Experiment set5IT064 for Agrobacterium fabrum C58

Compare to:

R2A with Vancomycin Hydrochloride Hydrate 0.009 mM

200 most important genes:

  gene name fitness t score description  
Atu1619 -6.3 -3.6 protein-export membrane protein SECG compare
Atu3712 -5.7 -3.2 hypothetical protein compare
Atu2710 -5.5 -6.5 hypothetical protein compare
Atu0972 -5.4 -6.7 lipA protein compare
Atu0220 -5.3 -7.5 components of type IV pilus compare
Atu0486 -5.0 -6.9 dihydroorotate dehydrogenase compare
Atu0687 -4.8 -3.8 hypothetical protein compare
Atu8167 -4.8 -15.1 putative transmembrane protein compare
Atu1175 -4.7 -2.2 hypothetical protein compare
Atu0399 -4.6 -7.7 dihydroorotase compare
Atu4072 -4.5 -3.0 nodulation protein N compare
Atu0097 -4.5 -7.9 hypothetical protein conserved
Atu2616 -4.4 -12.2 hypothetical protein compare
Atu0598 -4.4 -9.8 phosphogluconate dehydratase compare
Atu1308 -4.3 -6.0 aspartate carbamoyl transferase catalytic subunit compare
Atu0755 -4.3 -4.8 hypothetical protein compare
Atu2207 -4.2 -5.0 two component sensor kinase compare
Atu0298 -4.1 -8.4 orotidine 5 compare
Atu4610 -4.1 -14.1 sugar nucleotide epimerase/dehydratase compare
Atu0723 -4.1 -2.8 FAD dependent oxidoreductase compare
Atu1307 -4.1 -5.7 dihydroorotase compare
Atu4614 -4.1 -9.0 glycosyltransferase compare
Atu1355 -4.0 -9.9 hypothetical protein compare
Atu2183 -4.0 -13.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2084 -3.9 -1.3 hypothetical protein compare
Atu4618 -3.9 -12.1 dTDP-rhamnose-3,5-epimerase compare
Atu4617 -3.9 -11.2 dTDP-D-glucose-4,6-dehydratase compare
Atu1687 -3.8 -5.2 anthranilate phosphoribosyltransferase compare
Atu2379 -3.8 -12.3 phosphomannomutase compare
Atu3311 -3.8 -17.2 phosphomannose isomerase compare
Atu1360 -3.7 -13.7 hypothetical protein compare
Atu2615 -3.7 -10.6 hypothetical protein compare
Atu4613 -3.7 -15.3 glycosyltransferase compare
Atu4615 -3.7 -9.2 glucose-1-phosphate thymidylyltransferase compare
Atu3353 -3.6 -12.5 mannose-1-phosphate guanylyltransferase compare
Atu3763 -3.6 -2.8 hypothetical protein compare
Atu1021 -3.6 -3.0 outer membrane protein compare
Atu0759 -3.6 -11.9 hypothetical protein compare
Atu0920 -3.5 -3.7 hypothetical protein compare
Atu3518 -3.5 -9.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2722 -3.4 -10.3 porin compare
Atu2504 -3.4 -9.1 transcriptional regulator, GntR family compare
Atu2205 -3.4 -4.0 transcriptional regulator, MarR family compare
Atu1028 -3.4 -2.3 hypothetical protein compare
Atu1850 -3.3 -4.5 phosphoribosylformylglycinamidine synthetase II compare
Atu1677 -3.3 -6.3 queuine tRNA-ribosyltransferase compare
Atu4608 -3.2 -14.5 hypothetical protein compare
Atu1686 -3.2 -12.3 peptidyl-prolyl cis-trans isomerse D compare
Atu3739 -3.2 -3.0 phosphoglycerate kinase compare
Atu0211 -3.2 -12.5 hypothetical protein compare
Atu3469 -3.2 -2.2 phosphoglyceromutase compare
Atu4609 -3.1 -13.7 glycosyltransferase compare
Atu2289 -3.1 -13.1 anthranilate synthase component I and II compare
Atu0400 -3.1 -4.1 orotate phosphoribosyltransferase compare
Atu1163 -3.1 -2.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0103 -3.0 -5.9 penicillin-binding protein compare
Atu2045 -3.0 -8.1 HFLK protein compare
Atu0184 -3.0 -2.8 glucokinase compare
Atu2824 -3.0 -6.9 hypothetical protein compare
Atu4075 -3.0 -8.3 glycogen synthase compare
Atu4451 -2.9 -6.7 mannitol 2-dehydrogenase compare
Atu2044 -2.9 -5.6 HFLC protein compare
Atu4616 -2.9 -2.0 dTDP-4-dehydrorhamnose reductase compare
Atu0026 -2.8 -1.3 hypothetical protein compare
Atu0576 -2.8 -10.0 flagellar hook-associated protein compare
Atu1447 -2.8 -2.4 two component sensor kinase compare
Atu2746 -2.8 -5.8 hypothetical protein compare
Atu3517 -2.7 -5.4 acetyltransferase compare
Atu3750 -2.7 -4.0 thiamine-phosphate pyrophosphorylase compare
Atu2040 -2.7 -5.9 phosphoserine phosphatase compare
Atu0017 -2.7 -1.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0008 -2.7 -7.0 hypothetical protein compare
Atu0302 -2.6 -8.5 tetrapyrrole methylase family protein compare
Atu1844 -2.4 -3.0 Phosphoribosylformylglycinamidine synthetase compare
Atu1588 -2.4 -7.9 homoserine dehydrogenase compare
Atu4606 -2.4 -9.6 hypothetical protein compare
Atu2409 -2.4 -8.7 hypothetical protein compare
Atu4166 -2.4 -2.7 UDP-glucose 4-epimerase compare
Atu1614 -2.4 -8.4 phosphoglycolate phosphatase compare
Atu0185 -2.3 -3.7 methylglyoxal synthase compare
Atu1709 -2.2 -8.3 glycosyl hydrolase compare
Atu2166 -2.2 -6.4 hypothetical protein compare
Atu1103 -2.2 -1.6 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1141 -2.2 -5.4 Phosphoribosylglycinamide synthetase compare
Atu1845 -2.2 -5.1 phosphoribosylformylglycinamidine synthase I compare
Atu4477 -2.1 -7.3 TetR family transcriptional regulator compare
Atu2614 -2.1 -6.1 hypothetical protein compare
Atu0650 -2.1 -8.6 hypothetical protein compare
Atu2555 -2.1 -5.0 L-lysine 2,3-aminomutase compare
Atu1868 -2.1 -5.1 tRNA/rRNA methyltransferase compare
Atu3727 -2.1 -4.7 hypothetical protein compare
Atu1688 -2.1 -3.7 indole-3-glycerol-phosphate synthase compare
Atu4148 -2.1 -4.3 UDP-glucuronic acid epimerase compare
Atu2368 -2.0 -1.6 hypothetical protein compare
Atu3485 -2.0 -8.8 short chain dehydrogenase compare
Atu5160 -2.0 -3.9 transcriptional regulator protein compare
Atu0647 -2.0 -8.3 phosphoribosylamine--glycine ligase compare
Atu0788 -2.0 -5.2 hypothetical protein compare
Atu0977 -2.0 -4.7 serine protease DO-like protease compare
Atu0579 -2.0 -7.4 hook formation protein compare
Atu3754 -2.0 -3.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2832 -2.0 -3.8 tRNA modification GTPase compare
Atu1852 -1.9 -7.4 hypothetical protein compare
Atu0574 -1.9 -9.8 flagellar hook protein compare
Atu0401 -1.9 -5.1 fructokinase compare
Atu0434 -1.9 -2.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2005 -1.8 -7.4 hypothetical protein compare
Atu0876 -1.8 -1.6 superoxide dismutase compare
Atu1127 -1.8 -2.8 molybdopterin converting factor small subunit compare
Atu2127 -1.8 -5.2 L-carnitine dehydratase compare
Atu0030 -1.8 -1.6 phosphocarrier protein HPr compare
Atu3755 -1.8 -4.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2511 -1.8 -7.6 D-alanine aminotransferase compare
Atu1874 -1.7 -2.4 RecA protein compare
Atu1678 -1.7 -4.8 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu0577 -1.7 -4.2 FLAF protein compare
Atu3005 -1.7 -1.4 hypothetical protein compare
Atu1351 -1.7 -6.9 hypothetical protein compare
Atu0405 -1.7 -11.0 long-chain-fatty-acid-CoA-ligase conserved
Atu0025 -1.7 -2.0 hypothetical protein compare
Atu8138 -1.7 -1.9 hypothetical protein compare
Atu2113 -1.7 -2.6 N-acetylmuramoyl-L-alanine amidase compare
Atu2124 -1.7 -5.8 transcriptional regulator, ArsR family compare
Atu3707 -1.7 -3.2 phosphoserine aminotransferase compare
Atu0569 -1.6 -7.3 flagellar motor protein, PAL/OmpA family compare
Atu2585 -1.6 -4.0 hypothetical protein compare
Atu0659 -1.5 -3.8 NTP pyrophosphohydrolase, MutT family compare
Atu0137 -1.5 -5.7 phosphopentomutase compare
Atu2582 -1.5 -3.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2577 -1.5 -10.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu1075 -1.5 -5.8 amidophosphoribosyltransferase compare
Atu8131 -1.5 -10.4 pH adaption potassium efflux system protein compare
Atu0135 -1.5 -2.6 uracil phosphoribosyltransferase compare
Atu8129 -1.5 -6.1 hypothetical protein compare
Atu0152 -1.5 -2.3 hypothetical protein compare
Atu4063 -1.5 -5.7 O-linked GlcNAc transferase compare
Atu1099 -1.5 -5.8 hypothetical protein compare
Atu1685 -1.4 -0.9 hypothetical protein compare
Atu1140 -1.4 -4.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0212 -1.4 -5.6 hypothetical protein compare
Atu4674 -1.4 -6.2 GntR family transcriptional regulator compare
Atu0801 -1.4 -8.7 chromosome segregation protein compare
Atu8159 -1.4 -3.0 hypothetical protein compare
Atu1767 -1.4 -7.5 transcriptional regulator, AraC family compare
Atu0585 -1.4 -2.4 hypothetical protein compare
Atu4471 -1.4 -6.8 ABC transporter substrate-binding protein compare
Atu0565 -1.4 -3.5 hypothetical protein compare
Atu2684 -1.4 -1.1 hypothetical protein compare
Atu2584 -1.4 -3.7 hypothetical protein compare
Atu0328 -1.4 -8.0 heat-inducible transcription repressor compare
Atu0510 -1.4 -5.9 pH adaption potassium efflux system protein compare
Atu2766 -1.4 -9.9 NAD-glutamate dehydrogenase compare
Atu8130 -1.4 -6.2 hypothetical protein compare
Atu1708 -1.3 -4.7 hypothetical protein compare
Atu2724 -1.3 -7.7 MFS permease conserved
Atu0295 -1.3 -1.7 hypothetical protein compare
Atu0498 -1.3 -6.3 hypothetical protein compare
Atu0570 -1.3 -8.0 Chemotaxis protein compare
Atu1784 -1.3 -6.1 hypothetical protein compare
Atu1847 -1.3 -1.6 hypothetical protein compare
Atu1149 -1.3 -1.5 adenylate cyclase compare
Atu2770 -1.3 -4.8 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu4223 -1.3 -1.8 sarcosine oxidase delta subunit compare
Atu1810 -1.3 -1.4 hypothetical protein compare
Atu1130 -1.3 -4.6 dehydrogenase compare
Atu0824 -1.2 -1.1 hypothetical protein compare
Atu3935 -1.2 -8.7 N-formimino-L-glutamate deiminase compare
Atu1867 -1.2 -4.5 glutamate racemase compare
Atu2831 -1.2 -3.4 glucose inhibited division protein A compare
Atu3706 -1.2 -3.9 D-3-phosphoglycerate dehydrogenase compare
Atu1827 -1.2 -6.6 hypothetical protein compare
Atu0549 -1.2 -3.1 hypothetical protein compare
Atu0803 -1.2 -7.8 pyruvate,orthophosphate dikinase compare
Atu5516 -1.2 -9.1 hypothetical protein compare
Atu0249 -1.2 -6.4 ABC transporter, substrate binding protein (sugar) conserved
Atu0332 -1.2 -5.2 RNA polymerase sigma-54 factor compare
Atu0485 -1.2 -2.0 hypothetical protein compare
Atu2554 -1.2 -1.3 lysyl-tRNA synthetase compare
Atu1572 -1.2 -5.7 hydrolase compare
Atu0922 -1.2 -3.0 hypothetical protein compare
Atu4173 -1.2 -2.1 phosphoenolpyruvate-protein phosphotransferase compare
Atu1131 -1.2 -4.3 outer membrane protein compare
Atu2548 -1.2 -7.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2450 -1.1 -2.0 hypothetical protein compare
Atu0344 -1.1 -4.2 hypothetical protein compare
Atu0845 -1.1 -3.4 hypothetical protein compare
Atu0356 -1.1 -7.0 miaB protein compare
Atu2464 -1.1 -2.2 formyltetrahydrofolate deformylase compare
Atu0290 -1.1 -4.9 rare lipoprotein A compare
Atu2821 -1.1 -2.8 transcriptional regulator, GntR family compare
Atu3519 -1.1 -3.9 peptidyl-prolyl cis-trans isomerase compare
Atu1707 -1.1 -6.0 hypothetical protein compare
Atu2209 -1.1 -3.0 pyrroline-5-carboxylate reductase compare
Atu0435 -1.1 -2.0 tRNA-Gly compare
Atu2787 -1.1 -1.0 hypothetical protein compare
Atu6098 -1.1 -0.7 transcriptional regulator, HTH family compare
Atu4522 -1.1 -5.7 hypothetical protein compare
Atu2608 -1.1 -4.1 N-acetylglucosamine-6-phosphate deacetylase compare
Atu0578 -1.1 -2.6 FlbT post-transcriptional regulator of flagellin compare
Atu4108 -1.1 -6.3 ribonuclease D compare


Specific Phenotypes

For 134 genes in this experiment

For stress Vancomycin Hydrochloride Hydrate in Agrobacterium fabrum C58

For stress Vancomycin Hydrochloride Hydrate across organisms