Experiment set5IT079 for Agrobacterium fabrum C58

Compare to:

R2A with Ticarcillin disodium salt 0.01 mM

200 most important genes:

  gene name fitness t score description  
Atu2710 -5.0 -11.2 hypothetical protein compare
Atu0972 -3.9 -6.9 lipA protein compare
Atu1687 -2.3 -6.2 anthranilate phosphoribosyltransferase compare
Atu0346 -2.1 -3.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1359 -1.9 -1.8 dnaK deletion suppressor protein compare
Atu0400 -1.9 -5.9 orotate phosphoribosyltransferase compare
Atu3712 -1.8 -2.3 hypothetical protein compare
Atu1307 -1.8 -3.5 dihydroorotase compare
Atu0399 -1.8 -4.4 dihydroorotase compare
Atu0298 -1.8 -6.7 orotidine 5 compare
Atu1644 -1.7 -5.0 hypothetical protein compare
Atu0434 -1.7 -3.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0486 -1.7 -4.7 dihydroorotate dehydrogenase compare
Atu2289 -1.7 -10.3 anthranilate synthase component I and II compare
Atu1645 -1.7 -7.0 ABC transporter, substrate binding protein compare
Atu0647 -1.7 -6.8 phosphoribosylamine--glycine ligase compare
Atu1149 -1.6 -2.1 adenylate cyclase compare
Atu1647 -1.5 -8.6 ABC transporter, membrane spanning protein compare
Atu2585 -1.5 -3.9 hypothetical protein compare
Atu4317 -1.5 -4.2 TetR family transcriptional regulator compare
Atu2113 -1.5 -2.7 N-acetylmuramoyl-L-alanine amidase compare
Atu1646 -1.5 -5.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1140 -1.5 -4.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1688 -1.5 -4.3 indole-3-glycerol-phosphate synthase compare
Atu1373 -1.5 -7.3 hypothetical protein compare
Atu0017 -1.4 -2.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0103 -1.4 -8.4 penicillin-binding protein compare
Atu1163 -1.4 -2.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3469 -1.4 -2.8 phosphoglyceromutase compare
Atu3353 -1.4 -7.8 mannose-1-phosphate guanylyltransferase compare
Atu2183 -1.4 -7.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3754 -1.4 -3.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1131 -1.3 -4.9 outer membrane protein compare
Atu4617 -1.3 -8.9 dTDP-D-glucose-4,6-dehydratase compare
Atu0043 -1.3 -2.1 imidazoleglycerol-phosphate dehydratase compare
Atu0184 -1.3 -2.2 glucokinase compare
Atu1308 -1.3 -3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu1685 -1.2 -1.1 hypothetical protein compare
Atu1446 -1.2 -1.9 two component response regulator compare
Atu3518 -1.2 -7.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2017 -1.2 -1.6 hypothetical protein compare
Atu1141 -1.2 -4.7 Phosphoribosylglycinamide synthetase compare
Atu3311 -1.2 -9.5 phosphomannose isomerase compare
Atu1075 -1.2 -5.3 amidophosphoribosyltransferase compare
Atu0845 -1.2 -4.2 hypothetical protein compare
Atu1686 -1.1 -7.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0941 -1.1 -1.1 hypothetical protein compare
Atu0040 -1.1 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3755 -1.1 -4.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4615 -1.1 -6.6 glucose-1-phosphate thymidylyltransferase compare
Atu1447 -1.1 -1.8 two component sensor kinase compare
Atu2796 -1.1 -3.9 precorrin-4 C11-methyltransferase compare
Atu0257 -1.1 -7.3 hypothetical protein compare
Atu1542 -1.1 -5.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1588 -1.1 -6.3 homoserine dehydrogenase compare
Atu4613 -1.0 -7.9 glycosyltransferase compare
Atu2798 -1.0 -3.8 precorrin-6y methyltransferase compare
Atu1380 -1.0 -4.9 zinc metallopeptidase compare
Atu4618 -1.0 -5.6 dTDP-rhamnose-3,5-epimerase compare
Atu0976 -1.0 -1.5 cycL protein compare
Atu1351 -1.0 -3.9 hypothetical protein compare
Atu2083 -0.9 -2.4 DNA repair protein RecN compare
Atu2125 -0.9 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu4166 -0.9 -2.2 UDP-glucose 4-epimerase compare
Atu1021 -0.9 -2.0 outer membrane protein compare
Atu2799 -0.9 -3.9 precorrin-6x reductase compare
Atu4149 -0.9 -4.1 UDP-glucose 6-dehydrogenase compare
Atu1223 -0.9 -0.9 hypothetical protein compare
Atu8087 -0.9 -1.2 putative peptidoglycan binding protein compare
Atu2683 -0.9 -1.7 hypothetical protein compare
Atu2804 -0.9 -6.6 cobaltochelatase subunit compare
Atu1175 -0.9 -1.7 hypothetical protein compare
Atu0029 -0.9 -2.6 S-adenosylhomocysteine hydrolase compare
Atu0421 -0.9 -1.2 ABC transporter, membrane spanning protein compare
Atu2809 -0.9 -4.9 cobalamin biosynthesis protein compare
Atu0401 -0.9 -3.7 fructokinase compare
Atu1759 -0.9 -5.2 L-serine dehydratase compare
Atu2379 -0.9 -5.0 phosphomannomutase compare
Atu2803 -0.9 -2.1 Cobalamin biosynthesis associated protein compare
Atu3707 -0.8 -2.9 phosphoserine aminotransferase compare
Atu3739 -0.8 -2.0 phosphoglycerate kinase compare
Atu2577 -0.8 -6.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu2684 -0.8 -1.2 hypothetical protein compare
Atu0687 -0.8 -1.3 hypothetical protein compare
Atu1354 -0.8 -1.1 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2807 -0.8 -4.2 cob(I)alamin adenosyltransferase compare
Atu2040 -0.8 -2.7 phosphoserine phosphatase compare
Atu0422 -0.8 -1.6 ABC transporter, membrane spanning protein compare
Atu5045 -0.8 -1.3 hypothetical protein compare
Atu2554 -0.8 -1.6 lysyl-tRNA synthetase compare
Atu3763 -0.8 -1.6 hypothetical protein compare
Atu4614 -0.8 -5.8 glycosyltransferase compare
Atu2590 -0.8 -3.8 hypothetical protein compare
Atu0097 -0.8 -3.8 hypothetical protein compare
Atu0361 -0.8 -2.2 transcriptional regulator compare
Atu0756 -0.8 -4.4 phosphoglycerate mutase compare
Atu6186 -0.8 -2.4 virA/G regulated protein compare
Atu2795 -0.8 -4.5 cobalamin biosynthetic protein compare
Atu4610 -0.8 -5.9 sugar nucleotide epimerase/dehydratase compare
Atu0886 -0.8 -1.4 hypothetical protein compare
Atu2484 -0.8 -1.5 hypothetical protein compare
Atu3598 -0.8 -0.7 thiol:disulfide interchange protein compare
Atu3011 -0.8 -2.3 ArsR family transcriptional regulator compare
Atu0544 -0.8 -2.1 hypothetical protein compare
Atu3593 -0.8 -4.2 hypothetical protein compare
Atu2591 -0.8 -3.2 glucosyltransferase compare
Atu1219 -0.8 -0.5 hypothetical protein compare
Atu2207 -0.7 -2.2 two component sensor kinase compare
Atu4072 -0.7 -0.9 nodulation protein N compare
Atu1445 -0.7 -4.0 two component sensor kinase compare
Atu1845 -0.7 -2.1 phosphoribosylformylglycinamidine synthase I compare
Atu1741 -0.7 -3.0 hypothetical protein compare
Atu4711 -0.7 -4.2 two component sensor kinase compare
Atu3480 -0.7 -4.6 hydroxymethylglutaryl-CoA lyase compare
Atu2073 -0.7 -2.3 membrane protein compare
Atu3634 -0.7 -2.3 penicillin-binding protein dacf precursor compare
Atu1844 -0.7 -1.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1464 -0.7 -2.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu1581 -0.7 -1.7 hypothetical protein compare
Atu0153 -0.7 -2.3 transcriptional regulator, Fur family compare
Atu0640 -0.7 -0.8 hypothetical protein compare
Atu3182 -0.7 -2.4 hypothetical protein compare
Atu1225 -0.7 -1.1 hypothetical protein compare
Atu8161 -0.7 -1.5 hypothetical protein compare
Atu1779 -0.7 -1.7 hypothetical protein compare
Atu4075 -0.7 -3.2 glycogen synthase compare
Atu1891 -0.7 -1.5 cobalamin biosynthesis protein compare
Atu1213 -0.7 -2.4 hypothetical protein compare
Atu3706 -0.7 -3.4 D-3-phosphoglycerate dehydrogenase compare
Atu2270 -0.7 -1.4 ATP-dependent Clp protease, proteolytic subunit compare
Atu4108 -0.7 -3.5 ribonuclease D compare
Atu2238 -0.7 -4.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4148 -0.7 -2.2 UDP-glucuronic acid epimerase compare
Atu2802 -0.6 -3.2 precorrin-8X methylmutase compare
Atu0598 -0.6 -4.4 phosphogluconate dehydratase compare
Atu2043 -0.6 -3.3 htrA family protein compare
Atu2805 -0.6 -2.8 cobalamin synthesis protein compare
Atu2267 -0.6 -3.0 hypothetical protein compare
Atu1028 -0.6 -1.3 hypothetical protein compare
Atu3750 -0.6 -1.1 thiamine-phosphate pyrophosphorylase compare
Atu2239 -0.6 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3120 -0.6 -0.9 hypothetical protein compare
Atu2583 -0.6 -3.8 glycosyltransferase compare
Atu2548 -0.6 -4.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1638 -0.6 -2.2 hypothetical protein compare
Atu2640 -0.6 -2.0 hypothetical protein compare
Atu1850 -0.6 -1.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0189 -0.6 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu5114 -0.6 -1.6 hypothetical protein compare
Atu2465 -0.6 -1.9 two component sensor kinase compare
Atu2832 -0.6 -2.1 tRNA modification GTPase compare
Atu2127 -0.6 -2.7 L-carnitine dehydratase compare
Atu2352 -0.6 -1.4 hypothetical protein compare
Atu0501 -0.6 -4.1 acyl-CoA dehydrogenase compare
Atu1774 -0.6 -3.1 ABC transporter, substrate binding protein (peptide) compare
Atu1868 -0.6 -2.3 tRNA/rRNA methyltransferase compare
Atu3697 -0.6 -2.4 ATP-dependent protease LA 2 compare
Atu3267 -0.6 -2.5 dipeptide ABC transporter permease compare
Atu4897 -0.6 -1.5 hypothetical protein compare
Atu1904 -0.6 -1.8 transcriptional regulator compare
Atu8203 -0.6 -2.2 hypothetical protein compare
Atu0038 -0.6 -2.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2236 -0.6 -2.5 adenine phosphoribosyltransferase compare
Atu3668 -0.6 -2.1 siderophore biosynthesis protein compare
Atu4608 -0.6 -4.5 hypothetical protein compare
Atu8118 -0.6 -2.2 putative universal stress protein compare
Atu3517 -0.6 -3.5 acetyltransferase compare
Atu8190 -0.6 -3.2 hypothetical protein compare
Atu2286 -0.6 -1.1 hypothetical protein compare
Atu3121 -0.6 -0.5 cold shock protein compare
Atu1619 -0.5 -1.8 protein-export membrane protein SECG compare
Atu0386 -0.5 -1.1 hypothetical protein compare
Atu1534 -0.5 -2.9 cytochrome-c oxidase, FixP chain compare
Atu4346 -0.5 -3.3 hypothetical protein compare
Atu0332 -0.5 -2.5 RNA polymerase sigma-54 factor compare
Atu2692 -0.5 -1.5 intracellular septation protein compare
Atu4199 -0.5 -4.2 TetR family transcriptional regulator compare
Atu1462 -0.5 -3.6 glycine cleavage system protein P2 compare
Atu4093 -0.5 -1.7 hypothetical protein compare
Atu2592 -0.5 -2.3 hypothetical protein compare
Atu1777 -0.5 -1.9 hypothetical protein compare
Atu1874 -0.5 -0.9 RecA protein compare
Atu1620 -0.5 -3.7 triosephosphate isomerase compare
Atu4873 -0.5 -3.5 TetR family transcriptional regulator compare
Atu0973 -0.5 -2.6 cycH protein compare
Atu2650 -0.5 -3.7 glycerol-3-phosphate dehydrogenase compare
Atu0128 -0.5 -3.1 ABC transporter, membrane spanning protein (sugar/ribonucleotide) compare
Atu2757 -0.5 -1.9 nitrogen regulatory protein PII compare
Atu1530 -0.5 -3.0 nitrogen fixation protein FixG compare
Atu3545 -0.5 -2.3 hypothetical protein compare
Atu8180 -0.5 -1.9 hypothetical protein compare
Atu3678 -0.5 -1.8 siderophore biosynthesis protein compare
Atu0039 -0.5 -0.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu2133 -0.5 -3.2 hypothetical protein compare
Atu0211 -0.5 -2.6 hypothetical protein compare
Atu0861 -0.5 -2.0 hypothetical protein compare
Atu1285 -0.5 -2.7 metal dependent hydrolase compare
Atu1325 -0.5 -0.8 acetyltransferase compare
Atu5125 -0.5 -2.3 GntR family transcriptional regulator compare
Atu1439 -0.5 -1.3 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress Ticarcillin disodium salt in Agrobacterium fabrum C58

For stress Ticarcillin disodium salt across organisms