketoadipyl-CoA thiolase compare
PP_3736 -5.7 -10.8 vanillate O-demethylase oxygenase subunit compare
PP_4656 -5.4 -9.7 protocatechuate 3,4-dioxygenase beta chain compare
PP_3952 -5.1 -10.9 3-oxoadipate CoA-transferase subunit A compare
PP_2123 -5.1 -12.3 molybdenum::molybdopterin ligase compare
PP_1294 -5.0 -6.3 molybdopterin synthase large subunit compare
PP_1379 -5.0 -8.3 3-carboxy-cis,cis-muconate cycloisomerase compare
PP_3737 -4.8 -10.1 vanillate O-demethylase oxidoreductase compare
PP_1380 -4.7 -8.3 3-oxoadipate enol-lactonase 2 compare
PP_1375 -4.6 -16.4 transcription regulatory protein (pca regulon) compare
PP_4655 -4.6 -8.4 protocatechuate 3,4-dioxygenase alpha chain compare
PP_3828 -4.2 -10.9 Molybdate-binding periplasmic protein compare
PP_3829 -3.8 -7.5 Molybdenum transport system permease protein ModB compare
PP_3621 -3.6 -8.7 vanillin dehydrogenase, iorA-like component (from data) compare
PP_1616 -3.6 -13.0 formaldehyde dehydrogenase, glutathione-dependent compare
PP_3622 -3.3 -16.3 vanillin dehydrogenase, iorB-like component (from data) compare
PP_5161 -3.3 -6.8 putative lysophospholipase compare
PP_3830 -3.2 -11.9 Molybdenum import ATP-binding protein ModC compare
PP_4597 -2.4 -5.9 Cyclic pyranopterin monophosphate synthase compare
PP_3455 -2.2 -6.5 Multidrug efflux RND membrane fusion protein compare
PP_3623 -2.1 -9.7 vanillin dehydrogenase, cytochrome c component (from data) compare
PP_3456 -2.1 -8.8 Multidrug resistance protein MexB compare
PP_4231 -1.8 -5.3 putative Xanthine dehydrogenase accessory factor compare
PP_1615 -1.6 -5.8 Transcriptional regulator, LysR family compare
PP_3493 -1.5 -8.2 Transcriptional regulator, LysR family compare
PP_1378 -1.4 -5.0 alpha-ketoglutarate permease compare
PP_4779 -1.3 -9.7 AMP nucleosidase compare
PP_4622 -1.3 -5.3 Hmg transcriptional repressor compare
PP_0909 -1.2 -6.6 conserved exported protein of unknown function compare


Specific phenotypes for carbon source Vanillin across organisms