Experiment set5IT077 for Agrobacterium fabrum C58

Compare to:

R2A with Ceftriaxone disodium salt hemi(heptahydrate) 0.0005 mM

200 most important genes:

  gene name fitness t score description  
Atu2710 -6.1 -8.4 hypothetical protein compare
Atu0972 -4.5 -7.3 lipA protein compare
Atu1446 -4.4 -4.2 two component response regulator compare
Atu2590 -3.9 -9.7 hypothetical protein compare
Atu3469 -3.8 -3.5 phosphoglyceromutase compare
Atu4149 -3.3 -11.3 UDP-glucose 6-dehydrogenase compare
Atu4148 -3.1 -6.6 UDP-glucuronic acid epimerase compare
Atu2583 -3.0 -11.7 glycosyltransferase compare
Atu2582 -3.0 -7.3 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2584 -2.9 -5.1 hypothetical protein compare
Atu0421 -2.9 -2.2 ABC transporter, membrane spanning protein compare
Atu2591 -2.9 -8.0 glucosyltransferase compare
Atu2577 -2.8 -17.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu2289 -2.6 -12.1 anthranilate synthase component I and II compare
Atu1688 -2.6 -4.9 indole-3-glycerol-phosphate synthase compare
Atu0434 -2.5 -2.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0190 -2.4 -9.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0486 -2.4 -5.2 dihydroorotate dehydrogenase compare
Atu0298 -2.4 -5.5 orotidine 5 compare
Atu1774 -2.4 -8.7 ABC transporter, substrate binding protein (peptide) compare
Atu2592 -2.3 -6.1 hypothetical protein compare
Atu1687 -2.3 -5.1 anthranilate phosphoribosyltransferase compare
Atu0400 -2.3 -3.8 orotate phosphoribosyltransferase compare
Atu3712 -2.3 -2.6 hypothetical protein compare
Atu2585 -2.2 -5.5 hypothetical protein compare
Atu0399 -2.1 -6.7 dihydroorotase compare
Atu3077 -2.1 -10.7 beta-lactamase compare
Atu2692 -2.0 -5.9 intracellular septation protein compare
Atu0189 -1.9 -3.5 ABC transporter, membrane spanning protein (peptide) compare
Atu8180 -1.9 -6.6 hypothetical protein compare
Atu0346 -1.9 -4.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1075 -1.9 -5.3 amidophosphoribosyltransferase compare
Atu3078 -1.9 -7.1 LysR family transcriptional regulator compare
Atu1308 -1.9 -5.3 aspartate carbamoyl transferase catalytic subunit compare
Atu0647 -1.9 -5.5 phosphoribosylamine--glycine ligase compare
Atu1645 -1.9 -8.6 ABC transporter, substrate binding protein compare
Atu3739 -1.9 -2.7 phosphoglycerate kinase compare
Atu8161 -1.7 -2.6 hypothetical protein compare
Atu1149 -1.7 -2.4 adenylate cyclase compare
Atu1307 -1.7 -3.9 dihydroorotase compare
Atu3613 -1.7 -6.2 hypothetical protein compare
Atu1163 -1.7 -2.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3598 -1.7 -1.9 thiol:disulfide interchange protein compare
Atu4317 -1.6 -4.0 TetR family transcriptional regulator compare
Atu1028 -1.6 -3.5 hypothetical protein compare
Atu1686 -1.6 -9.2 peptidyl-prolyl cis-trans isomerse D compare
Atu1646 -1.6 -7.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1647 -1.6 -7.7 ABC transporter, membrane spanning protein compare
Atu3750 -1.6 -2.8 thiamine-phosphate pyrophosphorylase compare
Atu4616 -1.5 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu1445 -1.5 -5.9 two component sensor kinase compare
Atu1447 -1.5 -2.6 two component sensor kinase compare
Atu0184 -1.5 -3.2 glucokinase compare
Atu6098 -1.5 -1.0 transcriptional regulator, HTH family compare
Atu3754 -1.5 -7.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1373 -1.5 -7.4 hypothetical protein compare
Atu1644 -1.5 -3.4 hypothetical protein compare
Atu0025 -1.4 -2.5 hypothetical protein compare
Atu0017 -1.4 -2.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2640 -1.3 -4.6 hypothetical protein compare
Atu1099 -1.3 -5.7 hypothetical protein compare
Atu0756 -1.3 -5.2 phosphoglycerate mutase compare
Atu3698 -1.3 -2.7 thioredoxin compare
Atu2793 -1.3 -4.3 cobyrinic acid a,c-diamide synthase compare
Atu0687 -1.3 -2.8 hypothetical protein compare
Atu1140 -1.3 -4.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2802 -1.3 -5.3 precorrin-8X methylmutase compare
Atu0332 -1.2 -6.7 RNA polymerase sigma-54 factor compare
Atu3779 -1.2 -6.9 lytic murein transglycosylase compare
Atu1141 -1.2 -5.2 Phosphoribosylglycinamide synthetase compare
Atu3518 -1.2 -6.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0029 -1.2 -4.4 S-adenosylhomocysteine hydrolase compare
Atu1588 -1.2 -6.3 homoserine dehydrogenase compare
Atu4711 -1.2 -3.3 two component sensor kinase compare
Atu1131 -1.2 -6.3 outer membrane protein compare
Atu1468 -1.1 -5.4 hypothetical protein compare
Atu0422 -1.1 -1.5 ABC transporter, membrane spanning protein compare
Atu0103 -1.1 -6.4 penicillin-binding protein compare
Atu0185 -1.1 -3.7 methylglyoxal synthase compare
Atu2073 -1.1 -3.6 membrane protein compare
Atu2804 -1.1 -6.3 cobaltochelatase subunit compare
Atu2809 -1.1 -5.1 cobalamin biosynthesis protein compare
Atu0039 -1.1 -1.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu2832 -1.0 -3.2 tRNA modification GTPase compare
Atu1542 -1.0 -3.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2127 -1.0 -6.7 L-carnitine dehydratase compare
Atu1219 -1.0 -1.1 hypothetical protein compare
Atu1354 -1.0 -1.3 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0976 -1.0 -2.7 cycL protein compare
Atu0188 -1.0 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1685 -1.0 -1.0 hypothetical protein compare
Atu0295 -1.0 -2.7 hypothetical protein compare
Atu2799 -1.0 -4.5 precorrin-6x reductase compare
Atu3706 -1.0 -5.9 D-3-phosphoglycerate dehydrogenase compare
Atu5540 -1.0 -1.0 hypothetical protein compare
Atu1868 -0.9 -3.4 tRNA/rRNA methyltransferase compare
Atu3707 -0.9 -2.3 phosphoserine aminotransferase compare
Atu1845 -0.9 -3.1 phosphoribosylformylglycinamidine synthase I compare
Atu0767 -0.9 -3.6 cytochrome c oxidase subunit II compare
Atu8012 -0.9 -1.8 hypothetical protein compare
Atu2798 -0.9 -3.7 precorrin-6y methyltransferase compare
Atu4419 -0.9 -5.5 LysR family transcriptional regulator compare
Atu1904 -0.9 -2.8 transcriptional regulator compare
Atu3014 -0.9 -1.9 hypothetical protein compare
Atu1844 -0.9 -1.8 Phosphoribosylformylglycinamidine synthetase compare
Atu2040 -0.9 -3.8 phosphoserine phosphatase compare
Atu0845 -0.9 -3.4 hypothetical protein compare
Atu2805 -0.9 -3.8 cobalamin synthesis protein compare
Atu3481 -0.9 -2.4 enoyl-CoA hydratase compare
Atu0126 -0.9 -4.0 membrane lipoprotein compare
Atu1359 -0.8 -1.1 dnaK deletion suppressor protein compare
Atu3697 -0.8 -3.4 ATP-dependent protease LA 2 compare
Atu0142 -0.8 -1.3 cytochrome o ubiquinol oxidase subunit II compare
Atu2807 -0.8 -4.1 cob(I)alamin adenosyltransferase compare
Atu0886 -0.8 -1.5 hypothetical protein compare
Atu0038 -0.8 -3.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2796 -0.8 -3.0 precorrin-4 C11-methyltransferase compare
Atu0031 -0.8 -1.3 PTS system, IIA component compare
Atu0036 -0.8 -2.1 hypothetical protein compare
Atu1891 -0.8 -2.9 cobalamin biosynthesis protein compare
Atu0257 -0.8 -5.8 hypothetical protein compare
Atu0401 -0.8 -4.3 fructokinase compare
Atu2801 -0.8 -3.3 precorrin-2 C20 methyltransferase compare
Atu1737 -0.8 -1.9 hypothetical protein compare
Atu2800 -0.8 -2.3 precorrin-3B C17-methyltransferase compare
Atu3912 -0.8 -4.4 hypothetical protein compare
Atu1182 -0.8 -2.1 hypothetical protein compare
Atu2728 -0.8 -3.9 beta (1-->2) glucan export ATP-binding protein compare
Atu1620 -0.8 -5.0 triosephosphate isomerase compare
Atu1021 -0.8 -2.5 outer membrane protein compare
Atu2140 -0.8 -2.2 hypothetical protein compare
Atu1759 -0.8 -5.1 L-serine dehydratase compare
Atu3755 -0.8 -2.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1677 -0.8 -3.5 queuine tRNA-ribosyltransferase compare
Atu3763 -0.8 -1.3 hypothetical protein compare
Atu1836 -0.8 -2.0 hypothetical protein compare
Atu1515 -0.8 -3.5 hypothetical protein compare
Atu4617 -0.8 -4.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2205 -0.7 -4.0 transcriptional regulator, MarR family compare
Atu1030 -0.7 -1.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2795 -0.7 -3.6 cobalamin biosynthetic protein compare
Atu1850 -0.7 -2.1 phosphoribosylformylglycinamidine synthetase II compare
Atu1466 -0.7 -1.5 hypothetical protein compare
Atu1098 -0.7 -2.6 hypothetical protein compare
Atu2808 -0.7 -3.6 cobyric acid synthase compare
Atu0501 -0.7 -4.8 acyl-CoA dehydrogenase compare
Atu1463 -0.7 -3.5 glycine cleavage system component H compare
Atu3593 -0.7 -4.7 hypothetical protein compare
Atu4161 -0.7 -1.3 hypothetical protein compare
Atu6036 -0.7 -0.8 entry-exclusion protein compare
Atu2726 -0.7 -5.5 pyruvate carboxylase compare
Atu3496 -0.7 -3.1 hypothetical protein compare
Atu1679 -0.7 -1.3 peptidyl prolyl cis-trans isomerase compare
Atu1714 -0.7 -1.2 exonuclease III compare
Atu3008 -0.6 -0.8 hypothetical protein compare
Atu3668 -0.6 -2.4 siderophore biosynthesis protein compare
Atu5057 -0.6 -1.4 hypothetical protein compare
Atu3009 -0.6 -1.0 exopolysaccharide production protein compare
Atu0726 -0.6 -3.8 ring hydroxylating dioxygenase, alpha-subunit compare
Atu0535 -0.6 -1.8 hypothetical protein compare
Atu2787 -0.6 -0.7 hypothetical protein compare
Atu1779 -0.6 -1.5 hypothetical protein compare
Atu3913 -0.6 -4.2 biotin carboxylase compare
Atu2043 -0.6 -3.1 htrA family protein compare
Atu0565 -0.6 -2.3 hypothetical protein compare
Atu0272 -0.6 -1.9 transcriptional regulator, MarR family compare
Atu3910 -0.6 -2.9 LamB/YcsF family protein compare
Atu3519 -0.6 -3.2 peptidyl-prolyl cis-trans isomerase compare
Atu4674 -0.6 -3.7 GntR family transcriptional regulator compare
Atu5501 -0.6 -1.0 hypothetical protein compare
Atu0723 -0.6 -1.0 FAD dependent oxidoreductase compare
Atu2267 -0.6 -3.8 hypothetical protein compare
Atu1606 -0.6 -2.7 methionine aminopeptidase compare
Atu0769 -0.6 -1.0 protoheme IX farnesyltransferase compare
Atu4418 -0.6 -2.6 glutaryl-CoA dehydrogenase compare
Atu3353 -0.6 -4.1 mannose-1-phosphate guanylyltransferase compare
Atu0269 -0.6 -1.9 exodeoxyribonuclease VII large subunit compare
Atu8088 -0.6 -1.6 hypothetical protein compare
Atu2183 -0.6 -4.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3486 -0.6 -2.0 DeoR family transcriptional regulator compare
Atu2789 -0.6 -1.4 hypothetical protein compare
Atu6153 -0.6 -2.6 conserved hypothetical protein compare
Atu0129 -0.6 -4.7 ABC transporter, membrane spanning protein (sugar/ribonucleotide) compare
Atu4346 -0.6 -3.6 hypothetical protein compare
Atu3013 -0.6 -3.1 hypothetical protein compare
Atu2831 -0.6 -2.1 glucose inhibited division protein A compare
Atu0768 -0.6 -4.0 cytochrome-c oxidase chain I compare
Atu3144 -0.6 -3.4 GntR family transcriptional regulator compare
Atu1529 -0.6 -3.2 nitrogen fixation protein FixH compare
Atu1573 -0.6 -1.1 hypothetical protein compare
Atu8190 -0.6 -2.6 hypothetical protein compare
Atu0925 -0.6 -1.6 hypothetical protein compare
Atu4075 -0.6 -3.9 glycogen synthase compare
Atu2352 -0.6 -1.4 hypothetical protein compare
Atu2272 -0.6 -3.1 hypothetical protein compare
Atu4093 -0.6 -2.1 hypothetical protein compare
Atu3740 -0.6 -3.6 fructose bisphosphate aldolase compare
Atu0041 -0.6 -0.7 glutamine amidotransferase compare
Atu0594 -0.6 -3.4 alpha-glucosidase compare
Atu3026 -0.6 -3.3 short chain dehydrogenase compare


Specific Phenotypes

For 9 genes in this experiment

For stress Ceftriaxone disodium salt hemi(heptahydrate) in Agrobacterium fabrum C58

For stress Ceftriaxone disodium salt hemi(heptahydrate) across organisms