Experiment set5IT070 for Agrobacterium fabrum C58

Compare to:

R2A with Ceftazidime hydrate 4 mM

200 most important genes:

  gene name fitness t score description  
Atu2710 -5.8 -7.9 hypothetical protein compare
Atu0972 -4.8 -5.1 lipA protein compare
Atu3712 -4.1 -3.2 hypothetical protein compare
Atu3469 -3.4 -3.3 phosphoglyceromutase compare
Atu0017 -3.4 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1446 -3.1 -4.2 two component response regulator compare
Atu3634 -3.0 -5.6 penicillin-binding protein dacf precursor compare
Atu0723 -2.9 -3.5 FAD dependent oxidoreductase compare
Atu0298 -2.6 -7.2 orotidine 5 compare
Atu0400 -2.6 -4.2 orotate phosphoribosyltransferase compare
Atu2289 -2.5 -12.8 anthranilate synthase component I and II compare
Atu1646 -2.5 -7.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0399 -2.4 -6.6 dihydroorotase compare
Atu1645 -2.3 -9.4 ABC transporter, substrate binding protein compare
Atu3210 -2.3 -12.0 ftsk cell division protein compare
Atu1644 -2.3 -3.6 hypothetical protein compare
Atu3616 -2.2 -4.7 hypothetical protein compare
Atu1687 -2.2 -6.2 anthranilate phosphoribosyltransferase compare
Atu0486 -2.1 -6.5 dihydroorotate dehydrogenase compare
Atu1647 -2.1 -12.0 ABC transporter, membrane spanning protein compare
Atu1030 -2.1 -2.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4711 -1.9 -4.7 two component sensor kinase compare
Atu1307 -1.8 -5.2 dihydroorotase compare
Atu0421 -1.8 -1.9 ABC transporter, membrane spanning protein compare
Atu1140 -1.8 -6.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1075 -1.8 -7.1 amidophosphoribosyltransferase compare
Atu0434 -1.7 -3.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4108 -1.7 -7.8 ribonuclease D compare
Atu0346 -1.7 -3.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1308 -1.6 -3.6 aspartate carbamoyl transferase catalytic subunit compare
Atu1351 -1.6 -4.6 hypothetical protein compare
Atu1850 -1.6 -5.4 phosphoribosylformylglycinamidine synthetase II compare
Atu1688 -1.6 -3.9 indole-3-glycerol-phosphate synthase compare
Atu3754 -1.5 -4.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0647 -1.5 -5.8 phosphoribosylamine--glycine ligase compare
Atu4471 -1.5 -10.8 ABC transporter substrate-binding protein compare
Atu4470 -1.5 -6.8 iron ABC transporter ATPase compare
Atu1373 -1.5 -7.1 hypothetical protein compare
Atu4317 -1.5 -4.5 TetR family transcriptional regulator compare
Atu1163 -1.4 -2.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1845 -1.4 -3.6 phosphoribosylformylglycinamidine synthase I compare
Atu1141 -1.4 -4.4 Phosphoribosylglycinamide synthetase compare
Atu1021 -1.4 -2.7 outer membrane protein compare
Atu3755 -1.4 -4.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2584 -1.3 -4.1 hypothetical protein compare
Atu0422 -1.3 -2.2 ABC transporter, membrane spanning protein compare
Atu2582 -1.3 -3.9 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1254 -1.3 -2.6 transcriptional regulator, ArsR family compare
Atu2592 -1.3 -4.1 hypothetical protein compare
Atu4468 -1.3 -6.7 iron transport ABC transporter permease compare
Atu0257 -1.2 -8.1 hypothetical protein compare
Atu0051 -1.2 -4.8 two component sensor kinase compare
Atu0039 -1.2 -2.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu3706 -1.2 -5.0 D-3-phosphoglycerate dehydrogenase compare
Atu1182 -1.2 -2.4 hypothetical protein compare
Atu3727 -1.1 -2.7 hypothetical protein compare
Atu4166 -1.1 -1.6 UDP-glucose 4-epimerase compare
Atu1686 -1.1 -6.4 peptidyl-prolyl cis-trans isomerse D compare
Atu1028 -1.1 -2.0 hypothetical protein compare
Atu0565 -1.1 -3.0 hypothetical protein compare
Atu2304 -1.1 -6.6 bacteroid development protein compare
Atu4469 -1.1 -4.1 iron ABC transporter permease compare
Atu3517 -1.1 -4.5 acetyltransferase compare
Atu2590 -1.1 -5.6 hypothetical protein compare
Atu1131 -1.1 -4.8 outer membrane protein compare
Atu1810 -1.1 -1.4 hypothetical protein compare
Atu2133 -1.1 -5.9 hypothetical protein compare
Atu1619 -1.1 -3.0 protein-export membrane protein SECG compare
Atu4149 -1.1 -6.0 UDP-glucose 6-dehydrogenase compare
Atu5115 -1.1 -1.8 hypothetical protein compare
Atu1175 -1.1 -1.9 hypothetical protein compare
Atu3518 -1.0 -5.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2554 -1.0 -1.9 lysyl-tRNA synthetase compare
Atu0769 -1.0 -1.9 protoheme IX farnesyltransferase compare
Atu1679 -1.0 -3.0 peptidyl prolyl cis-trans isomerase compare
Atu1149 -1.0 -1.5 adenylate cyclase compare
Atu0050 -1.0 -4.4 two component response regulator compare
Atu2577 -1.0 -7.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1588 -1.0 -5.0 homoserine dehydrogenase compare
Atu1380 -1.0 -4.9 zinc metallopeptidase compare
Atu0920 -0.9 -4.1 hypothetical protein compare
Atu0029 -0.9 -3.2 S-adenosylhomocysteine hydrolase compare
Atu0777 -0.9 -0.9 hypothetical protein compare
Atu1709 -0.9 -4.3 glycosyl hydrolase compare
Atu1464 -0.9 -3.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu2441 -0.9 -1.3 RNA methylase compare
Atu1836 -0.9 -1.4 hypothetical protein compare
Atu2585 -0.9 -2.2 hypothetical protein compare
Atu2368 -0.9 -0.9 hypothetical protein compare
Atu2057 -0.8 -1.7 DNA helicase II compare
Atu3461 -0.8 -1.5 GntR family transcriptional regulator compare
Atu2640 -0.8 -3.2 hypothetical protein compare
Atu1891 -0.8 -2.1 cobalamin biosynthesis protein compare
Atu1705 -0.8 -3.6 SEC-independent protein translocase protein compare
Atu8147 -0.8 -4.8 hypothetical protein compare
Atu3353 -0.8 -5.2 mannose-1-phosphate guanylyltransferase compare
Atu0922 -0.8 -1.7 hypothetical protein compare
Atu1445 -0.8 -3.8 two component sensor kinase compare
Atu2267 -0.8 -3.3 hypothetical protein compare
Atu3707 -0.8 -2.6 phosphoserine aminotransferase compare
Atu1542 -0.8 -3.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2802 -0.8 -4.2 precorrin-8X methylmutase compare
Atu0184 -0.8 -1.2 glucokinase compare
Atu1844 -0.8 -1.4 Phosphoribosylformylglycinamidine synthetase compare
Atu8162 -0.8 -1.3 hypothetical protein compare
Atu0040 -0.8 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2591 -0.8 -3.0 glucosyltransferase compare
Atu0086 -0.8 -0.7 ribosome-binding factor A compare
Atu0162 -0.8 -3.0 biopolymer transport protein compare
Atu2270 -0.8 -0.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu2040 -0.8 -3.1 phosphoserine phosphatase compare
Atu2583 -0.7 -3.8 glycosyltransferase compare
Atu0036 -0.7 -1.7 hypothetical protein compare
Atu4615 -0.7 -5.0 glucose-1-phosphate thymidylyltransferase compare
Atu1110 -0.7 -1.8 cytosol aminopeptidase compare
Atu0353 -0.7 -3.7 acetyltransferase compare
Atu4148 -0.7 -2.1 UDP-glucuronic acid epimerase compare
Atu2113 -0.7 -1.8 N-acetylmuramoyl-L-alanine amidase compare
Atu2006 -0.7 -4.8 molecular chaperone, DnaJ family compare
Atu3763 -0.7 -1.1 hypothetical protein compare
Atu1468 -0.7 -3.9 hypothetical protein compare
Atu2801 -0.7 -2.2 precorrin-2 C20 methyltransferase compare
Atu0185 -0.7 -2.9 methylglyoxal synthase compare
Atu2067 -0.7 -0.7 hypothetical protein compare
Atu1503 -0.7 -0.9 hypothetical protein compare
Atu2043 -0.7 -3.8 htrA family protein compare
Atu2796 -0.7 -3.7 precorrin-4 C11-methyltransferase compare
Atu1495 -0.7 -1.5 hypothetical protein compare
Atu8019 -0.7 -2.1 hypothetical protein compare
Atu1463 -0.7 -2.7 glycine cleavage system component H compare
Atu5513 -0.7 -1.3 cold shock protein compare
Atu2800 -0.7 -1.2 precorrin-3B C17-methyltransferase compare
Atu0189 -0.7 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2799 -0.7 -2.7 precorrin-6x reductase compare
Atu4617 -0.7 -4.6 dTDP-D-glucose-4,6-dehydratase compare
Atu5010 -0.7 -2.0 hypothetical protein compare
Atu4873 -0.7 -3.1 TetR family transcriptional regulator compare
Atu0043 -0.7 -0.9 imidazoleglycerol-phosphate dehydratase compare
Atu2238 -0.7 -3.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4451 -0.7 -4.5 mannitol 2-dehydrogenase compare
Atu1513 -0.6 -2.6 ABC excinuclease subunit A compare
Atu1462 -0.6 -4.6 glycine cleavage system protein P2 compare
Atu5088 -0.6 -2.1 hypothetical protein compare
Atu2804 -0.6 -4.3 cobaltochelatase subunit compare
Atu1536 -0.6 -1.6 cytochrome C oxidase, FixO chain compare
Atu4199 -0.6 -3.5 TetR family transcriptional regulator compare
Atu0784 -0.6 -2.6 hypothetical protein compare
Atu1077 -0.6 -2.3 DNA repair protein compare
Atu2548 -0.6 -4.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3466 -0.6 -1.3 ArsR family transcriptional regulator compare
Atu3291 -0.6 -2.3 Lpr family transcriptional regulator compare
Atu0726 -0.6 -3.3 ring hydroxylating dioxygenase, alpha-subunit compare
Atu8145 -0.6 -2.9 hypothetical protein compare
Atu0678 -0.6 -2.7 histidyl-tRNA synthetase compare
Atu2809 -0.6 -3.9 cobalamin biosynthesis protein compare
Atu4477 -0.6 -3.0 TetR family transcriptional regulator compare
Atu1874 -0.6 -1.4 RecA protein compare
Atu6181 -0.6 -3.2 virA/G regulated topoisomerase compare
Atu2807 -0.6 -2.6 cob(I)alamin adenosyltransferase compare
Atu2808 -0.6 -3.0 cobyric acid synthase compare
Atu0971 -0.6 -2.5 two component sensor kinase compare
Atu0332 -0.6 -3.2 RNA polymerase sigma-54 factor compare
Atu1364 -0.6 -2.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0837 -0.6 -2.3 transcriptional regulator, MarR family compare
Atu3078 -0.6 -3.4 LysR family transcriptional regulator compare
Atu2205 -0.6 -2.9 transcriptional regulator, MarR family compare
Atu0062 -0.6 -2.5 transcriptional regulator, ROK family compare
Atu3126 -0.6 -2.7 hypothetical protein compare
Atu2555 -0.6 -1.5 L-lysine 2,3-aminomutase compare
Atu2504 -0.6 -2.6 transcriptional regulator, GntR family compare
Atu3740 -0.6 -2.6 fructose bisphosphate aldolase compare
Atu0845 -0.6 -2.3 hypothetical protein compare
Atu0501 -0.6 -4.0 acyl-CoA dehydrogenase compare
Atu1621 -0.6 -3.7 hypothetical protein compare
Atu1694 -0.6 -1.4 hypothetical protein compare
Atu1572 -0.6 -2.6 hydrolase compare
Atu8138 -0.6 -1.1 hypothetical protein compare
Atu3480 -0.6 -3.2 hydroxymethylglutaryl-CoA lyase compare
Atu0662 -0.6 -2.3 transcriptional regulator, GntR family compare
Atu0955 -0.5 -2.0 hypothetical protein compare
Atu0973 -0.5 -3.4 cycH protein compare
Atu8151 -0.5 -1.3 hypothetical protein compare
Atu4176 -0.5 -2.6 hypothetical protein compare
Atu0598 -0.5 -3.5 phosphogluconate dehydratase compare
Atu1968 -0.5 -1.2 hypothetical protein compare
Atu1708 -0.5 -3.3 hypothetical protein compare
Atu3507 -0.5 -1.9 hypothetical protein compare
Atu3481 -0.5 -1.9 enoyl-CoA hydratase compare
Atu3144 -0.5 -3.3 GntR family transcriptional regulator compare
Atu4766 -0.5 -2.3 hypothetical protein compare
Atu1447 -0.5 -0.9 two component sensor kinase compare
Atu4614 -0.5 -2.6 glycosyltransferase compare
Atu1782 -0.5 -2.3 hypothetical protein compare
Atu3017 -0.5 -0.7 phosphoglyceromutase compare
Atu1484 -0.5 -2.0 transcriptional regulator compare
Atu2286 -0.5 -0.9 hypothetical protein compare
Atu2766 -0.5 -4.3 NAD-glutamate dehydrogenase compare
Atu2746 -0.5 -1.4 hypothetical protein compare
Atu2803 -0.5 -1.8 Cobalamin biosynthesis associated protein compare
Atu1052 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

For 21 genes in this experiment

For stress Ceftazidime hydrate in Agrobacterium fabrum C58

For stress Ceftazidime hydrate across organisms