Experiment set5IT084 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu1687 -2.3 -7.4 anthranilate phosphoribosyltransferase compare
Atu0434 -2.2 -3.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0017 -2.2 -2.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2289 -2.1 -10.2 anthranilate synthase component I and II compare
Atu2728 -1.8 -5.7 beta (1-->2) glucan export ATP-binding protein compare
Atu1307 -1.7 -7.1 dihydroorotase compare
Atu1308 -1.7 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0103 -1.6 -8.1 penicillin-binding protein compare
Atu4773 -1.5 -2.5 two component response regulator compare
Atu1688 -1.5 -4.5 indole-3-glycerol-phosphate synthase compare
Atu0399 -1.5 -5.4 dihydroorotase compare
Atu0184 -1.5 -2.2 glucokinase compare
Atu0346 -1.4 -3.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1446 -1.4 -2.3 two component response regulator compare
Atu1028 -1.4 -3.3 hypothetical protein compare
Atu0298 -1.3 -6.3 orotidine 5 compare
Atu3121 -1.3 -1.6 cold shock protein compare
Atu0486 -1.3 -4.8 dihydroorotate dehydrogenase compare
Atu0041 -1.3 -2.1 glutamine amidotransferase compare
Atu0894 -1.2 -3.1 ABC transporter, membrane spanning protein compare
Atu0400 -1.2 -2.7 orotate phosphoribosyltransferase compare
Atu0876 -1.2 -1.5 superoxide dismutase compare
Atu1686 -1.1 -7.6 peptidyl-prolyl cis-trans isomerse D compare
Atu0361 -1.0 -2.7 transcriptional regulator compare
Atu4616 -1.0 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu1589 -1.0 -4.3 aminotransferase, class I compare
Atu0050 -1.0 -4.3 two component response regulator compare
Atu1163 -1.0 -1.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0971 -1.0 -3.9 two component sensor kinase compare
Atu2710 -0.9 -5.1 hypothetical protein compare
Atu3754 -0.9 -5.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2073 -0.9 -4.2 membrane protein compare
Atu4075 -0.9 -3.9 glycogen synthase compare
Atu1077 -0.9 -1.8 DNA repair protein compare
Atu0201 -0.9 -1.8 hypothetical protein compare
Atu4897 -0.9 -2.2 hypothetical protein compare
Atu2800 -0.9 -1.5 precorrin-3B C17-methyltransferase compare
Atu1810 -0.9 -1.2 hypothetical protein compare
Atu1030 -0.9 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4317 -0.9 -2.2 TetR family transcriptional regulator compare
Atu0795 -0.9 -1.9 hypothetical protein compare
Atu0986 -0.8 -1.2 hypothetical protein compare
Atu0598 -0.8 -4.0 phosphogluconate dehydratase compare
Atu3469 -0.8 -1.9 phosphoglyceromutase compare
Atu0043 -0.8 -2.1 imidazoleglycerol-phosphate dehydratase compare
Atu0769 -0.8 -1.5 protoheme IX farnesyltransferase compare
Atu1874 -0.8 -1.4 RecA protein compare
Atu3727 -0.8 -2.3 hypothetical protein compare
Atu3763 -0.8 -1.7 hypothetical protein compare
Atu0040 -0.8 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0051 -0.8 -2.4 two component sensor kinase compare
Atu1542 -0.8 -2.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2793 -0.8 -4.0 cobyrinic acid a,c-diamide synthase compare
Atu4711 -0.7 -2.9 two component sensor kinase compare
Atu2344 -0.7 -2.1 lactoylglutathione lyase compare
Atu1588 -0.7 -4.0 homoserine dehydrogenase compare
Atu0647 -0.7 -3.1 phosphoribosylamine--glycine ligase compare
Atu2796 -0.7 -2.9 precorrin-4 C11-methyltransferase compare
Atu2801 -0.7 -2.8 precorrin-2 C20 methyltransferase compare
Atu4792 -0.7 -1.1 hypothetical protein compare
Atu1844 -0.7 -1.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1891 -0.7 -2.8 cobalamin biosynthesis protein compare
Atu1739 -0.7 -3.1 permease compare
Atu6114 -0.7 -1.0 hypothetical protein compare
Atu3634 -0.7 -3.5 penicillin-binding protein dacf precursor compare
Atu1644 -0.7 -2.6 hypothetical protein compare
Atu1075 -0.7 -3.3 amidophosphoribosyltransferase compare
Atu2802 -0.7 -3.5 precorrin-8X methylmutase compare
Atu0535 -0.6 -2.4 hypothetical protein compare
Atu2057 -0.6 -1.5 DNA helicase II compare
Atu1149 -0.6 -1.2 adenylate cyclase compare
Atu0977 -0.6 -2.5 serine protease DO-like protease compare
Atu0953 -0.6 -0.9 hypothetical protein compare
Atu4618 -0.6 -4.1 dTDP-rhamnose-3,5-epimerase compare
Atu0276 -0.6 -1.4 hypothetical protein compare
Atu0036 -0.6 -2.1 hypothetical protein compare
Atu1062 -0.6 -1.3 phosphatidylserine synthase compare
Atu1754 -0.6 -1.0 hypothetical protein compare
Atu1845 -0.6 -3.0 phosphoribosylformylglycinamidine synthase I compare
Atu2294 -0.6 -2.5 aminoglycoside N6'-acetyltransferase compare
Atu2450 -0.6 -1.5 hypothetical protein compare
Atu2650 -0.6 -4.0 glycerol-3-phosphate dehydrogenase compare
Atu0269 -0.6 -2.5 exodeoxyribonuclease VII large subunit compare
Atu0972 -0.6 -2.8 lipA protein compare
Atu3750 -0.6 -2.1 thiamine-phosphate pyrophosphorylase compare
Atu2821 -0.6 -2.9 transcriptional regulator, GntR family compare
Atu3598 -0.6 -1.0 thiol:disulfide interchange protein compare
Atu5540 -0.6 -0.6 hypothetical protein compare
Atu1606 -0.6 -2.7 methionine aminopeptidase compare
Atu4887 -0.6 -2.2 hypothetical protein compare
Atu3707 -0.6 -1.4 phosphoserine aminotransferase compare
Atu4567 -0.6 -3.7 ROK family transcriptional regulator compare
Atu4458 -0.6 -2.3 hypothetical protein compare
Atu2040 -0.6 -3.0 phosphoserine phosphatase compare
Atu2809 -0.6 -3.5 cobalamin biosynthesis protein compare
Atu2804 -0.5 -3.6 cobaltochelatase subunit compare
Atu0401 -0.5 -2.4 fructokinase compare
Atu4418 -0.5 -2.4 glutaryl-CoA dehydrogenase compare
Atu3353 -0.5 -3.6 mannose-1-phosphate guanylyltransferase compare
Atu3481 -0.5 -2.8 enoyl-CoA hydratase compare
Atu1646 -0.5 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3183 -0.5 -0.6 hypothetical protein compare
Atu3706 -0.5 -2.9 D-3-phosphoglycerate dehydrogenase compare
Atu0344 -0.5 -1.5 hypothetical protein compare
Atu2662 -0.5 -0.6 acetyltransferase compare
Atu4346 -0.5 -2.6 hypothetical protein compare
Atu8202 -0.5 -2.7 hypothetical protein compare
Atu1023 -0.5 -1.3 hypothetical protein compare
Atu1518 -0.5 -2.5 transcriptional regulator, Fur family compare
Atu1021 -0.5 -1.0 outer membrane protein compare
Atu3018 -0.5 -1.7 hypothetical protein compare
Atu5164 -0.5 -0.5 type IV secretion protein AvhB3 compare
Atu1466 -0.5 -1.2 hypothetical protein compare
Atu2808 -0.5 -2.9 cobyric acid synthase compare
Atu1054 -0.5 -2.0 hypothetical protein compare
Atu2832 -0.5 -1.6 tRNA modification GTPase compare
Atu4615 -0.5 -3.5 glucose-1-phosphate thymidylyltransferase compare
Atu0939 -0.5 -2.0 PemI protein compare
Atu0230 -0.5 -1.2 hypothetical protein compare
Atu2795 -0.5 -2.6 cobalamin biosynthetic protein compare
Atu0781 -0.5 -2.2 hypothetical protein compare
Atu2807 -0.5 -2.8 cob(I)alamin adenosyltransferase compare
Atu2207 -0.5 -2.2 two component sensor kinase compare
Atu3712 -0.5 -1.2 hypothetical protein compare
Atu3026 -0.5 -2.5 short chain dehydrogenase compare
Atu2127 -0.5 -3.4 L-carnitine dehydratase compare
Atu1359 -0.5 -0.7 dnaK deletion suppressor protein compare
Atu1468 -0.5 -2.7 hypothetical protein compare
Atu4873 -0.5 -2.3 TetR family transcriptional regulator compare
Atu1455 -0.5 -1.4 hypothetical protein compare
Atu0185 -0.5 -2.7 methylglyoxal synthase compare
Atu4878 -0.5 -2.2 hypothetical protein compare
Atu2684 -0.5 -0.7 hypothetical protein compare
Atu1182 -0.5 -1.2 hypothetical protein compare
Atu0931 -0.5 -3.2 penicillin binding protein compare
Atu0029 -0.5 -1.8 S-adenosylhomocysteine hydrolase compare
Atu8145 -0.5 -1.3 hypothetical protein compare
Atu1620 -0.5 -3.2 triosephosphate isomerase compare
Atu0895 -0.5 -1.9 ABC transporter, substrate binding protein compare
Atu8152 -0.5 -2.3 hypothetical protein compare
Atu2267 -0.5 -2.4 hypothetical protein compare
Atu1009 -0.5 -1.1 hypothetical protein compare
Atu4617 -0.5 -2.9 dTDP-D-glucose-4,6-dehydratase compare
Atu0031 -0.5 -0.8 PTS system, IIA component compare
Atu1624 -0.5 -2.3 transcriptional regulator, TetR family compare
Atu0751 -0.5 -1.9 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu1327 -0.5 -1.7 NADH-ubiquinone oxidoreductase compare
Atu1364 -0.5 -2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1678 -0.4 -2.1 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu3311 -0.4 -3.9 phosphomannose isomerase compare
Atu3016 -0.4 -2.3 phosphoglyceromutase compare
Atu3480 -0.4 -3.3 hydroxymethylglutaryl-CoA lyase compare
Atu0888 -0.4 -1.6 transcriptional regulator, MerR family compare
Atu3335 -0.4 -2.7 3-methyladenine DNA glycosylase compare
Atu2083 -0.4 -1.4 DNA repair protein RecN compare
Atu4875 -0.4 -2.6 hypothetical protein compare
Atu2036 -0.4 -3.3 acetolactate synthase III, large subunit compare
Atu3798 -0.4 -2.5 TetR family transcriptional regulator compare
Atu2766 -0.4 -3.8 NAD-glutamate dehydrogenase compare
Atu1801 -0.4 -1.2 hypothetical protein compare
Atu5077 -0.4 -2.0 hypothetical protein compare
Atu3593 -0.4 -2.5 hypothetical protein compare
Atu1141 -0.4 -1.4 Phosphoribosylglycinamide synthetase compare
Atu2676 -0.4 -2.1 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu1495 -0.4 -1.4 hypothetical protein compare
Atu1573 -0.4 -0.8 hypothetical protein compare
Atu0353 -0.4 -2.0 acetyltransferase compare
Atu1850 -0.4 -1.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3008 -0.4 -0.5 hypothetical protein compare
Atu8138 -0.4 -0.9 hypothetical protein compare
Atu1355 -0.4 -2.5 hypothetical protein compare
Atu2183 -0.4 -2.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0048 -0.4 -3.0 hypothetical protein compare
Atu2052 -0.4 -2.4 hypothetical protein compare
Atu5106 -0.4 -1.5 DNA binding protein compare
Atu0205 -0.4 -2.8 methylmalonate-semialdehyde dehydrogenase compare
Atu2803 -0.4 -1.2 Cobalamin biosynthesis associated protein compare
Atu2824 -0.4 -2.0 hypothetical protein compare
Atu3755 -0.4 -1.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2554 -0.4 -0.8 lysyl-tRNA synthetase compare
Atu0959 -0.4 -2.1 hypothetical protein compare
Atu1056 -0.4 -2.4 hypothetical protein compare
Atu0190 -0.4 -2.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3036 -0.4 -1.8 dipeptide ABC transporter permease compare
Atu2122 -0.4 -2.3 lytic murein transglycosylase compare
Atu0677 -0.4 -1.0 hypothetical protein compare
Atu2504 -0.4 -2.0 transcriptional regulator, GntR family compare
Atu2555 -0.4 -1.5 L-lysine 2,3-aminomutase compare
Atu4884 -0.4 -1.1 hypothetical protein compare
Atu2789 -0.4 -1.0 hypothetical protein compare
Atu1447 -0.4 -1.1 two component sensor kinase compare
Atu1380 -0.4 -2.3 zinc metallopeptidase compare
Atu3075 -0.4 -2.0 TetR family transcriptional regulator compare
Atu4893 -0.4 -1.7 hypothetical protein compare
Atu0319 -0.4 -0.6 ubiquinone biosynthesis protein compare
Atu2511 -0.4 -2.2 D-alanine aminotransferase compare
Atu1103 -0.4 -1.1 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3342 -0.4 -1.8 trehalose utilization-like protein compare
Atu0354 -0.4 -0.7 ferric uptake regulator compare
Atu4155 -0.4 -2.0 aliphatic sulfonate ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a_control experiments