Experiment set5IT082 for Agrobacterium fabrum C58

Compare to:

R2A with Hydrogen peroxide 0.1 mM

200 most important genes:

  gene name fitness t score description  
Atu0039 -3.0 -3.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu1687 -2.7 -6.7 anthranilate phosphoribosyltransferase compare
Atu2394 -2.6 -8.7 Regulator of Biofilm formation, Fnr Family compare
Atu1688 -2.5 -5.1 indole-3-glycerol-phosphate synthase compare
Atu2684 -2.4 -2.5 hypothetical protein compare
Atu0017 -2.2 -2.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2289 -2.0 -10.3 anthranilate synthase component I and II compare
Atu1308 -2.0 -5.9 aspartate carbamoyl transferase catalytic subunit compare
Atu1307 -1.9 -4.3 dihydroorotase compare
Atu0400 -1.7 -5.2 orotate phosphoribosyltransferase compare
Atu0103 -1.6 -7.8 penicillin-binding protein compare
Atu2728 -1.6 -5.6 beta (1-->2) glucan export ATP-binding protein compare
Atu0769 -1.6 -1.9 protoheme IX farnesyltransferase compare
Atu0346 -1.6 -4.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0434 -1.6 -3.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1077 -1.5 -3.2 DNA repair protein compare
Atu0093 -1.5 -2.4 Recombination protein compare
Atu1028 -1.5 -2.3 hypothetical protein compare
Atu4773 -1.5 -2.6 two component response regulator compare
Atu2554 -1.5 -2.1 lysyl-tRNA synthetase compare
Atu0184 -1.5 -2.3 glucokinase compare
Atu8054 -1.4 -0.9 hypothetical protein compare
Atu1588 -1.4 -6.9 homoserine dehydrogenase compare
Atu0399 -1.3 -4.7 dihydroorotase compare
Atu1874 -1.3 -1.9 RecA protein compare
Atu8087 -1.2 -1.0 putative peptidoglycan binding protein compare
Atu2083 -1.2 -2.9 DNA repair protein RecN compare
Atu1686 -1.2 -6.7 peptidyl-prolyl cis-trans isomerse D compare
Atu2036 -1.2 -8.9 acetolactate synthase III, large subunit compare
Atu0361 -1.2 -3.0 transcriptional regulator compare
Atu4317 -1.2 -2.4 TetR family transcriptional regulator compare
Atu0051 -1.2 -3.8 two component sensor kinase compare
Atu1039 -1.1 -3.0 DNA repair protein RecO compare
Atu4616 -1.0 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu1129 -1.0 -5.2 excinuclease ABC chain C compare
Atu3014 -1.0 -2.4 hypothetical protein compare
Atu0298 -1.0 -4.0 orotidine 5 compare
Atu3486 -1.0 -2.7 DeoR family transcriptional regulator compare
Atu0486 -1.0 -3.6 dihydroorotate dehydrogenase compare
Atu2057 -1.0 -1.9 DNA helicase II compare
Atu1542 -1.0 -4.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1845 -1.0 -3.2 phosphoribosylformylglycinamidine synthase I compare
Atu1030 -1.0 -1.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0723 -0.9 -1.6 FAD dependent oxidoreductase compare
Atu0073 -0.9 -3.3 recF-like protein compare
Atu0041 -0.9 -1.0 glutamine amidotransferase compare
Atu3634 -0.9 -3.6 penicillin-binding protein dacf precursor compare
Atu1354 -0.9 -1.1 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1891 -0.9 -3.2 cobalamin biosynthesis protein compare
Atu2193 -0.9 -0.9 hypothetical protein compare
Atu1446 -0.9 -1.5 two component response regulator compare
Atu0269 -0.9 -2.9 exodeoxyribonuclease VII large subunit compare
Atu4890 -0.9 -1.7 IS426 transposase compare
Atu2183 -0.8 -5.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1904 -0.8 -2.2 transcriptional regulator compare
Atu8161 -0.8 -1.3 hypothetical protein compare
Atu1589 -0.8 -4.0 aminotransferase, class I compare
Atu2125 -0.8 -1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3593 -0.8 -4.8 hypothetical protein compare
Atu3353 -0.8 -5.3 mannose-1-phosphate guanylyltransferase compare
Atu2796 -0.8 -4.4 precorrin-4 C11-methyltransferase compare
Atu3469 -0.8 -1.7 phosphoglyceromutase compare
Atu4618 -0.8 -5.4 dTDP-rhamnose-3,5-epimerase compare
Atu2040 -0.8 -2.8 phosphoserine phosphatase compare
Atu1254 -0.8 -1.2 transcriptional regulator, ArsR family compare
Atu3032 -0.8 -2.5 hypothetical protein compare
Atu0971 -0.8 -2.7 two component sensor kinase compare
Atu4166 -0.8 -1.7 UDP-glucose 4-epimerase compare
Atu0354 -0.8 -1.3 ferric uptake regulator compare
Atu0972 -0.8 -2.6 lipA protein compare
Atu1444 -0.8 -3.4 nitrogen regulation protein compare
Atu1850 -0.7 -1.4 phosphoribosylformylglycinamidine synthetase II compare
Atu4161 -0.7 -1.7 hypothetical protein compare
Atu2650 -0.7 -4.0 glycerol-3-phosphate dehydrogenase compare
Atu0647 -0.7 -2.7 phosphoribosylamine--glycine ligase compare
Atu2477 -0.7 -3.5 DNA oxidation protective protein, not DNA-binding compare
Atu0106 -0.7 -2.3 cold shock protein compare
Atu2163 -0.7 -1.0 hypothetical protein compare
Atu4613 -0.7 -5.8 glycosyltransferase compare
Atu0272 -0.7 -1.7 transcriptional regulator, MarR family compare
Atu3730 -0.7 -1.1 hypothetical protein compare
Atu2800 -0.7 -2.0 precorrin-3B C17-methyltransferase compare
Atu3496 -0.7 -2.1 hypothetical protein compare
Atu4792 -0.7 -1.7 hypothetical protein compare
Atu0050 -0.7 -3.4 two component response regulator compare
Atu1075 -0.7 -3.4 amidophosphoribosyltransferase compare
Atu4615 -0.7 -3.6 glucose-1-phosphate thymidylyltransferase compare
Atu1355 -0.7 -2.9 hypothetical protein compare
Atu3311 -0.7 -6.2 phosphomannose isomerase compare
Atu6114 -0.7 -1.3 hypothetical protein compare
Atu2124 -0.7 -3.6 transcriptional regulator, ArsR family compare
Atu0185 -0.7 -2.3 methylglyoxal synthase compare
Atu2802 -0.7 -4.0 precorrin-8X methylmutase compare
Atu4873 -0.7 -3.3 TetR family transcriptional regulator compare
Atu0062 -0.7 -3.6 transcriptional regulator, ROK family compare
Atu4630 -0.7 -1.5 hypothetical protein compare
Atu0470 -0.7 -1.4 hypothetical protein compare
Atu2368 -0.7 -1.0 hypothetical protein compare
Atu1513 -0.7 -2.9 ABC excinuclease subunit A compare
Atu3755 -0.6 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0435 -0.6 -1.5 tRNA-Gly compare
Atu3754 -0.6 -2.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1739 -0.6 -1.7 permease compare
Atu2235 -0.6 -1.1 hypothetical protein compare
Atu4614 -0.6 -3.2 glycosyltransferase compare
Atu1380 -0.6 -2.8 zinc metallopeptidase compare
Atu1291 -0.6 -1.0 hypothetical protein compare
Atu5125 -0.6 -2.6 GntR family transcriptional regulator compare
Atu3706 -0.6 -3.6 D-3-phosphoglycerate dehydrogenase compare
Atu1359 -0.6 -0.8 dnaK deletion suppressor protein compare
Atu2804 -0.6 -4.5 cobaltochelatase subunit compare
Atu3579 -0.6 -2.9 lactoylglutathione lyase compare
Atu2648 -0.6 -1.6 hypothetical protein compare
Atu3481 -0.6 -2.8 enoyl-CoA hydratase compare
Atu5158 -0.6 -2.4 hypothetical protein compare
Atu2789 -0.6 -2.0 hypothetical protein compare
Atu1692 -0.6 -1.7 hypothetical protein compare
Atu2809 -0.6 -3.9 cobalamin biosynthesis protein compare
Atu2710 -0.6 -2.7 hypothetical protein compare
Atu0630 -0.6 -1.0 hypothetical protein compare
Atu2200 -0.6 -1.8 cold shock protein compare
Atu1606 -0.6 -1.8 methionine aminopeptidase compare
Atu4099 -0.6 -3.1 hypothetical protein compare
Atu1141 -0.6 -2.5 Phosphoribosylglycinamide synthetase compare
Atu2464 -0.6 -1.7 formyltetrahydrofolate deformylase compare
Atu1725 -0.6 -2.3 hypothetical protein compare
Atu0322 -0.6 -3.8 enoyl CoA hydratase compare
Atu6009 -0.6 -2.1 indole-3-lactate synthase compare
Atu2807 -0.6 -3.1 cob(I)alamin adenosyltransferase compare
Atu2799 -0.6 -2.5 precorrin-6x reductase compare
Atu4617 -0.6 -4.0 dTDP-D-glucose-4,6-dehydratase compare
Atu0048 -0.6 -4.3 hypothetical protein compare
Atu2201 -0.6 -1.3 hydrolase compare
Atu2798 -0.6 -2.0 precorrin-6y methyltransferase compare
Atu1182 -0.6 -1.4 hypothetical protein compare
Atu3018 -0.6 -1.6 hypothetical protein compare
Atu0043 -0.6 -1.4 imidazoleglycerol-phosphate dehydratase compare
Atu1339 -0.6 -1.5 ribonuclease E compare
Atu5485 -0.6 -1.4 hypothetical protein compare
Atu0977 -0.6 -1.7 serine protease DO-like protease compare
Atu0815 -0.6 -1.1 hypothetical protein compare
Atu2675 -0.6 -1.7 hypothetical protein compare
Atu2511 -0.6 -2.5 D-alanine aminotransferase compare
Atu3668 -0.6 -2.6 siderophore biosynthesis protein compare
Atu2634 -0.6 -1.2 hypothetical protein compare
Atu2787 -0.6 -0.6 hypothetical protein compare
Atu0029 -0.6 -1.9 S-adenosylhomocysteine hydrolase compare
Atu1103 -0.6 -1.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2286 -0.6 -0.9 hypothetical protein compare
Atu1780 -0.6 -3.5 ATP-dependent DNA helicase compare
Atu2344 -0.6 -1.3 lactoylglutathione lyase compare
Atu0038 -0.6 -2.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu4458 -0.5 -1.8 hypothetical protein compare
Atu1364 -0.5 -2.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0166 -0.5 -2.2 hypothetical protein compare
Atu3721 -0.5 -0.7 hypothetical protein compare
Atu1021 -0.5 -1.1 outer membrane protein compare
Atu2001 -0.5 -3.6 excinuclease ABC subunit B compare
Atu0421 -0.5 -0.8 ABC transporter, membrane spanning protein compare
Atu2808 -0.5 -3.0 cobyric acid synthase compare
Atu1163 -0.5 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3011 -0.5 -1.5 ArsR family transcriptional regulator compare
Atu2795 -0.5 -2.7 cobalamin biosynthetic protein compare
Atu3466 -0.5 -1.7 ArsR family transcriptional regulator compare
Atu3005 -0.5 -0.7 hypothetical protein compare
Atu1770 -0.5 -3.8 glutamine synthetase compare
Atu3265 -0.5 -2.4 hypothetical protein compare
Atu0502 -0.5 -2.4 acetyl-CoA acetyltransferase compare
Atu5088 -0.5 -1.1 hypothetical protein compare
Atu4108 -0.5 -3.6 ribonuclease D compare
Atu4896 -0.5 -1.2 acetyltransferase compare
Atu2792 -0.5 -2.7 hypothetical protein compare
Atu4884 -0.5 -1.4 hypothetical protein compare
Atu4711 -0.5 -3.1 two component sensor kinase compare
Atu0566 -0.5 -1.1 hypothetical protein compare
Atu2379 -0.5 -3.1 phosphomannomutase compare
Atu1009 -0.5 -1.3 hypothetical protein compare
Atu3393 -0.5 -1.4 pseudoazurin compare
Atu3750 -0.5 -0.9 thiamine-phosphate pyrophosphorylase compare
Atu1639 -0.5 -1.2 hypothetical protein compare
Atu1844 -0.5 -1.2 Phosphoribosylformylglycinamidine synthetase compare
Atu4075 -0.5 -2.4 glycogen synthase compare
Atu0698 -0.5 -2.2 hypothetical protein compare
Atu0920 -0.5 -1.9 hypothetical protein compare
Atu0413 -0.5 -0.8 stress induced protein compare
Atu1701 -0.5 -1.3 protein-L-isoaspartate O-methyltransferase compare
Atu1503 -0.5 -0.7 hypothetical protein compare
Atu1619 -0.5 -2.0 protein-export membrane protein SECG compare
Atu4153 -0.5 -3.1 aldehyde dehydrogenase compare
Atu3776 -0.5 -2.3 hypothetical protein compare
Atu1602 -0.5 -2.3 transcriptional activator, Crp family compare
Atu2753 -0.5 -2.9 ATP-dependent helicase compare
Atu1968 -0.5 -1.2 hypothetical protein compare
Atu2790 -0.5 -0.8 3-isopropylmalate dehydratase, small subunit compare
Atu2205 -0.5 -1.5 transcriptional regulator, MarR family compare
Atu4881 -0.5 -2.5 hypothetical protein compare
Atu1301 -0.5 -0.9 hypothetical protein compare
Atu2067 -0.5 -0.5 hypothetical protein compare
Atu0602 -0.5 -3.0 glutamine synthetase compare
Atu4499 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Hydrogen peroxide in Agrobacterium fabrum C58

For stress Hydrogen peroxide across organisms