Experiment set5IT065 for Agrobacterium fabrum C58

Compare to:

R2A with Cephalothin sodium salt 0.9 mM

200 most important genes:

  gene name fitness t score description  
Atu2710 -6.2 -7.4 hypothetical protein compare
Atu0972 -5.4 -5.2 lipA protein compare
Atu0434 -4.1 -3.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu6098 -2.3 -1.3 transcriptional regulator, HTH family compare
Atu1687 -2.3 -7.2 anthranilate phosphoribosyltransferase compare
Atu2289 -2.3 -9.9 anthranilate synthase component I and II compare
Atu0298 -2.2 -7.2 orotidine 5 compare
Atu0486 -2.1 -4.7 dihydroorotate dehydrogenase compare
Atu3077 -2.0 -10.7 beta-lactamase conserved
Atu0346 -2.0 -4.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4149 -2.0 -7.2 UDP-glucose 6-dehydrogenase compare
Atu2577 -1.9 -13.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu3469 -1.9 -3.1 phosphoglyceromutase compare
Atu2592 -1.9 -5.2 hypothetical protein compare
Atu0190 -1.8 -8.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0399 -1.8 -5.5 dihydroorotase compare
Atu1307 -1.8 -5.1 dihydroorotase compare
Atu1688 -1.8 -4.8 indole-3-glycerol-phosphate synthase compare
Atu0421 -1.8 -2.0 ABC transporter, membrane spanning protein compare
Atu0400 -1.8 -3.6 orotate phosphoribosyltransferase compare
Atu1219 -1.7 -1.6 hypothetical protein compare
Atu3078 -1.7 -7.3 LysR family transcriptional regulator compare
Atu1149 -1.7 -1.3 adenylate cyclase compare
Atu4148 -1.6 -4.2 UDP-glucuronic acid epimerase compare
Atu1446 -1.6 -3.0 two component response regulator compare
Atu3750 -1.6 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu1308 -1.6 -6.1 aspartate carbamoyl transferase catalytic subunit compare
Atu3712 -1.5 -2.3 hypothetical protein compare
Atu2583 -1.5 -6.7 glycosyltransferase compare
Atu1774 -1.5 -7.3 ABC transporter, substrate binding protein (peptide) compare
Atu5164 -1.5 -1.3 type IV secretion protein AvhB3 compare
Atu0189 -1.5 -3.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0025 -1.4 -3.2 hypothetical protein compare
Atu0039 -1.4 -2.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu4317 -1.4 -3.3 TetR family transcriptional regulator compare
Atu2590 -1.4 -6.4 hypothetical protein compare
Atu2585 -1.4 -3.5 hypothetical protein compare
Atu2591 -1.4 -5.7 glucosyltransferase compare
Atu1686 -1.4 -9.3 peptidyl-prolyl cis-trans isomerse D compare
Atu1845 -1.3 -4.1 phosphoribosylformylglycinamidine synthase I compare
Atu1850 -1.3 -3.9 phosphoribosylformylglycinamidine synthetase II compare
Atu1588 -1.3 -6.8 homoserine dehydrogenase compare
Atu0647 -1.3 -5.1 phosphoribosylamine--glycine ligase compare
Atu1844 -1.2 -3.2 Phosphoribosylformylglycinamidine synthetase compare
Atu0598 -1.2 -6.1 phosphogluconate dehydratase compare
Atu0017 -1.2 -1.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0031 -1.2 -1.7 PTS system, IIA component compare
Atu0103 -1.2 -6.7 penicillin-binding protein compare
Atu1891 -1.1 -3.7 cobalamin biosynthesis protein compare
Atu8161 -1.1 -2.2 hypothetical protein compare
Atu2582 -1.1 -3.0 UDP-glucose/GDP-mannose dehydrogenase compare
Atu3754 -1.1 -5.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1021 -1.1 -2.7 outer membrane protein compare
Atu1028 -1.1 -2.7 hypothetical protein compare
Atu1030 -1.1 -1.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1141 -1.1 -5.6 Phosphoribosylglycinamide synthetase compare
Atu1373 -1.1 -5.7 hypothetical protein compare
Atu0184 -1.1 -1.8 glucokinase compare
Atu3634 -1.0 -2.9 penicillin-binding protein dacf precursor compare
Atu1566 -1.0 -1.5 hypothetical protein compare
Atu2805 -1.0 -3.6 cobalamin synthesis protein compare
Atu2584 -1.0 -3.1 hypothetical protein compare
Atu0188 -1.0 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu4773 -1.0 -2.1 two component response regulator compare
Atu4711 -1.0 -4.1 two component sensor kinase compare
Atu3706 -1.0 -4.4 D-3-phosphoglycerate dehydrogenase compare
Atu4166 -1.0 -2.5 UDP-glucose 4-epimerase compare
Atu1131 -1.0 -5.0 outer membrane protein compare
Atu1447 -1.0 -2.5 two component sensor kinase compare
Atu2799 -1.0 -4.1 precorrin-6x reductase compare
Atu2793 -1.0 -3.2 cobyrinic acid a,c-diamide synthase compare
Atu1542 -1.0 -3.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1140 -0.9 -4.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5451 -0.9 -1.4 hypothetical protein compare
Atu0977 -0.9 -3.1 serine protease DO-like protease compare
Atu1075 -0.9 -4.0 amidophosphoribosyltransferase compare
Atu1810 -0.9 -1.5 hypothetical protein compare
Atu1646 -0.9 -4.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2728 -0.9 -3.7 beta (1-->2) glucan export ATP-binding protein compare
Atu1254 -0.9 -1.6 transcriptional regulator, ArsR family compare
Atu2802 -0.9 -4.6 precorrin-8X methylmutase compare
Atu2800 -0.9 -3.6 precorrin-3B C17-methyltransferase compare
Atu2554 -0.9 -1.7 lysyl-tRNA synthetase compare
Atu0976 -0.9 -2.7 cycL protein compare
Atu3707 -0.9 -2.5 phosphoserine aminotransferase compare
Atu1163 -0.8 -1.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3727 -0.8 -3.0 hypothetical protein compare
Atu1127 -0.8 -1.6 molybdopterin converting factor small subunit compare
Atu1644 -0.8 -3.3 hypothetical protein compare
Atu2040 -0.8 -3.5 phosphoserine phosphatase compare
Atu8138 -0.8 -1.5 hypothetical protein compare
Atu0769 -0.8 -1.6 protoheme IX farnesyltransferase compare
Atu3210 -0.8 -6.0 ftsk cell division protein compare
Atu1445 -0.8 -3.6 two component sensor kinase compare
Atu4616 -0.8 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu1327 -0.8 -2.8 NADH-ubiquinone oxidoreductase compare
Atu0687 -0.8 -1.2 hypothetical protein compare
Atu2803 -0.8 -2.6 Cobalamin biosynthesis associated protein compare
Atu2809 -0.8 -4.3 cobalamin biosynthesis protein compare
Atu3486 -0.8 -1.6 DeoR family transcriptional regulator compare
Atu1677 -0.8 -2.4 queuine tRNA-ribosyltransferase compare
Atu0846 -0.8 -2.6 transcriptional regulator, MarR family compare
Atu4161 -0.8 -1.7 hypothetical protein compare
Atu3518 -0.7 -5.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2796 -0.7 -2.8 precorrin-4 C11-methyltransferase compare
Atu1103 -0.7 -1.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu5043 -0.7 -3.2 hypothetical protein compare
Atu0331 -0.7 -2.2 sigma-54 modulation protein compare
Atu0029 -0.7 -2.6 S-adenosylhomocysteine hydrolase compare
Atu3763 -0.7 -1.1 hypothetical protein compare
Atu6036 -0.7 -0.6 entry-exclusion protein compare
Atu0886 -0.7 -1.4 hypothetical protein compare
Atu8087 -0.7 -1.0 putative peptidoglycan binding protein compare
Atu8056 -0.7 -1.0 hypothetical protein compare
Atu3515 -0.7 -1.8 hypothetical protein compare
Atu1359 -0.7 -0.9 dnaK deletion suppressor protein compare
Atu0101 -0.7 -1.8 cytochrome c compare
Atu1110 -0.7 -2.2 cytosol aminopeptidase compare
Atu0422 -0.7 -1.1 ABC transporter, membrane spanning protein compare
Atu2640 -0.7 -3.0 hypothetical protein compare
Atu3353 -0.7 -4.6 mannose-1-phosphate guanylyltransferase compare
Atu1435 -0.7 -1.8 hypothetical protein compare
Atu2133 -0.7 -3.7 hypothetical protein compare
Atu1725 -0.7 -2.4 hypothetical protein compare
Atu4617 -0.7 -4.4 dTDP-D-glucose-4,6-dehydratase compare
Atu3739 -0.7 -1.9 phosphoglycerate kinase compare
Atu3311 -0.7 -5.1 phosphomannose isomerase compare
Atu1444 -0.7 -2.4 nitrogen regulation protein compare
Atu2183 -0.6 -3.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0726 -0.6 -3.9 ring hydroxylating dioxygenase, alpha-subunit compare
Atu1645 -0.6 -3.9 ABC transporter, substrate binding protein compare
Atu0038 -0.6 -2.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3045 -0.6 -2.1 hypothetical protein compare
Atu5115 -0.6 -1.1 hypothetical protein compare
Atu1351 -0.6 -3.6 hypothetical protein compare
Atu2052 -0.6 -3.0 hypothetical protein compare
Atu1503 -0.6 -0.9 hypothetical protein compare
Atu4615 -0.6 -4.2 glucose-1-phosphate thymidylyltransferase compare
Atu0269 -0.6 -2.4 exodeoxyribonuclease VII large subunit compare
Atu1364 -0.6 -2.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2804 -0.6 -4.4 cobaltochelatase subunit compare
Atu2043 -0.6 -3.0 htrA family protein compare
Atu8180 -0.6 -3.0 hypothetical protein compare
Atu4614 -0.6 -4.0 glycosyltransferase compare
Atu2270 -0.6 -1.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu0051 -0.6 -2.8 two component sensor kinase compare
Atu3593 -0.6 -3.8 hypothetical protein compare
Atu0185 -0.6 -2.1 methylglyoxal synthase compare
Atu1573 -0.6 -1.2 hypothetical protein compare
Atu2238 -0.6 -3.9 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4618 -0.6 -4.3 dTDP-rhamnose-3,5-epimerase compare
Atu4144 -0.6 -0.8 hypothetical protein compare
Atu3496 -0.6 -2.6 hypothetical protein compare
Atu2036 -0.6 -4.6 acetolactate synthase III, large subunit compare
Atu4108 -0.6 -3.6 ribonuclease D compare
Atu3120 -0.6 -0.8 hypothetical protein compare
Atu2798 -0.6 -2.8 precorrin-6y methyltransferase compare
Atu2831 -0.6 -2.9 glucose inhibited division protein A compare
Atu2772 -0.6 -2.3 Invasion protein A compare
Atu2432 -0.6 -1.6 hypothetical protein compare
Atu0211 -0.6 -2.8 hypothetical protein compare
Atu8118 -0.6 -2.9 putative universal stress protein compare
Atu6114 -0.6 -1.0 hypothetical protein compare
Atu2832 -0.6 -1.8 tRNA modification GTPase compare
Atu2746 -0.6 -1.7 hypothetical protein compare
Atu4897 -0.6 -1.3 hypothetical protein compare
Atu2249 -0.6 -0.8 hypothetical protein compare
Atu2650 -0.5 -3.2 glycerol-3-phosphate dehydrogenase compare
Atu0230 -0.5 -1.3 hypothetical protein compare
Atu2237 -0.5 -1.9 cytochrome c1 compare
Atu2294 -0.5 -2.7 aminoglycoside N6'-acetyltransferase compare
Atu5468 -0.5 -1.4 hypothetical protein compare
Atu0771 -0.5 -2.8 cytochrome c oxidase subunit III compare
Atu4313 -0.5 -2.0 sarcosine oxidase gamma subunit compare
Atu1495 -0.5 -1.9 hypothetical protein compare
Atu2795 -0.5 -2.7 cobalamin biosynthetic protein compare
Atu4075 -0.5 -3.2 glycogen synthase compare
Atu1620 -0.5 -3.4 triosephosphate isomerase compare
Atu3289 -0.5 -2.1 thiamine-phosphate pyrophosphorylase compare
Atu0698 -0.5 -2.0 hypothetical protein compare
Atu2808 -0.5 -2.6 cobyric acid synthase compare
Atu2692 -0.5 -2.4 intracellular septation protein compare
Atu0225 -0.5 -0.6 hypothetical protein compare
Atu1902 -0.5 -2.2 transketolase compare
Atu3776 -0.5 -2.2 hypothetical protein compare
Atu2807 -0.5 -2.8 cob(I)alamin adenosyltransferase compare
Atu3578 -0.5 -2.2 glycerol-3-phosphate dehydrogenase compare
Atu4613 -0.5 -3.4 glycosyltransferase compare
Atu3644 -0.5 -1.8 hypothetical protein compare
Atu1737 -0.5 -1.0 hypothetical protein compare
Atu1301 -0.5 -1.6 hypothetical protein compare
Atu8190 -0.5 -2.1 hypothetical protein compare
Atu0727 -0.5 -3.2 ferredoxin I compare
Atu3755 -0.5 -2.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0677 -0.5 -1.3 hypothetical protein compare
Atu5501 -0.5 -1.7 hypothetical protein compare
Atu8176 -0.5 -1.1 hypothetical protein compare
Atu1380 -0.5 -2.6 zinc metallopeptidase compare
Atu0257 -0.5 -3.1 hypothetical protein compare
Atu2504 -0.5 -3.3 transcriptional regulator, GntR family compare


Specific Phenotypes

For 2 genes in this experiment

For stress Cephalothin sodium salt in Agrobacterium fabrum C58

For stress Cephalothin sodium salt across organisms